Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104117014 . A C CCDS782.1:NM_020978.4:c.877Aag>Cag_NP_066188.1:p.293K>Q Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 LYS A:278 A:278 116.0 0.58 G -53.0 -38.6 116.0 0.58 0.0 HOH
3.110
O
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 LYS A:278 A:278 114.0 0.57 G -54.8 -39.0 114.0 0.57 0.0 HOH
2.920
O
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 LYS A:278 A:278 106.0 0.53 G -67.3 -20.7 106.0 0.53 0.0 HOH
2.959
O
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 LYS A:278 A:278 110.0 0.55 G -54.3 -38.8 110.0 0.55 0.0 HOH
3.014
O
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 LYS A:278 A:278 96.0 0.48 G -55.2 -32.3 96.0 0.48 0.0 GLC
GLC
HOH
4.312
6.634
2.408
HZ1
HG3
HZ2
HO2
O6
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 LYS A:278 A:278 109.0 0.545 G -57.9 -31.6 109.0 0.545 0.0 HOH
3.182
O
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 LYS A:278 A:278 99.0 0.495 G -51.8 -45.0 99.0 0.495 0.0 HOH
3.116
CE
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 LYS A:278 A:278 94.0 0.47 G -59.4 -34.6 94.0 0.47 0.0 HOH
2.840
O
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 LYS A:278 A:278 107.0 0.535 G -55.8 -32.1 107.0 0.535 0.0 HOH
3.041
O
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 LYS A:278 A:278 95.0 0.475 G -54.8 -39.0 95.0 0.475 0.0 HOH
3.120
O
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 LYS A:278 A:278 105.0 0.525 G -58.8 -42.5 105.0 0.525 0.0 HOH
2.970
O
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 LYS A:278 A:278 96.0 0.48 G -50.6 -42.4 96.0 0.48 0.0 HOH
3.018
O
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 LYS A:278 A:278 104.0 0.52 G -56.2 -39.1 104.0 0.52 0.0 HOH
3.131
O
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 LYS A:278 A:278 98.0 0.49 G -51.8 -44.4 98.0 0.49 0.0 HOH
3.151
O
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 LYS A:278 A:278 94.0 0.47 G -53.0 -38.6 94.0 0.47 0.0 HOH
2.999
O
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 LYS A:278 A:278 101.0 0.505 G -57.8 -36.9 101.0 0.505 0.0 HOH
2.965
CE
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 LYS A:278 A:278 123.0 0.615 G -55.4 -44.3 123.0 0.615 0.0 HOH
2.688
NZ
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 LYS A:278 A:278 98.0 0.49 G -57.0 -38.1 98.0 0.49 0.0 HOH
2.690
NZ
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 LYS A:278 A:278 99.0 0.495 G -53.6 -41.4 99.0 0.495 0.0 HOH
3.250
O
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 LYS A:278 A:278 96.0 0.48 G -53.9 -45.2 96.0 0.48 0.0 HOH
2.926
O
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 LYS A:278 A:278 95.0 0.475 G -47.9 -43.2 95.0 0.475 0.0 HOH
3.163
O
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 LYS A:278 A:278 112.0 0.56 G -50.5 -41.3 112.0 0.56 0.0 HOH
2.660
NZ
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 LYS A:278 A:278 120.0 0.6 G -53.8 -41.7 120.0 0.6 0.0 HOH
3.025
O
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 LYS A:278 A:278 113.0 0.565 G -52.2 -43.3 113.0 0.565 0.0 HOH
2.838
NZ
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 LYS A:278 A:278 92.0 0.46 G -56.1 -33.2 92.0 0.46 0.0 HOH
2.671
NZ
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 LYS A:278 A:278 129.0 0.645 G -54.4 -41.1 129.0 0.645 0.0 HOH
2.795
O
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 LYS A:278 A:278 125.0 0.625 G -56.2 -36.5 125.0 0.625 0.0 HOH
2.647
NZ
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 LYS A:278 A:278 124.0 0.62 G -54.9 -36.6 124.0 0.62 0.0 HOH
1.962
HZ3
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 LYS A:278 A:278 120.0 0.6 G -54.5 -39.4 120.0 0.6 0.0 HOH
2.403
HZ1
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 LYS A:278 A:278 125.0 0.625 G -53.8 -39.2 125.0 0.625 0.0 HOH
2.052
HZ1
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 LYS A:278 A:278 121.0 0.605 G -54.0 -35.3 121.0 0.605 0.0 HOH
3.157
O
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 LYS A:278 A:278 128.0 0.64 G -54.4 -40.1 128.0 0.64 0.0 HOH
2.005
HZ1
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 LYS A:278 A:278 122.0 0.61 G -61.4 -39.3 122.0 0.61 0.0 HOH
2.707
O
O
LYS B:278 B:278 131.0 0.655 G -61.4 -40.3 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 LYS A:278 A:278 126.0 0.63 G -56.1 -38.7 126.0 0.63 0.0 HOH
2.590
HZ3
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 LYS A:278 A:278 125.0 0.625 G -54.9 -37.2 125.0 0.625 0.0 HOH
2.960
O
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 LYS A:278 A:278 97.0 0.485 G -54.1 -38.7 97.0 0.485 0.0 HOH
3.274
O
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 LYS A:278 A:278 98.0 0.49 G -53.0 -40.3 98.0 0.49 0.0 HOH
3.239
O
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 LYS A:278 A:278 99.0 0.495 G -54.4 -43.8 99.0 0.495 0.0 HOH
3.040
O
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 LYS A:278 A:278 118.0 0.59 G -56.1 -41.0 118.0 0.59 0.0 HOH
2.688
NZ
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 LYS A:278 A:278 100.0 0.5 G -51.2 -41.8 100.0 0.5 0.0 HOH
3.271
O
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 LYS A:278 A:278 93.0 0.465 G -52.5 -40.1 93.0 0.465 0.0 HOH
3.138
CD
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 LYS A:278 A:278 97.0 0.485 G -48.8 -44.3 97.0 0.485 0.0 HOH
3.323
O
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 LYS A:278 A:278 113.0 0.565 G -53.6 -35.0 113.0 0.565 0.0 HOH
6.492
O
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 LYS A:278 A:278 99.0 0.495 G -52.8 -46.1 99.0 0.495 0.0 HOH
2.870
O
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 LYS A:278 A:278 117.0 0.585 G -56.4 -41.0 117.0 0.585 0.0 HOH
3.129
NZ
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 LYS A:278 A:278 104.0 0.52 G -64.5 -31.7 104.0 0.52 0.0 HOH
2.966
NZ
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 LYS A:278 A:278 99.0 0.495 G -58.3 -43.8 99.0 0.495 0.0 HOH
3.017
O
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 LYS A:278 A:278 104.0 0.52 G -56.6 -34.7 104.0 0.52 0.0
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 LYS A:278 A:278 112.0 0.56 G -57.5 -36.9 112.0 0.56 0.0 HOH
4.073
NZ
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 LYS A:278 A:278 100.0 0.5 G -52.9 -44.9 100.0 0.5 0.0 HOH
3.205
O
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 LYS A:278 A:278 104.0 0.52 G -53.3 -34.8 104.0 0.52 0.0 HOH
7.067
CG
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 LYS A:278 A:278 100.0 0.5 G -63.0 -27.4 100.0 0.5 0.0 HOH
2.919
O
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 LYS A:278 A:278 110.0 0.55 G -54.2 -35.4 110.0 0.55 0.0 BGC
GLC
HOH
5.652
7.238
3.154
CD
CG
O
O2
O6
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 LYS A:278 A:278 105.0 0.525 G -58.2 -16.5 105.0 0.525 0.0
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 LYS A:278 A:278 105.0 0.525 T -44.5 -67.5 53.0 0.265 0.26 B:P04745:0.26
HOH
3.333
CD
O
LYS B:278 B:278 108.0 0.54 T -44.5 -67.4 67.0 0.335 0.205 A:P04745:0.205
HOH
3.212
NZ
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 LYS A:278 X:278 97.0 0.485 G -55.7 -33.3 97.0 0.485 0.0 HOH
2.681
NZ
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 LYS A:278 X:278 110.0 0.55 G -52.1 -40.0 110.0 0.55 0.0 HOH
2.722
NZ
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 LYS A:278 A:278 106.0 0.53 G -58.3 -27.1 106.0 0.53 0.0 HOH
3.277
CG
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 LYS A:278 A:278 104.0 0.52 G -55.5 -36.9 104.0 0.52 0.0 GLC
GLC
HOH
7.127
5.570
2.812
CG
CE
NZ
O6
O2
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 LYS A:278 A:278 116.0 0.58 G -52.3 -35.1 116.0 0.58 0.0 HOH
3.338
O
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 LYS A:278 X:278 100.0 0.5 G -51.4 -41.5 100.0 0.5 0.0 HOH
3.110
O
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 LYS A:278 A:278 103.0 0.515 G -58.2 -33.2 103.0 0.515 0.0 HOH
3.141
O
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 LYS A:278 A:278 101.0 0.505 G -59.6 -31.8 101.0 0.505 0.0 GLC
GLC
HOH
5.437
7.398
3.230
CE
CG
O
O2
O6
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 LYS A:278 A:278 106.0 0.53 G -61.0 -26.0 106.0 0.53 0.0 HOH
2.783
NZ
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 LYS A:278 A:278 124.0 0.62 G -51.3 -39.9 124.0 0.62 0.0 HOH
2.805
O
O
LYS B:278 B:278 123.0 0.615 G -54.2 -37.4 NA NA NA
LYS C:278 C:278 124.0 0.62 G -51.3 -41.3 NA NA NA
LYS D:278 D:278 125.0 0.625 G -52.6 -39.1 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 LYS A:278 A:278 130.0 0.65 G -63.6 -36.9 130.0 0.65 0.0 HOH
2.628
CD
O
LYS C:278 C:278 128.0 0.64 G -44.1 -47.6 NA NA NA
LYS E:278 E:278 130.0 0.65 G -51.7 -44.0 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 LYS A:278 A:278 123.0 0.615 G -54.0 -41.7 123.0 0.615 0.0 HOH
2.734
O
O
LYS B:278 B:278 127.0 0.635 G -50.7 -42.2 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 LYS A:278 A:278 126.0 0.63 G -51.2 -42.5 126.0 0.63 0.0 HOH
2.342
O
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 LYS A:278 A:278 122.0 0.61 G -56.7 -41.7 122.0 0.61 0.0 HOH
2.882
O
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 LYS A:278 A:278 130.0 0.65 G -46.2 -42.2 130.0 0.65 0.0 HOH
2.637
O
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 LYS A:278 A:278 125.0 0.625 G -53.1 -36.1 125.0 0.625 0.0 HOH
2.707
O
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 LYS A:278 A:278 123.0 0.615 G -55.1 -39.0 123.0 0.615 0.0 GLC
GLC
HOH
7.005
7.194
2.872
N
N
O
O6
O6
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 LYS A:278 A:278 130.0 0.65 G -63.3 -32.1 130.0 0.65 0.0 HOH
4.994
CE
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 LYS A:278 A:278 128.0 0.64 G -56.2 -41.5 128.0 0.64 0.0 HOH
2.696
O
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 LYS A:278 A:278 125.0 0.625 G -52.4 -43.6 125.0 0.625 0.0 BGC
HOH
7.479
2.933
N
O
O6
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 LYS A:278 A:278 124.0 0.62 G -54.7 -37.9 124.0 0.62 0.0 GLC
EDO
HOH
7.434
7.015
2.511
N
N
NZ
O5
O1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 LYS A:278 A:278 127.0 0.635 G -53.8 -41.5 127.0 0.635 0.0 BGC
GLC
HOH
7.230
7.281
2.775
N
N
O
O6
O6
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 LYS A:278 P:278 124.0 0.62 G -65.3 -16.7 124.0 0.62 0.0 HOH
3.143
NZ
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 LYS A:278 A:278 120.0 0.6 G -57.1 -39.4 120.0 0.6 0.0 HOH
2.811
O
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 LYS A:278 A:278 123.0 0.615 G -50.0 -38.7 123.0 0.615 0.0 GLC
HOH
7.566
2.701
N
O
O6
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 LYS A:278 A:278 125.0 0.625 G -55.9 -39.2 125.0 0.625 0.0 HOH
3.203
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 LYS A:293 A:293 123.0 0.615 G -54.4 -37.4
af-p04746-f1 1 P04746 98.83 0.0 LYS A:293 A:293 109.0 0.545 G -52.9 -37.5
af-p0dte7-f1 1 P0DTE7 97.46 0.0 LYS A:293 A:293 125.0 0.625 G -54.3 -37.1
af-p0dte8-f1 1 P0DTE8 97.46 0.0 LYS A:293 A:293 121.0 0.605 G -54.3 -37.2
af-p0dub6-f1 1 P0DUB6 97.46 0.0 LYS A:293 A:293 124.0 0.62 G -54.9 -36.2