Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104114816 . T A CCDS782.1:NM_020978.4:c.253Tgc>Agc_NP_066188.1:p.85C>S Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 CYS A:70 A:70 26.0 0.193 -142.1 102.1 26.0 0.193 0.0 HOH
3.504
N
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 CYS A:70 A:70 25.0 0.185 -145.8 102.4 25.0 0.185 0.0 HOH
3.524
N
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 CYS A:70 A:70 25.0 0.185 -143.4 98.5 25.0 0.185 0.0 HOH
3.484
SG
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 CYS A:70 A:70 25.0 0.185 -142.8 103.8 25.0 0.185 0.0 HOH
3.602
N
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 CYS A:70 A:70 22.0 0.163 -152.3 103.3 22.0 0.163 0.0 HOH
3.115
HB2
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 CYS A:70 A:70 28.0 0.207 -148.2 101.2 28.0 0.207 0.0 HOH
4.086
CB
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 CYS A:70 A:70 27.0 0.2 -145.5 103.6 27.0 0.2 0.0 HOH
3.621
N
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 CYS A:70 A:70 27.0 0.2 -153.9 100.6 27.0 0.2 0.0 HOH
3.365
N
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 CYS A:70 A:70 27.0 0.2 -150.0 106.1 27.0 0.2 0.0 HOH
3.529
N
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 CYS A:70 A:70 27.0 0.2 -151.0 103.0 27.0 0.2 0.0 HOH
3.502
N
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 CYS A:70 A:70 25.0 0.185 -152.2 95.6 25.0 0.185 0.0 HOH
3.537
N
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 CYS A:70 A:70 25.0 0.185 -146.2 98.6 25.0 0.185 0.0 HOH
3.473
N
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 CYS A:70 A:70 26.0 0.193 -157.6 104.3 26.0 0.193 0.0 HOH
3.404
N
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 CYS A:70 A:70 27.0 0.2 -146.7 103.2 27.0 0.2 0.0 HOH
3.598
N
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 CYS A:70 A:70 26.0 0.193 -150.6 101.9 26.0 0.193 0.0 HOH
3.501
N
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 CYS A:70 A:70 25.0 0.185 -146.8 102.1 25.0 0.185 0.0 HOH
3.528
N
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 CYS A:70 A:70 26.0 0.193 -143.5 95.4 26.0 0.193 0.0 HOH
3.345
CB
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 CYS A:70 A:70 24.0 0.178 -146.5 103.6 24.0 0.178 0.0 HOH
3.472
N
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 CYS A:70 A:70 26.0 0.193 -151.5 102.4 26.0 0.193 0.0 HOH
3.426
SG
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 CYS A:70 A:70 25.0 0.185 -149.5 101.7 25.0 0.185 0.0 HOH
3.446
N
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 CYS A:70 A:70 25.0 0.185 -144.4 101.1 25.0 0.185 0.0 HOH
3.522
N
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 CYS A:70 A:70 24.0 0.178 -139.9 103.2 24.0 0.178 0.0 HOH
3.593
N
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 CYS A:70 A:70 25.0 0.185 -141.9 100.8 25.0 0.185 0.0 HOH
3.637
N
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 CYS A:70 A:70 24.0 0.178 -142.2 102.9 24.0 0.178 0.0 HOH
3.569
N
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 CYS A:70 A:70 23.0 0.17 -155.0 101.0 23.0 0.17 0.0 HOH
3.532
N
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 CYS A:70 A:70 23.0 0.17 -148.3 100.1 23.0 0.17 0.0 HOH
3.495
N
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 CYS A:70 A:70 22.0 0.163 -148.0 104.0 22.0 0.163 0.0 HOH
3.362
SG
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 CYS A:70 A:70 23.0 0.17 -149.9 99.1 23.0 0.17 0.0 HOH
3.157
SG
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 CYS A:70 A:70 23.0 0.17 -146.1 100.7 23.0 0.17 0.0 HOH
2.905
HB2
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 CYS A:70 A:70 23.0 0.17 -151.0 99.2 23.0 0.17 0.0 HOH
3.354
SG
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 CYS A:70 A:70 23.0 0.17 -148.0 101.9 23.0 0.17 0.0 HOH
3.439
N
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 CYS A:70 A:70 23.0 0.17 -150.6 98.5 23.0 0.17 0.0 HOH
3.253
HB2
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 CYS A:70 A:70 22.0 0.163 -153.1 101.5 22.0 0.163 0.0 HOH
4.362
SG
O
CYS B:70 B:70 24.0 0.178 -153.0 100.7 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 CYS A:70 A:70 24.0 0.178 -147.8 102.5 24.0 0.178 0.0 HOH
3.309
HA
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 CYS A:70 A:70 24.0 0.178 -148.5 99.9 24.0 0.178 0.0 HOH
3.328
HA
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 CYS A:70 A:70 27.0 0.2 -151.0 104.5 27.0 0.2 0.0 HOH
3.477
N
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 CYS A:70 A:70 25.0 0.185 -151.3 103.1 25.0 0.185 0.0 HOH
3.569
N
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 CYS A:70 A:70 27.0 0.2 -143.6 105.0 27.0 0.2 0.0 HOH
3.507
N
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 CYS A:70 A:70 25.0 0.185 -147.8 102.5 25.0 0.185 0.0 HOH
3.468
N
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 CYS A:70 A:70 25.0 0.185 -148.7 102.2 25.0 0.185 0.0 HOH
3.508
N
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 CYS A:70 A:70 25.0 0.185 -145.0 102.0 25.0 0.185 0.0 HOH
3.412
SG
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 CYS A:70 A:70 28.0 0.207 -148.2 105.1 28.0 0.207 0.0 HOH
3.501
N
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 CYS A:70 A:70 27.0 0.2 -141.5 99.8 27.0 0.2 0.0 HOH
3.652
N
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 CYS A:70 A:70 27.0 0.2 -145.0 99.2 27.0 0.2 0.0 HOH
3.530
N
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 CYS A:70 A:70 28.0 0.207 -139.3 98.1 28.0 0.207 0.0 HOH
3.709
N
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 CYS A:70 A:70 25.0 0.185 -154.6 94.7 25.0 0.185 0.0 GLC
HOH
9.133
3.414
SG
N
O5
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 CYS A:70 A:70 26.0 0.193 -140.1 103.2 26.0 0.193 0.0 HOH
3.662
N
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 CYS A:70 A:70 25.0 0.185 -147.4 102.8 25.0 0.185 0.0 HOH
3.609
N
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 CYS A:70 A:70 25.0 0.185 -142.8 99.0 25.0 0.185 0.0 HOH
3.599
N
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 CYS A:70 A:70 27.0 0.2 -142.0 102.1 27.0 0.2 0.0 HOH
3.581
N
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 CYS A:70 A:70 26.0 0.193 -148.6 101.5 26.0 0.193 0.0 HOH
3.514
N
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 CYS A:70 A:70 28.0 0.207 -136.5 104.6 28.0 0.207 0.0 HOH
3.521
N
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 CYS A:70 A:70 24.0 0.178 -148.6 101.0 24.0 0.178 0.0 HOH
3.466
N
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 CYS A:70 A:70 28.0 0.207 -151.8 101.7 28.0 0.207 0.0 HOH
3.507
N
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 CYS A:70 A:70 23.0 0.17 -152.0 85.4 23.0 0.17 0.0 HOH
3.313
N
O
CYS B:70 B:70 23.0 0.17 -152.0 85.4 23.0 0.17 0.0 HOH
3.313
N
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 CYS A:70 X:70 24.0 0.178 -149.7 96.8 24.0 0.178 0.0 HOH
3.279
N
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 CYS A:70 X:70 23.0 0.17 -150.2 99.4 23.0 0.17 0.0 HOH
3.406
N
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 CYS A:70 A:70 24.0 0.178 -154.0 96.4 24.0 0.178 0.0 HOH
3.361
N
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 CYS A:70 A:70 22.0 0.163 -151.9 100.6 22.0 0.163 0.0 HOH
3.322
N
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 CYS A:70 A:70 27.0 0.2 -147.5 108.4 27.0 0.2 0.0 HOH
3.454
N
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 CYS A:70 X:70 23.0 0.17 -152.0 104.2 23.0 0.17 0.0 HOH
3.594
N
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 CYS A:70 A:70 22.0 0.163 -151.8 97.6 22.0 0.163 0.0 HOH
3.324
SG
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 CYS A:70 A:70 24.0 0.178 -147.3 103.6 24.0 0.178 0.0 HOH
3.424
N
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 CYS A:70 A:70 22.0 0.163 -142.9 106.7 22.0 0.163 0.0 HOH
3.529
N
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 CYS A:70 A:70 14.0 0.104 -149.3 104.4 14.0 0.104 0.0 HOH
3.382
SG
O
CYS B:70 B:70 10.0 0.074 -145.7 102.5 NA NA NA
CYS C:70 C:70 12.0 0.089 -143.9 105.6 NA NA NA
CYS D:70 D:70 27.0 0.2 -149.1 102.3 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 CYS A:70 A:70 28.0 0.207 -143.8 112.8 28.0 0.207 0.0 HOH
3.460
C
O
CYS C:70 C:70 12.0 0.089 E -152.3 107.0 NA NA NA
CYS E:70 E:70 16.0 0.119 -149.7 105.2 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 CYS A:70 A:70 23.0 0.17 -145.0 105.4 23.0 0.17 0.0 HOH
3.558
N
O
CYS B:70 B:70 11.0 0.081 -149.6 105.9 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 CYS A:70 A:70 27.0 0.2 -151.0 102.9 27.0 0.2 0.0 HOH
3.510
N
O
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 CYS A:70 A:70 8.0 0.059 -153.9 98.8 8.0 0.059 0.0 HOH
3.423
N
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 CYS A:70 A:70 25.0 0.185 -154.0 101.6 25.0 0.185 0.0 HOH
3.236
HB2
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 CYS A:70 A:70 26.0 0.193 -150.5 99.8 26.0 0.193 0.0 HOH
3.292
HB2
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 CYS A:70 A:70 22.0 0.163 -161.8 93.7 22.0 0.163 0.0 HOH
3.210
N
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 CYS A:70 A:70 13.0 0.096 -151.5 102.5 13.0 0.096 0.0 HOH
5.406
N
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 CYS A:70 A:70 11.0 0.081 -153.9 99.6 11.0 0.081 0.0 HOH
3.226
SG
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 CYS A:70 A:70 26.0 0.193 -150.1 101.5 26.0 0.193 0.0 HOH
3.324
N
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 CYS A:70 A:70 22.0 0.163 -151.3 105.0 22.0 0.163 0.0 HOH
3.434
N
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 CYS A:70 A:70 25.0 0.185 -149.8 101.1 25.0 0.185 0.0 EDO
HOH
6.954
3.363
O
C
O1
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 CYS A:70 P:70 30.0 0.222 -141.4 98.3 30.0 0.222 0.0 HOH
4.667
SG
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 CYS A:70 A:70 28.0 0.207 E -150.0 98.1 28.0 0.207 0.0 HOH
3.470
N
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 CYS A:70 A:70 26.0 0.193 -156.0 100.6 26.0 0.193 0.0 HOH
3.450
N
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 CYS A:70 A:70 24.0 0.178 -142.9 90.3 24.0 0.178 0.0 HOH
3.490
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 CYS A:85 A:85 23.0 0.17 -151.9 99.8
af-p04746-f1 1 P04746 98.83 0.0 CYS A:85 A:85 26.0 0.193 -154.2 102.0
af-p0dte7-f1 1 P0DTE7 97.46 0.0 CYS A:85 A:85 24.0 0.178 -152.2 100.6
af-p0dte8-f1 1 P0DTE8 97.46 0.0 CYS A:85 A:85 23.0 0.17 -153.1 100.6
af-p0dub6-f1 1 P0DUB6 97.46 0.0 CYS A:85 A:85 24.0 0.178 -150.6 103.7