Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104116553 . A C CCDS782.1:NM_020978.4:c.737tAc>tCc_NP_066188.1:p.246Y>S Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 TYR A:231 A:231 0.0 0.0 E -128.8 115.6 0.0 0.0 0.0 CL
PCA
HOH
5.717
5.259
6.192
CE2
N
CE2
CL
O
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 TYR A:231 A:231 0.0 0.0 E -127.3 119.6 0.0 0.0 0.0 CL
PCA
HOH
5.765
5.347
6.200
CE2
N
CE2
CL
O
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 TYR A:231 A:231 0.0 0.0 E -127.2 119.7 0.0 0.0 0.0 CL
PCA
HOH
5.660
5.273
6.032
CE2
N
CE2
CL
O
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 TYR A:231 A:231 0.0 0.0 E -127.4 121.8 0.0 0.0 0.0 CL
PCA
HOH
5.687
5.409
6.131
CE2
N
CE2
CL
O
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 TYR A:231 A:231 0.0 0.0 E -128.2 122.2 0.0 0.0 0.0 CL
HOH
5.040
5.344
HE2
HE2
CL
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 TYR A:231 A:231 0.0 0.0 E -129.9 125.3 0.0 0.0 0.0 CL
PCA
HOH
5.816
5.325
6.560
CE2
N
OH
CL
O
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 TYR A:231 A:231 0.0 0.0 E -127.3 125.3 0.0 0.0 0.0 CL
HOH
5.743
6.399
CE2
CE2
CL
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 TYR A:231 A:231 0.0 0.0 E -124.1 121.4 0.0 0.0 0.0 CL
HOH
6.498
6.738
CE2
OH
CL
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 TYR A:231 A:231 0.0 0.0 E -134.4 125.7 0.0 0.0 0.0 CL
HOH
5.917
6.345
CE2
CE2
CL
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 TYR A:231 A:231 0.0 0.0 E -129.1 123.8 0.0 0.0 0.0 CL
HOH
5.752
6.342
CE2
CE2
CL
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 TYR A:231 A:231 0.0 0.0 E -126.2 113.5 0.0 0.0 0.0 CL
HOH
5.690
6.383
CE2
CE2
CL
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 TYR A:231 A:231 0.0 0.0 E -125.9 111.7 0.0 0.0 0.0 CL
HOH
5.773
6.310
CE2
CE2
CL
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 TYR A:231 A:231 0.0 0.0 E -130.1 122.5 0.0 0.0 0.0 CL
HOH
5.800
6.297
CE2
CE2
CL
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 TYR A:231 A:231 0.0 0.0 E -126.9 124.7 0.0 0.0 0.0 CL
HOH
5.735
6.370
CE2
CE2
CL
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 TYR A:231 A:231 0.0 0.0 E -126.1 123.1 0.0 0.0 0.0 CL
HOH
5.731
6.319
CE2
CE2
CL
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 TYR A:231 A:231 0.0 0.0 E -123.6 126.1 0.0 0.0 0.0 CL
HOH
5.772
6.169
CE2
CE2
CL
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -123.9 115.0 0.0 0.0 0.0 NO2
HOH
5.412
6.334
CE2
CE2
N
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -124.7 117.7 0.0 0.0 0.0 NO2
HOH
4.639
6.236
CE2
CE2
O2
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -125.8 126.1 0.0 0.0 0.0 NO3
HOH
4.645
6.369
CE2
CE2
O2
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -126.5 125.1 0.0 0.0 0.0 NO3
HOH
4.525
6.260
CE2
CE2
O2
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -128.0 113.5 0.0 0.0 0.0 CL
AZI
HOH
5.726
9.752
6.380
CE2
O
CE2
CL
N1
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 TYR A:231 A:231 0.0 0.0 E -129.1 112.9 0.0 0.0 0.0 CL
HOH
5.734
6.322
CE2
CE2
CL
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 TYR A:231 A:231 0.0 0.0 E -126.1 119.0 0.0 0.0 0.0 CL
HOH
5.704
6.245
CE2
CE2
CL
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 TYR A:231 A:231 0.0 0.0 E -126.4 112.8 0.0 0.0 0.0 B9D
CL
HOH
9.731
5.666
6.198
CE2
CE2
CE2
O4
CL
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 TYR A:231 A:231 0.0 0.0 E -126.6 124.7 0.0 0.0 0.0 CL
HOH
5.412
6.750
CE2
OH
CL
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 TYR A:231 A:231 0.0 0.0 E -125.2 117.0 0.0 0.0 0.0 CL
HOH
5.795
6.220
CE2
CE2
CL
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 TYR A:231 A:231 0.0 0.0 E -123.3 122.2 0.0 0.0 0.0 CL
3L9
HOH
5.744
9.925
6.232
CE2
O
CE2
CL
O4F
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 TYR A:231 A:231 0.0 0.0 E -126.7 122.3 0.0 0.0 0.0 CL
HOH
4.933
5.314
HE2
HE2
CL
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 TYR A:231 A:231 0.0 0.0 E -124.6 121.2 0.0 0.0 0.0 5J7
CL
HOH
8.930
4.964
5.335
HE2
HE2
HE2
H66
CL
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 TYR A:231 A:231 0.0 0.0 E -125.6 122.3 0.0 0.0 0.0 5QP
CL
HOH
9.247
4.891
5.364
HE2
HE2
HE2
OAD
CL
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 TYR A:231 A:231 0.0 0.0 E -124.9 128.1 0.0 0.0 0.0 CL
HOH
5.800
6.231
CE2
CE2
CL
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 TYR A:231 A:231 0.0 0.0 E -126.4 121.3 0.0 0.0 0.0 CL
HOH
4.919
5.306
HE2
HE2
CL
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 TYR A:231 A:231 0.0 0.0 E -123.8 123.6 0.0 0.0 0.0 CL
HOH
5.773
6.181
CE2
CE2
CL
O
TYR B:231 B:231 0.0 0.0 E -123.0 122.6 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 TYR A:231 A:231 0.0 0.0 E -124.8 121.0 0.0 0.0 0.0 CL
ZXU
HOH
4.993
9.357
5.343
HE2
HE2
HE2
CL
HO60
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 TYR A:231 A:231 0.0 0.0 E -126.6 120.7 0.0 0.0 0.0 ZXY
CL
HOH
8.857
4.958
5.334
HE2
HE2
HE2
HO37
CL
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 TYR A:231 A:231 0.0 0.0 E -128.1 123.5 0.0 0.0 0.0 HOH
6.418
CE2
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 TYR A:231 A:231 0.0 0.0 E -125.9 125.3 0.0 0.0 0.0 HOH
6.332
CE2
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 TYR A:231 A:231 0.0 0.0 E -126.9 119.5 0.0 0.0 0.0 CL
HOH
5.829
4.930
CE2
OH
CL
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 TYR A:231 A:231 0.0 0.0 E -126.1 123.9 0.0 0.0 0.0 CL
HOH
5.771
6.369
CE2
CE2
CL
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -127.4 123.3 0.0 0.0 0.0 NO3
HOH
4.560
6.428
CE2
CE2
O2
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -126.2 117.7 0.0 0.0 0.0 CL
AZI
HOH
5.888
9.797
6.354
CE2
O
CE2
CL
N1
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 TYR A:231 A:231 0.0 0.0 E -125.8 125.9 0.0 0.0 0.0 NO3
HOH
5.540
6.366
CE2
CE2
O2
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 TYR A:231 A:231 0.0 0.0 E -128.7 124.3 0.0 0.0 0.0 HOH
5.474
CE2
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 TYR A:231 A:231 0.0 0.0 E -127.9 123.6 0.0 0.0 0.0 CL
HOH
5.678
6.268
CE2
CE2
CL
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 TYR A:231 A:231 0.0 0.0 E -131.5 125.8 0.0 0.0 0.0 CL
HOH
5.732
3.648
CE2
CE1
CL
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 TYR A:231 A:231 0.0 0.0 E -123.2 126.7 0.0 0.0 0.0 CL
HOH
5.642
5.934
CE2
CE2
CL
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 TYR A:231 A:231 0.0 0.0 E -127.9 119.2 0.0 0.0 0.0 HOH
6.176
CE2
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 TYR A:231 A:231 0.0 0.0 E -129.0 122.4 0.0 0.0 0.0 CL
HOH
5.792
6.349
CE2
CE2
CL
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 TYR A:231 A:231 2.0 0.009 E -128.3 122.1 2.0 0.009 0.0 HOH
5.729
CE2
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 TYR A:231 A:231 2.0 0.009 E -127.0 119.4 2.0 0.009 0.0 HOH
3.015
O
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 TYR A:231 A:231 0.0 0.0 E -127.0 122.2 0.0 0.0 0.0 CL
HOH
5.671
6.310
CE2
CE2
CL
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 TYR A:231 A:231 0.0 0.0 E -130.8 112.8 0.0 0.0 0.0 CL
HOH
5.862
6.334
CE2
CE2
CL
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 TYR A:231 A:231 0.0 0.0 E -122.0 125.6 0.0 0.0 0.0 CL
HOH
5.851
6.329
CE2
CE2
CL
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 TYR A:231 A:231 0.0 0.0 E -131.3 127.8 0.0 0.0 0.0 CL
HOH
5.801
6.315
CE2
CE2
CL
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 TYR A:231 A:231 0.0 0.0 E -122.5 124.2 0.0 0.0 0.0 CL
5.656
CE2
CL
TYR B:231 B:231 0.0 0.0 E -122.4 124.1 0.0 0.0 0.0 CL
5.656
CE2
CL
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 TYR A:231 X:231 0.0 0.0 E -124.3 126.5 0.0 0.0 0.0 CL
HOH
5.823
6.122
CE2
CE2
CL
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 TYR A:231 X:231 0.0 0.0 E -125.5 126.5 0.0 0.0 0.0 CL
HOH
5.835
6.309
CE2
CE2
CL
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 TYR A:231 A:231 0.0 0.0 E -130.0 124.9 0.0 0.0 0.0 CL
HOH
5.767
6.308
CE2
CE2
CL
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 TYR A:231 A:231 0.0 0.0 E -128.5 125.8 0.0 0.0 0.0 CL
HOH
5.825
6.271
CE2
CE2
CL
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 TYR A:231 A:231 0.0 0.0 E -128.6 130.2 0.0 0.0 0.0 CL
HOH
5.919
6.161
CE2
CE2
CL
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 TYR A:231 X:231 0.0 0.0 E -123.6 128.9 0.0 0.0 0.0 CL
HOH
5.869
6.309
CE2
CE2
CL
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 TYR A:231 A:231 0.0 0.0 E -131.7 122.9 0.0 0.0 0.0 CL
HOH
5.782
6.358
CE2
CE2
CL
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 TYR A:231 A:231 0.0 0.0 E -129.2 125.8 0.0 0.0 0.0 CL
HOH
5.835
6.425
CE2
CE2
CL
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 TYR A:231 A:231 0.0 0.0 E -128.3 128.0 0.0 0.0 0.0 CL
HOH
5.872
6.285
CE2
CE2
CL
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 PHE A:231 A:231 0.0 0.0 E -129.4 119.4 0.0 0.0 0.0 CL
HOH
5.913
6.365
CE1
CE1
CL
O
PHE B:231 B:231 0.0 0.0 E -126.5 120.6 NA NA NA
PHE C:231 C:231 0.0 0.0 E -131.1 122.7 NA NA NA
PHE D:231 D:231 0.0 0.0 E -129.3 117.7 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 PHE A:231 A:231 1.0 0.005 E -132.3 107.8 1.0 0.005 0.0 CL
HOH
5.928
6.298
CE1
CE1
CL
O
PHE C:231 C:231 0.0 0.0 E -127.2 114.9 NA NA NA
PHE E:231 E:231 0.0 0.0 E -137.2 112.2 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 PHE A:231 A:231 0.0 0.0 E -124.1 122.3 0.0 0.0 0.0 HOH
5.735
CE1
O
PHE B:231 B:231 0.0 0.0 E -125.6 116.9 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 PHE A:231 A:231 0.0 0.0 E -128.1 121.7 0.0 0.0 0.0 CL
HOH
5.932
6.334
CE2
CE2
CL
H1
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 PHE A:231 A:231 0.0 0.0 E -126.2 134.2 0.0 0.0 0.0 CL
HOH
5.905
6.330
CE2
CE2
CL
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 PHE A:231 A:231 0.0 0.0 E -125.7 134.1 0.0 0.0 0.0 CL
HOH
4.851
5.428
HE2
HE2
CL
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 PHE A:231 A:231 0.0 0.0 E -126.0 130.2 0.0 0.0 0.0 CL
HOH
4.957
5.406
HE2
HE2
CL
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 PHE A:231 A:231 0.0 0.0 E -123.0 126.9 0.0 0.0 0.0 GLC
CL
HOH
9.968
5.875
6.375
O
CE1
CE1
O2
CL
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 PHE A:231 A:231 0.0 0.0 E -128.9 122.1 0.0 0.0 0.0 CL
HOH
5.662
6.233
CE1
CE1
CL
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 PHE A:231 A:231 0.0 0.0 E -133.0 117.7 0.0 0.0 0.0 CL
HOH
5.669
6.288
CE2
CE2
CL
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 PHE A:231 A:231 0.0 0.0 E -131.7 123.0 0.0 0.0 0.0 CL
HOH
5.677
6.333
CE2
CE2
CL
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 PHE A:231 A:231 0.0 0.0 E -130.3 121.6 0.0 0.0 0.0 CL
EDO
HOH
5.905
8.219
6.357
CE1
N
CE1
CL
C1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 PHE A:231 A:231 0.0 0.0 E -126.9 111.7 0.0 0.0 0.0 BGC
CL
EDO
HOH
9.524
6.191
8.196
6.466
O
CE1
N
CE1
O1
CL
O2
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 PHE A:231 P:231 0.0 0.0 E -142.2 124.5 0.0 0.0 0.0 CL
HOH
5.522
6.138
CE2
CE2
CL
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 PHE A:231 A:231 0.0 0.0 E -131.4 122.0 0.0 0.0 0.0 CL
HOH
5.714
6.486
CE2
CE2
CL
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 PHE A:231 A:231 0.0 0.0 E -131.0 119.7 0.0 0.0 0.0 CL
HOH
5.969
2.924
CE2
CD2
CL
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 PHE A:231 A:231 1.0 0.005 E -129.9 122.5 1.0 0.005 0.0 CL
HOH
5.950
6.355
CE2
CE2
CL
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 TYR A:246 A:246 0.0 0.0 E -132.2 120.6
af-p04746-f1 1 P04746 98.83 0.0 TYR A:246 A:246 0.0 0.0 E -133.0 124.2
af-p0dte7-f1 1 P0DTE7 97.46 0.0 TYR A:246 A:246 0.0 0.0 E -132.9 121.4
af-p0dte8-f1 1 P0DTE8 97.46 0.0 TYR A:246 A:246 0.0 0.0 E -132.4 120.2
af-p0dub6-f1 1 P0DUB6 97.46 0.0 TYR A:246 A:246 0.0 0.0 E -132.5 119.5