Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104117004 . G A CCDS782.1:NM_020978.4:c.867atG>atA_NP_066188.1:p.289M>I Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 MET A:274 A:274 0.0 0.0 G -61.0 -24.2 0.0 0.0 0.0 HOH
3.203
CG
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 MET A:274 A:274 0.0 0.0 G -59.2 -26.7 0.0 0.0 0.0 HOH
3.285
CG
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 MET A:274 A:274 0.0 0.0 G -57.8 -29.1 0.0 0.0 0.0 HOH
3.061
CG
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 MET A:274 A:274 0.0 0.0 G -57.6 -31.3 0.0 0.0 0.0 HOH
3.191
CG
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 MET A:274 A:274 0.0 0.0 G -64.7 -26.1 0.0 0.0 0.0 GLC
GLC
HOH
8.795
7.994
2.312
O
HA
HG3
H3
H2
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 MET A:274 A:274 0.0 0.0 G -53.8 -25.8 0.0 0.0 0.0 HOH
8.542
N
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 MET A:274 A:274 0.0 0.0 G -62.8 -24.8 0.0 0.0 0.0 HOH
3.222
CG
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 MET A:274 A:274 0.0 0.0 G -63.3 -22.5 0.0 0.0 0.0 HOH
3.093
CG
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 MET A:274 A:274 0.0 0.0 G -53.9 -27.9 0.0 0.0 0.0 HOH
3.187
CG
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 MET A:274 A:274 0.0 0.0 G -58.5 -25.7 0.0 0.0 0.0 HOH
3.202
CG
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 MET A:274 A:274 0.0 0.0 G -63.8 -19.2 0.0 0.0 0.0 HOH
3.361
CG
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 MET A:274 A:274 0.0 0.0 G -58.6 -27.2 0.0 0.0 0.0 HOH
3.180
CG
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 MET A:274 A:274 0.0 0.0 G -56.5 -23.9 0.0 0.0 0.0 HOH
6.088
N
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 MET A:274 A:274 0.0 0.0 G -57.3 -25.8 0.0 0.0 0.0 HOH
3.227
CG
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 MET A:274 A:274 1.0 0.005 G -60.2 -22.7 1.0 0.005 0.0 HOH
3.251
CG
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 MET A:274 A:274 0.0 0.0 G -57.3 -28.4 0.0 0.0 0.0 HOH
7.058
C
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 MET A:274 A:274 0.0 0.0 G -53.1 -33.1 0.0 0.0 0.0 HOH
3.189
CG
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 MET A:274 A:274 0.0 0.0 G -55.7 -27.6 0.0 0.0 0.0 HOH
3.314
CG
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 MET A:274 A:274 1.0 0.005 G -61.3 -22.3 1.0 0.005 0.0 HOH
3.329
CG
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 MET A:274 A:274 1.0 0.005 G -54.4 -29.4 1.0 0.005 0.0 HOH
3.177
CG
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 MET A:274 A:274 0.0 0.0 G -62.3 -24.5 0.0 0.0 0.0 HOH
3.223
CG
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 MET A:274 A:274 0.0 0.0 G -59.9 -27.9 0.0 0.0 0.0 HOH
3.333
CG
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 MET A:274 A:274 0.0 0.0 G -62.0 -25.8 0.0 0.0 0.0 HOH
3.248
CG
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 MET A:274 A:274 0.0 0.0 G -61.7 -25.0 0.0 0.0 0.0 HOH
3.301
CG
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 MET A:274 A:274 0.0 0.0 G -63.7 -18.9 0.0 0.0 0.0 HOH
3.335
CG
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 MET A:274 A:274 0.0 0.0 G -63.3 -25.8 0.0 0.0 0.0 HOH
3.269
CG
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 MET A:274 A:274 0.0 0.0 G -63.3 -28.4 0.0 0.0 0.0 HOH
3.166
CG
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 MET A:274 A:274 0.0 0.0 G -64.5 -25.0 0.0 0.0 0.0 HOH
2.329
HG3
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 MET A:274 A:274 0.0 0.0 G -65.2 -24.5 0.0 0.0 0.0 HOH
2.336
HG3
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 MET A:274 A:274 0.0 0.0 G -66.3 -24.8 0.0 0.0 0.0 HOH
2.343
HG3
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 MET A:274 A:274 0.0 0.0 G -60.9 -31.9 0.0 0.0 0.0 HOH
3.224
CG
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 MET A:274 A:274 0.0 0.0 G -65.0 -25.2 0.0 0.0 0.0 HOH
2.292
HG3
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 MET A:274 A:274 0.0 0.0 G -64.5 -28.1 0.0 0.0 0.0 HOH
3.185
CG
O
MET B:274 B:274 0.0 0.0 G -63.3 -27.8 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 MET A:274 A:274 0.0 0.0 G -66.1 -25.9 0.0 0.0 0.0 HOH
2.293
HG3
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 MET A:274 A:274 0.0 0.0 G -66.9 -24.9 0.0 0.0 0.0 HOH
2.311
HG3
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 MET A:274 A:274 0.0 0.0 G -57.5 -24.2 0.0 0.0 0.0 HOH
3.506
CG
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 MET A:274 A:274 0.0 0.0 G -55.9 -25.3 0.0 0.0 0.0 HOH
3.319
CG
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 MET A:274 A:274 0.0 0.0 G -62.1 -25.3 0.0 0.0 0.0 HOH
3.339
CG
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 MET A:274 A:274 1.0 0.005 G -66.2 -18.2 1.0 0.005 0.0 HOH
3.187
CG
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 MET A:274 A:274 0.0 0.0 G -61.4 -23.1 0.0 0.0 0.0 HOH
3.251
CG
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 MET A:274 A:274 0.0 0.0 G -59.5 -23.7 0.0 0.0 0.0 HOH
3.188
CG
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 MET A:274 A:274 0.0 0.0 G -56.9 -29.0 0.0 0.0 0.0 HOH
3.392
CG
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 MET A:274 A:274 2.0 0.011 G -58.8 -24.9 2.0 0.011 0.0 HOH
3.177
CG
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 MET A:274 A:274 0.0 0.0 G -58.8 -26.6 0.0 0.0 0.0 HOH
3.111
CG
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 MET A:274 A:274 0.0 0.0 G -53.9 -30.3 0.0 0.0 0.0 HOH
3.024
CE
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 MET A:274 A:274 0.0 0.0 G -62.5 -25.8 0.0 0.0 0.0 HOH
7.419
O
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 MET A:274 A:274 0.0 0.0 G -60.7 -22.9 0.0 0.0 0.0 HOH
3.248
CG
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 MET A:274 A:274 0.0 0.0 G -54.7 -25.5 0.0 0.0 0.0 HOH
3.214
CG
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 MET A:274 A:274 0.0 0.0 G -63.4 -14.7 0.0 0.0 0.0 HOH
3.015
CG
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 MET A:274 A:274 0.0 0.0 G -63.3 -25.1 0.0 0.0 0.0 HOH
8.471
SD
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 MET A:274 A:274 1.0 0.005 G -56.7 -25.1 1.0 0.005 0.0 HOH
3.295
CG
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 MET A:274 A:274 0.0 0.0 G -55.6 -27.5 0.0 0.0 0.0 HOH
3.221
CG
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 MET A:274 A:274 0.0 0.0 G -54.7 -30.6 0.0 0.0 0.0 BGC
GLC
HOH
9.502
8.716
3.388
C
N
CG
C1
O2
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 MET A:274 A:274 1.0 0.005 G -57.5 -35.7 1.0 0.005 0.0 HOH
7.512
N
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 MET A:274 A:274 0.0 0.0 G -66.9 -30.1 0.0 0.0 0.0 HOH
3.097
CG
O
MET B:274 B:274 0.0 0.0 G -66.9 -30.1 0.0 0.0 0.0 HOH
3.097
CG
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 MET A:274 X:274 0.0 0.0 G -76.0 -22.9 0.0 0.0 0.0 HOH
3.240
CG
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 MET A:274 X:274 0.0 0.0 G -62.3 -28.1 0.0 0.0 0.0 HOH
3.332
CG
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 MET A:274 A:274 0.0 0.0 G -54.3 -32.5 0.0 0.0 0.0 HOH
3.532
CG
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 MET A:274 A:274 0.0 0.0 G -60.4 -25.4 0.0 0.0 0.0 GLC
GLC
HOH
8.275
9.480
3.325
C
N
CG
C1
O6
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 MET A:274 A:274 1.0 0.005 G -67.7 -23.8 1.0 0.005 0.0 HOH
3.241
CG
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 MET A:274 X:274 0.0 0.0 G -67.4 -23.6 0.0 0.0 0.0 HOH
3.192
CG
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 MET A:274 A:274 0.0 0.0 G -62.4 -26.5 0.0 0.0 0.0 HOH
3.324
CG
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 MET A:274 A:274 0.0 0.0 G -65.1 -22.6 0.0 0.0 0.0 GLC
GLC
HOH
9.691
8.762
3.216
C
N
CG
C1
O2
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 MET A:274 A:274 0.0 0.0 G -61.2 -25.9 0.0 0.0 0.0 HOH
3.284
CG
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 MET A:274 A:274 1.0 0.005 G -62.4 -28.2 1.0 0.005 0.0 HOH
3.417
N
O
MET B:274 B:274 2.0 0.011 G -63.8 -29.9 NA NA NA
MET C:274 C:274 1.0 0.005 G -62.8 -29.5 NA NA NA
MET D:274 D:274 0.0 0.0 G -62.8 -30.0 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 MET A:274 A:274 0.0 0.0 G -62.4 -28.3 0.0 0.0 0.0 HOH
2.935
SD
O
MET C:274 C:274 2.0 0.011 G -69.4 -31.6 NA NA NA
MET E:274 E:274 3.0 0.016 G -59.0 -25.6 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 MET A:274 A:274 2.0 0.011 G -60.5 -29.6 2.0 0.011 0.0 HOH
3.350
N
O
MET B:274 B:274 4.0 0.022 G -62.1 -31.4 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 MET A:274 A:274 0.0 0.0 G -62.4 -26.2 0.0 0.0 0.0 HOH
2.688
CG
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 MET A:274 A:274 2.0 0.011 G -65.9 -28.3 2.0 0.011 0.0 HOH
3.544
CB
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 MET A:274 A:274 0.0 0.0 G -60.3 -31.6 0.0 0.0 0.0 HOH
5.558
H
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 MET A:274 A:274 0.0 0.0 G -65.3 -29.6 0.0 0.0 0.0 HOH
5.434
H
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 MET A:274 A:274 0.0 0.0 G -61.3 -28.6 0.0 0.0 0.0 GLC
GLC
HOH
8.168
8.596
3.422
O
O
N
O6
O5
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 MET A:274 A:274 0.0 0.0 G -67.8 -25.9 0.0 0.0 0.0 HOH
7.113
C
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 MET A:274 A:274 0.0 0.0 G -69.0 -24.4 0.0 0.0 0.0 HOH
3.109
CG
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 MET A:274 A:274 0.0 0.0 G -61.5 -26.4 0.0 0.0 0.0 BGC
HOH
9.057
3.116
C
CG
O1
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 MET A:274 A:274 0.0 0.0 G -65.3 -27.2 0.0 0.0 0.0 GLC
EDO
HOH
8.718
8.118
3.368
O
O
CG
O5
O1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 MET A:274 A:274 0.0 0.0 G -63.7 -27.9 0.0 0.0 0.0 BGC
GLC
HOH
8.466
8.797
3.336
O
O
CG
O6
O5
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 MET A:274 P:274 0.0 0.0 G -58.2 -41.4 0.0 0.0 0.0 HOH
5.924
N
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 MET A:274 A:274 0.0 0.0 G -61.1 -29.8 0.0 0.0 0.0 HOH
3.185
CG
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 MET A:274 A:274 0.0 0.0 G -63.6 -25.2 0.0 0.0 0.0 GLC
HOH
9.094
3.223
O
CG
O5
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 MET A:274 A:274 0.0 0.0 G -64.8 -26.7 0.0 0.0 0.0 HOH
3.213
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 MET A:289 A:289 0.0 0.0 G -62.3 -27.3
af-p04746-f1 1 P04746 98.83 0.0 MET A:289 A:289 0.0 0.0 G -62.8 -28.3
af-p0dte7-f1 1 P0DTE7 97.46 0.0 MET A:289 A:289 0.0 0.0 G -62.2 -27.3
af-p0dte8-f1 1 P0DTE8 97.46 0.0 MET A:289 A:289 0.0 0.0 G -62.3 -27.4
af-p0dub6-f1 1 P0DUB6 97.46 0.0 MET A:289 A:289 0.0 0.0 G -63.0 -26.9