Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104116981 . C A CCDS782.1:NM_020978.4:c.844Cgc>Agc_NP_066188.1:p.282R>S Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 ARG A:267 A:267 55.0 0.244 T -81.9 -6.2 55.0 0.244 0.0 HOH
2.715
NH1
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 ARG A:267 A:267 58.0 0.258 T -83.0 -5.8 58.0 0.258 0.0 HOH
2.808
NH1
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 ARG A:267 A:267 46.0 0.204 T -81.6 -7.9 46.0 0.204 0.0 HOH
2.889
O
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 ARG A:267 A:267 44.0 0.196 T -81.1 -8.5 44.0 0.196 0.0 HOH
2.754
O
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 ARG A:267 A:267 52.0 0.231 T -75.7 -9.3 52.0 0.231 0.0 HOH
2.003
HH12
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 ARG A:267 A:267 50.0 0.222 T -77.6 -11.4 50.0 0.222 0.0 HOH
3.355
NH1
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 ARG A:267 A:267 57.0 0.253 T -83.4 -8.0 57.0 0.253 0.0 HOH
2.807
NH1
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 ARG A:267 A:267 55.0 0.244 T -83.0 -10.6 55.0 0.244 0.0 HOH
2.946
NH1
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 ARG A:267 A:267 52.0 0.231 H -76.1 -14.5 52.0 0.231 0.0 HOH
3.105
NH1
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 ARG A:267 A:267 56.0 0.249 T -80.5 -11.9 56.0 0.249 0.0 HOH
3.081
O
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 ARG A:267 A:267 58.0 0.258 T -83.1 -8.7 58.0 0.258 0.0 HOH
2.736
O
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 ARG A:267 A:267 57.0 0.253 T -82.2 -8.4 57.0 0.253 0.0 HOH
2.773
NH1
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 ARG A:267 A:267 56.0 0.249 H -83.4 -10.9 56.0 0.249 0.0 HOH
3.260
NH2
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 ARG A:267 A:267 56.0 0.249 T -81.4 -9.7 56.0 0.249 0.0 HOH
3.154
O
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 ARG A:267 A:267 54.0 0.24 T -82.1 -9.4 54.0 0.24 0.0 HOH
2.682
O
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 ARG A:267 A:267 55.0 0.244 T -83.6 -9.2 55.0 0.244 0.0 HOH
3.190
NH1
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 ARG A:267 A:267 69.0 0.307 T -74.3 -5.4 69.0 0.307 0.0 HOH
2.999
O
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 ARG A:267 A:267 59.0 0.262 T -82.3 -7.8 59.0 0.262 0.0 HOH
2.838
O
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 ARG A:267 A:267 56.0 0.249 T -78.7 -9.5 56.0 0.249 0.0 HOH
2.929
O
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 ARG A:267 A:267 52.0 0.231 T -82.8 -5.8 52.0 0.231 0.0 HOH
3.080
O
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 ARG A:267 A:267 60.0 0.267 H -83.4 -9.5 60.0 0.267 0.0 HOH
2.688
O
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 ARG A:267 A:267 58.0 0.258 T -79.2 -14.1 58.0 0.258 0.0 HOH
2.667
O
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 ARG A:267 A:267 58.0 0.258 T -82.4 -9.7 58.0 0.258 0.0 HOH
2.848
O
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 ARG A:267 A:267 58.0 0.258 T -82.5 -10.4 58.0 0.258 0.0 HOH
2.795
O
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 ARG A:267 A:267 76.0 0.338 T -95.9 3.4 76.0 0.338 0.0 HOH
4.692
N
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 ARG A:267 A:267 59.0 0.262 T -80.5 -9.0 59.0 0.262 0.0 HOH
2.874
O
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 ARG A:267 A:267 44.0 0.196 H -76.3 -14.8 44.0 0.196 0.0 HOH
2.646
NH1
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 ARG A:267 A:267 60.0 0.267 H -79.1 -10.0 60.0 0.267 0.0 HOH
2.064
HH12
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 ARG A:267 A:267 51.0 0.227 H -75.0 -11.3 51.0 0.227 0.0 HOH
2.206
HH12
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 ARG A:267 A:267 64.0 0.284 T -79.1 -8.3 64.0 0.284 0.0 HOH
2.041
HH12
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 ARG A:267 A:267 45.0 0.2 H -72.4 -11.6 45.0 0.2 0.0 HOH
2.712
O
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 ARG A:267 A:267 57.0 0.253 H -79.0 -9.2 57.0 0.253 0.0 HOH
2.006
HH12
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 ARG A:267 A:267 53.0 0.236 T -72.3 -7.9 53.0 0.236 0.0 HOH
2.731
NH1
O
ARG B:267 B:267 54.0 0.24 T -71.7 -8.6 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 ARG A:267 A:267 62.0 0.276 H -79.2 -8.9 62.0 0.276 0.0 HOH
2.061
HH11
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 ARG A:267 A:267 56.0 0.249 H -77.9 -9.1 56.0 0.249 0.0 HOH
2.021
HH12
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 ARG A:267 A:267 53.0 0.236 T -79.1 -11.1 53.0 0.236 0.0 HOH
3.024
NH1
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 ARG A:267 A:267 51.0 0.227 T -81.3 -6.4 51.0 0.227 0.0 HOH
2.660
NH1
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 ARG A:267 A:267 55.0 0.244 T -81.6 -8.1 55.0 0.244 0.0 HOH
3.117
NH1
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 ARG A:267 A:267 55.0 0.244 T -83.8 -7.7 55.0 0.244 0.0 HOH
3.293
O
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 ARG A:267 A:267 57.0 0.253 T -83.0 -8.2 57.0 0.253 0.0 HOH
3.244
O
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 ARG A:267 A:267 63.0 0.28 T -84.9 -6.7 63.0 0.28 0.0 HOH
2.871
O
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 ARG A:267 A:267 59.0 0.262 T -81.5 -10.8 59.0 0.262 0.0 HOH
2.642
O
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 ARG A:267 A:267 52.0 0.231 T -75.3 -11.2 52.0 0.231 0.0 HOH
3.889
NH2
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 ARG A:267 A:267 55.0 0.244 T -81.7 -11.0 55.0 0.244 0.0 HOH
2.917
O
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 ARG A:267 A:267 51.0 0.227 T -78.6 -10.0 51.0 0.227 0.0 HOH
2.707
NH1
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 ARG A:267 A:267 51.0 0.227 T -77.4 -4.7 51.0 0.227 0.0 HOH
2.860
O
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 ARG A:267 A:267 55.0 0.244 T -81.8 -13.6 55.0 0.244 0.0 HOH
2.780
NH1
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 ARG A:267 A:267 52.0 0.231 T -76.4 -7.8 52.0 0.231 0.0 HOH
5.099
N
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 ARG A:267 A:267 62.0 0.276 T -78.0 -10.7 62.0 0.276 0.0 HOH
2.832
NH1
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 ARG A:267 A:267 57.0 0.253 T -82.3 -10.7 57.0 0.253 0.0 HOH
2.847
O
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 ARG A:267 A:267 53.0 0.236 T -81.2 -9.5 53.0 0.236 0.0 HOH
3.079
O
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 ARG A:267 A:267 47.0 0.209 T -81.4 -9.1 47.0 0.209 0.0 HOH
3.004
NH1
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 ARG A:267 A:267 48.0 0.213 H -77.2 -9.4 48.0 0.213 0.0 HOH
2.848
O
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 ARG A:267 A:267 56.0 0.249 T -83.4 -4.2 56.0 0.249 0.0 HOH
6.757
NH2
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 ARG A:267 A:267 52.0 0.231 T -70.9 -9.3 46.0 0.204 0.027 B:P04745:0.027
HOH
5.209
N
O
ARG B:267 B:267 50.0 0.222 T -70.9 -9.3 39.0 0.173 0.049 A:P04745:0.049
HOH
5.209
N
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 ARG A:267 X:267 47.0 0.209 T -74.5 -9.1 47.0 0.209 0.0 HOH
2.786
NH1
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 ARG A:267 X:267 49.0 0.218 H -76.6 -11.3 49.0 0.218 0.0 HOH
2.944
O
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 ARG A:267 A:267 45.0 0.2 T -79.9 -7.9 45.0 0.2 0.0 HOH
2.797
NH1
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 ARG A:267 A:267 42.0 0.187 T -73.8 -11.5 42.0 0.187 0.0 HOH
2.669
O
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 ARG A:267 A:267 50.0 0.222 H -75.6 -12.2 50.0 0.222 0.0 HOH
3.118
NH1
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 ARG A:267 X:267 47.0 0.209 H -75.5 -12.8 47.0 0.209 0.0 HOH
2.654
O
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 ARG A:267 A:267 45.0 0.2 H -74.8 -11.8 45.0 0.2 0.0 HOH
2.821
O
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 ARG A:267 A:267 52.0 0.231 T -76.1 -8.1 52.0 0.231 0.0 HOH
2.687
O
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 ARG A:267 A:267 48.0 0.213 H -73.7 -11.8 48.0 0.213 0.0 HOH
2.684
O
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 ARG A:267 A:267 50.0 0.222 T -80.6 -7.1 50.0 0.222 0.0 HOH
2.679
O
O
ARG B:267 B:267 46.0 0.204 T -79.2 -9.7 NA NA NA
ARG C:267 C:267 45.0 0.2 H -80.3 -11.4 NA NA NA
ARG D:267 D:267 47.0 0.209 T -81.7 -7.6 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 ARG A:267 A:267 44.0 0.196 H -78.1 -11.8 44.0 0.196 0.0 HOH
2.860
O
O
ARG C:267 C:267 43.0 0.191 T -80.4 -5.3 NA NA NA
ARG E:267 E:267 46.0 0.204 H -80.8 -15.8 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 ARG A:267 A:267 47.0 0.209 H -75.9 -11.3 47.0 0.209 0.0 HOH
2.744
O
O
ARG B:267 B:267 46.0 0.204 H -83.6 -8.6 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 ARG A:267 A:267 43.0 0.191 H -81.3 -12.8 43.0 0.191 0.0 HOH
2.302
HH11
O
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 ARG A:267 A:267 53.0 0.236 H -76.2 -9.1 53.0 0.236 0.0 HOH
2.867
O
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 ARG A:267 A:267 50.0 0.222 T -75.8 -10.7 50.0 0.222 0.0 HOH
2.080
HH21
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 ARG A:267 A:267 51.0 0.227 T -74.2 -10.4 51.0 0.227 0.0 HOH
1.982
HH22
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 ARG A:267 A:267 50.0 0.222 T -73.1 -11.7 50.0 0.222 0.0 HOH
2.593
O
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 ARG A:267 A:267 59.0 0.262 T -80.3 -8.5 59.0 0.262 0.0 HOH
3.352
NH1
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 ARG A:267 A:267 53.0 0.236 H -75.3 -11.9 53.0 0.236 0.0 HOH
2.790
O
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 ARG A:267 A:267 48.0 0.213 H -83.6 -13.4 48.0 0.213 0.0 HOH
2.791
O
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 ARG A:267 A:267 49.0 0.218 T -76.2 -12.2 49.0 0.218 0.0 EDO
HOH
3.853
2.765
NH1
O
O1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 ARG A:267 A:267 49.0 0.218 T -80.8 -11.8 49.0 0.218 0.0 HOH
2.632
O
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 ARG A:267 P:267 50.0 0.222 T -94.8 -8.4 50.0 0.222 0.0 HOH
3.092
NH2
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 ARG A:267 A:267 52.0 0.231 T -85.0 -7.7 52.0 0.231 0.0 HOH
2.928
O
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 ARG A:267 A:267 47.0 0.209 H -76.3 -18.2 47.0 0.209 0.0 HOH
3.760
NH2
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 ARG A:267 A:267 54.0 0.24 H -76.5 -12.5 54.0 0.24 0.0 HOH
2.336
NH2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 ARG A:282 A:282 50.0 0.222 T -74.5 -3.2
af-p04746-f1 1 P04746 98.83 0.0 ARG A:282 A:282 50.0 0.222 T -75.3 -3.4
af-p0dte7-f1 1 P0DTE7 97.46 0.0 ARG A:282 A:282 53.0 0.236 T -74.3 -3.4
af-p0dte8-f1 1 P0DTE8 97.46 0.0 ARG A:282 A:282 50.0 0.222 T -74.5 -3.4
af-p0dub6-f1 1 P0DUB6 97.46 0.0 ARG A:282 A:282 52.0 0.231 T -74.8 -3.9