Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104116544 . C A CCDS782.1:NM_020978.4:c.728cCt>cAt_NP_066188.1:p.243P>H Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 PRO A:228 A:228 3.0 0.021 -63.0 141.4 3.0 0.021 0.0 PCA
HOH
3.256
3.630
O
O
CA
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 PRO A:228 A:228 3.0 0.021 -62.0 139.7 3.0 0.021 0.0 PCA
HOH
3.308
2.896
O
O
CA
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 PRO A:228 A:228 6.0 0.041 -66.1 144.1 6.0 0.041 0.0 PCA
HOH
3.138
3.468
O
CD
CA
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 PRO A:228 A:228 9.0 0.062 -61.6 143.1 9.0 0.062 0.0 PCA
HOH
3.306
3.063
O
O
CA
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 PRO A:228 A:228 12.0 0.083 -59.0 135.8 12.0 0.083 0.0 HOH
2.590
HD2
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 PRO A:228 A:228 4.0 0.028 -62.6 141.0 4.0 0.028 0.0 PCA
HOH
3.312
3.493
O
CG
CA
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 PRO A:228 A:228 10.0 0.069 -61.0 140.8 10.0 0.069 0.0 HOH
2.986
O
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 PRO A:228 A:228 5.0 0.034 -62.1 139.2 5.0 0.034 0.0 HOH
2.989
O
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 PRO A:228 A:228 5.0 0.034 -63.7 143.2 5.0 0.034 0.0 HOH
3.410
O
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 PRO A:228 A:228 11.0 0.076 -61.3 143.0 11.0 0.076 0.0 HOH
2.768
O
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 PRO A:228 A:228 11.0 0.076 -63.5 142.1 11.0 0.076 0.0 HOH
3.614
O
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 PRO A:228 A:228 11.0 0.076 -60.0 142.7 11.0 0.076 0.0 HOH
3.491
O
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 PRO A:228 A:228 7.0 0.048 -63.9 142.0 7.0 0.048 0.0 HOH
3.693
O
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 PRO A:228 A:228 10.0 0.069 -58.7 140.1 10.0 0.069 0.0 HOH
3.647
CD
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 PRO A:228 A:228 5.0 0.034 -61.1 137.2 5.0 0.034 0.0 HOH
3.652
O
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 PRO A:228 A:228 10.0 0.069 -62.7 141.6 10.0 0.069 0.0 HOH
3.562
O
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 PRO A:228 A:228 9.0 0.062 -63.9 148.6 9.0 0.062 0.0 HOH
3.637
O
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 PRO A:228 A:228 10.0 0.069 -63.7 143.1 10.0 0.069 0.0 HOH
3.497
CD
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 PRO A:228 A:228 9.0 0.062 -58.1 143.3 9.0 0.062 0.0 HOH
3.525
O
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 PRO A:228 A:228 3.0 0.021 -62.6 147.0 3.0 0.021 0.0 HOH
3.873
CD
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 PRO A:228 A:228 3.0 0.021 -58.1 142.7 3.0 0.021 0.0 NA
HOH
7.720
3.761
CD
O
NA
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 PRO A:228 A:228 10.0 0.069 -62.1 139.0 10.0 0.069 0.0 HOH
3.563
O
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 PRO A:228 A:228 9.0 0.062 -61.9 139.4 9.0 0.062 0.0 HOH
3.137
CD
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 PRO A:228 A:228 8.0 0.055 -60.4 138.0 8.0 0.055 0.0 HOH
3.508
CD
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 PRO A:228 A:228 7.0 0.048 -60.8 134.6 7.0 0.048 0.0 HOH
3.555
O
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 PRO A:228 A:228 8.0 0.055 -59.8 140.5 8.0 0.055 0.0 HOH
2.917
O
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 PRO A:228 A:228 7.0 0.048 -58.8 135.6 7.0 0.048 0.0 HOH
3.140
O
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 PRO A:228 A:228 10.0 0.069 -57.3 138.6 10.0 0.069 0.0 HOH
2.767
HD2
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 PRO A:228 A:228 11.0 0.076 -59.0 136.7 11.0 0.076 0.0 HOH
2.686
HD2
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 PRO A:228 A:228 11.0 0.076 -58.3 139.1 11.0 0.076 0.0 HOH
2.796
HD2
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 PRO A:228 A:228 10.0 0.069 -56.4 131.8 10.0 0.069 0.0 HOH
3.228
CD
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 PRO A:228 A:228 10.0 0.069 -56.3 139.3 10.0 0.069 0.0 HOH
2.721
HG2
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 PRO A:228 A:228 12.0 0.083 -69.3 134.0 12.0 0.083 0.0 HOH
8.950
CA
O
PRO B:228 B:228 10.0 0.069 -66.9 133.0 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 PRO A:228 A:228 11.0 0.076 -57.3 137.6 11.0 0.076 0.0 HOH
2.768
HD2
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 PRO A:228 A:228 10.0 0.069 -57.0 139.0 10.0 0.069 0.0 HOH
2.728
HD2
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 PRO A:228 A:228 8.0 0.055 -61.6 139.9 8.0 0.055 0.0 HOH
3.037
O
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 PRO A:228 A:228 11.0 0.076 -58.6 138.4 11.0 0.076 0.0 HOH
3.390
CD
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 PRO A:228 A:228 9.0 0.062 -64.2 142.3 9.0 0.062 0.0 HOH
2.998
O
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 PRO A:228 A:228 9.0 0.062 -59.7 138.6 9.0 0.062 0.0 HOH
3.772
CD
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 PRO A:228 A:228 10.0 0.069 -63.4 144.9 10.0 0.069 0.0 HOH
3.140
O
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 PRO A:228 A:228 9.0 0.062 -60.1 138.4 9.0 0.062 0.0 NA
HOH
8.439
2.645
N
O
NA
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 PRO A:228 A:228 11.0 0.076 -64.6 148.0 11.0 0.076 0.0 HOH
3.502
O
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 PRO A:228 A:228 9.0 0.062 -62.1 140.5 9.0 0.062 0.0 HOH
3.481
CD
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 PRO A:228 A:228 9.0 0.062 -62.0 142.8 9.0 0.062 0.0 HOH
3.542
CD
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 PRO A:228 A:228 12.0 0.083 -61.1 139.5 12.0 0.083 0.0 HOH
3.089
CD
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 PRO A:228 A:228 10.0 0.069 -62.2 138.2 10.0 0.069 0.0 HOH
3.591
O
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 PRO A:228 A:228 7.0 0.048 -63.4 140.3 7.0 0.048 0.0 HOH
2.967
O
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 PRO A:228 A:228 7.0 0.048 -60.3 143.1 7.0 0.048 0.0 HOH
3.552
O
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 PRO A:228 A:228 10.0 0.069 -63.5 141.6 10.0 0.069 0.0 HOH
3.355
CD
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 PRO A:228 A:228 8.0 0.055 -60.4 139.0 8.0 0.055 0.0 HOH
3.027
O
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 PRO A:228 A:228 9.0 0.062 -64.0 141.0 9.0 0.062 0.0 HOH
3.698
O
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 PRO A:228 A:228 12.0 0.083 -62.1 139.5 12.0 0.083 0.0 HOH
3.236
CG
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 PRO A:228 A:228 12.0 0.083 -56.5 137.0 12.0 0.083 0.0 HOH
3.471
O
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 PRO A:228 A:228 13.0 0.09 -63.2 141.3 13.0 0.09 0.0 HOH
3.528
O
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 PRO A:228 A:228 11.0 0.076 -52.5 127.2 11.0 0.076 0.0 HOH
9.329
O
O
PRO B:228 B:228 11.0 0.076 -52.5 127.2 11.0 0.076 0.0 HOH
9.329
O
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 PRO A:228 X:228 8.0 0.055 -54.8 134.7 8.0 0.055 0.0 HOH
3.376
CD
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 PRO A:228 X:228 12.0 0.083 -55.8 133.4 12.0 0.083 0.0 HOH
3.308
CD
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 PRO A:228 A:228 11.0 0.076 -56.7 134.8 11.0 0.076 0.0 HOH
3.156
CD
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 PRO A:228 A:228 11.0 0.076 -52.4 132.1 11.0 0.076 0.0 HOH
3.347
CD
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 PRO A:228 A:228 11.0 0.076 -57.3 140.4 11.0 0.076 0.0 HOH
3.370
O
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 PRO A:228 X:228 11.0 0.076 -56.8 135.5 11.0 0.076 0.0 HOH
3.351
CD
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 PRO A:228 A:228 11.0 0.076 -56.7 134.8 11.0 0.076 0.0 HOH
2.632
O
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 PRO A:228 A:228 11.0 0.076 -57.7 136.9 11.0 0.076 0.0 HOH
3.061
O
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 PRO A:228 A:228 11.0 0.076 -59.0 139.4 11.0 0.076 0.0 HOH
3.051
O
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 PRO A:228 A:228 0.0 0.0 -63.2 143.2 0.0 0.0 0.0 HOH
3.301
O
O
PRO B:228 B:228 0.0 0.0 -63.1 144.5 NA NA NA
PRO C:228 C:228 0.0 0.0 -62.3 144.9 NA NA NA
PRO D:228 D:228 0.0 0.0 -62.8 142.2 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 PRO A:228 A:228 0.0 0.0 -69.0 156.1 0.0 0.0 0.0 HOH
2.869
O
O
PRO C:228 C:228 0.0 0.0 -63.6 142.0 NA NA NA
PRO E:228 E:228 0.0 0.0 -62.3 144.3 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 PRO A:228 A:228 3.0 0.021 -59.8 141.1 3.0 0.021 0.0 HOH
2.872
O
O
PRO B:228 B:228 1.0 0.007 -61.8 142.0 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 PRO A:228 A:228 5.0 0.034 -66.4 143.2 5.0 0.034 0.0 HOH
3.263
O
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 PRO A:228 A:228 0.0 0.0 -56.0 141.0 0.0 0.0 0.0 HOH
3.634
O
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 PRO A:228 A:228 5.0 0.034 -59.0 140.8 5.0 0.034 0.0 HOH
2.805
O
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 PRO A:228 A:228 5.0 0.034 -60.4 143.1 5.0 0.034 0.0 HOH
2.792
O
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 PRO A:228 A:228 9.0 0.062 -59.4 135.4 9.0 0.062 0.0 HOH
2.866
O
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 PRO A:228 A:228 4.0 0.028 -61.5 146.4 4.0 0.028 0.0 HOH
3.443
O
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 PRO A:228 A:228 4.0 0.028 -63.9 143.5 4.0 0.028 0.0 HOH
2.772
O
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 PRO A:228 A:228 3.0 0.021 -68.8 145.6 3.0 0.021 0.0 HOH
3.455
O
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 PRO A:228 A:228 4.0 0.028 -57.3 140.6 4.0 0.028 0.0 CL
EDO
HOH
9.667
2.808
3.370
CD
O
O
CL
O1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 PRO A:228 A:228 3.0 0.021 -60.0 138.9 3.0 0.021 0.0 EDO
HOH
2.518
3.406
O
O
O2
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 PRO A:228 P:228 8.0 0.055 -56.9 152.2 8.0 0.055 0.0 HOH
4.268
CD
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 PRO A:228 A:228 3.0 0.021 -62.9 149.3 3.0 0.021 0.0 HOH
3.091
O
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 PRO A:228 A:228 3.0 0.021 -65.5 146.8 3.0 0.021 0.0 HOH
2.867
O
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 PRO A:228 A:228 1.0 0.007 -58.3 138.7 1.0 0.007 0.0 HOH
5.794
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 PRO A:243 A:243 10.0 0.069 -58.5 139.8
af-p04746-f1 1 P04746 98.83 0.0 PRO A:243 A:243 8.0 0.055 -59.3 140.4
af-p0dte7-f1 1 P0DTE7 97.46 0.0 PRO A:243 A:243 9.0 0.062 -58.9 139.8
af-p0dte8-f1 1 P0DTE8 97.46 0.0 PRO A:243 A:243 0.0 0.0 -59.6 141.2
af-p0dub6-f1 1 P0DUB6 97.46 0.0 PRO A:243 A:243 0.0 0.0 -58.8 140.9