Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104117852 . G A CCDS782.1:NM_020978.4:c.886Gga>Aga_NP_066188.1:p.296G>R Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLY A:281 A:281 3.0 0.04 T 124.0 -137.0 3.0 0.04 0.0 HOH
3.762
C
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLY A:281 A:281 4.0 0.053 T 124.3 -141.1 4.0 0.053 0.0 HOH
3.548
CA
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLY A:281 A:281 2.0 0.027 S 118.4 -133.7 2.0 0.027 0.0 HOH
4.040
C
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 GLY A:281 A:281 3.0 0.04 T 124.8 -140.6 3.0 0.04 0.0 HOH
3.611
C
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 GLY A:281 A:281 1.0 0.013 T 117.9 -136.4 1.0 0.013 0.0 GLC
HOH
6.513
3.144
H
HA3
H61
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 GLY A:281 A:281 0.0 0.0 S 124.7 -137.2 0.0 0.0 0.0 HOH
5.319
N
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 GLY A:281 A:281 0.0 0.0 S 124.2 -140.7 0.0 0.0 0.0 HOH
5.169
N
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 GLY A:281 A:281 1.0 0.013 S 124.6 -140.2 1.0 0.013 0.0 HOH
3.925
C
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 GLY A:281 A:281 0.0 0.0 S 127.4 -139.1 0.0 0.0 0.0 HOH
3.628
C
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 GLY A:281 A:281 0.0 0.0 S 120.9 -142.4 0.0 0.0 0.0 HOH
3.800
C
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 GLY A:281 A:281 0.0 0.0 T 128.3 -126.3 0.0 0.0 0.0 HOH
5.081
N
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 GLY A:281 A:281 0.0 0.0 S 114.2 -138.3 0.0 0.0 0.0 HOH
3.833
C
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLY A:281 A:281 0.0 0.0 S 116.8 -138.5 0.0 0.0 0.0 HOH
3.829
C
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLY A:281 A:281 1.0 0.013 S 129.3 -142.6 1.0 0.013 0.0 HOH
5.015
N
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLY A:281 A:281 0.0 0.0 S 127.1 -138.5 0.0 0.0 0.0 HOH
5.177
N
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 GLY A:281 A:281 2.0 0.027 S 138.2 -141.0 2.0 0.027 0.0 HOH
4.828
N
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLY A:281 A:281 1.0 0.013 S 107.3 -142.8 1.0 0.013 0.0 HOH
3.861
C
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLY A:281 A:281 3.0 0.04 S 125.3 -139.4 3.0 0.04 0.0 HOH
3.626
C
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLY A:281 A:281 2.0 0.027 S 117.6 -139.4 2.0 0.027 0.0 HOH
3.947
C
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLY A:281 A:281 0.0 0.0 S 120.7 -138.2 0.0 0.0 0.0 HOH
3.709
C
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 GLY A:281 A:281 0.0 0.0 S 119.8 -139.3 0.0 0.0 0.0 HOH
3.556
C
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 GLY A:281 A:281 0.0 0.0 S 120.0 -137.6 0.0 0.0 0.0 HOH
3.602
C
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 GLY A:281 A:281 0.0 0.0 T 124.0 -140.1 0.0 0.0 0.0 HOH
3.739
C
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 GLY A:281 A:281 0.0 0.0 T 118.8 -140.0 0.0 0.0 0.0 HOH
3.563
C
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 GLY A:281 A:281 0.0 0.0 T 113.6 -131.0 0.0 0.0 0.0 0XR
HOH
7.401
4.394
O
C
O3
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 GLY A:281 A:281 0.0 0.0 T 118.8 -137.3 0.0 0.0 0.0 HOH
3.905
C
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 GLY A:281 A:281 1.0 0.013 T 104.2 -145.2 1.0 0.013 0.0 HOH
3.624
C
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 GLY A:281 A:281 4.0 0.053 T 124.9 -140.6 4.0 0.053 0.0 HOH
2.903
HA3
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 GLY A:281 A:281 3.0 0.04 T 126.4 -140.5 3.0 0.04 0.0 HOH
2.936
HA3
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 GLY A:281 A:281 5.0 0.067 S 124.7 -143.6 5.0 0.067 0.0 HOH
2.875
HA3
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 GLY A:281 A:281 3.0 0.04 S 119.3 -143.4 3.0 0.04 0.0 HOH
3.694
CA
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 GLY A:281 A:281 3.0 0.04 T 124.2 -142.3 3.0 0.04 0.0 HOH
2.941
HA3
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 GLY A:281 A:281 3.0 0.04 S 124.2 -140.7 3.0 0.04 0.0 HOH
5.112
N
O
GLY B:281 B:281 1.0 0.013 T 124.0 -140.0 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 GLY A:281 A:281 4.0 0.053 S 125.9 -143.4 4.0 0.053 0.0 HOH
2.898
HA3
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 GLY A:281 A:281 4.0 0.053 T 125.2 -142.0 4.0 0.053 0.0 HOH
2.820
HA3
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLY A:281 A:281 1.0 0.013 S 122.8 -141.9 1.0 0.013 0.0 HOH
3.651
C
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLY A:281 A:281 0.0 0.0 S 120.9 -143.4 0.0 0.0 0.0 HOH
3.751
C
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLY A:281 A:281 2.0 0.027 S 122.2 -138.1 2.0 0.027 0.0 HOH
3.605
C
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 GLY A:281 A:281 2.0 0.027 S 120.6 -137.8 2.0 0.027 0.0 HOH
3.794
C
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 GLY A:281 A:281 3.0 0.04 T 125.7 -139.3 3.0 0.04 0.0 HOH
3.674
C
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 GLY A:281 A:281 3.0 0.04 S 124.6 -140.1 3.0 0.04 0.0 HOH
3.591
C
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 GLY A:281 A:281 1.0 0.013 S 129.2 -138.9 1.0 0.013 0.0 HOH
3.715
C
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 GLY A:281 A:281 0.0 0.0 S 121.2 -140.8 0.0 0.0 0.0 HOH
3.912
C
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 GLY A:281 A:281 0.0 0.0 S 118.4 -137.2 0.0 0.0 0.0 HOH
5.372
N
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 GLY A:281 A:281 0.0 0.0 S 115.7 -127.4 0.0 0.0 0.0 HOH
4.855
N
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 GLY A:281 A:281 1.0 0.013 S 124.6 -139.8 1.0 0.013 0.0 HOH
3.637
CA
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 GLY A:281 A:281 0.0 0.0 S 121.2 -135.6 0.0 0.0 0.0 HOH
5.307
N
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 GLY A:281 A:281 1.0 0.013 S 126.5 -143.7 1.0 0.013 0.0 HOH
7.666
CA
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 GLY A:281 A:281 1.0 0.013 S 123.0 -139.4 1.0 0.013 0.0 HOH
3.813
C
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 GLY A:281 A:281 0.0 0.0 S 117.8 -139.9 0.0 0.0 0.0 HOH
4.187
C
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 GLY A:281 A:281 0.0 0.0 S 124.1 -139.7 0.0 0.0 0.0 HOH
7.908
CA
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 GLY A:281 A:281 0.0 0.0 S 126.1 -138.1 0.0 0.0 0.0 HOH
3.503
C
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 GLY A:281 A:281 0.0 0.0 T 118.7 -131.4 0.0 0.0 0.0 GLC
AGL
HOH
7.496
6.852
3.551
O
O
C
C6
O5
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 GLY A:281 A:281 1.0 0.013 S 118.3 -142.4 1.0 0.013 0.0 HOH
7.704
CA
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 GLY A:281 A:281 2.0 0.027 S 132.8 -145.8 2.0 0.027 0.0 HOH
8.129
O
O
GLY B:281 B:281 2.0 0.027 S 132.8 -145.8 2.0 0.027 0.0 HOH
8.496
O
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 GLY A:281 X:281 3.0 0.04 T 121.1 -142.6 3.0 0.04 0.0 HOH
3.533
C
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 GLY A:281 X:281 1.0 0.013 T 120.2 -136.5 1.0 0.013 0.0 HOH
3.585
C
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 GLY A:281 A:281 0.0 0.0 S 118.7 -138.0 0.0 0.0 0.0 HOH
3.686
C
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 GLY A:281 A:281 1.0 0.013 T 116.7 -135.8 1.0 0.013 0.0 GLC
AGL
HOH
7.487
6.727
3.747
O
O
C
C6
O5
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 GLY A:281 A:281 0.0 0.0 T 119.4 -138.5 0.0 0.0 0.0 HOH
3.720
C
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 GLY A:281 X:281 1.0 0.013 T 118.4 -135.9 1.0 0.013 0.0 HOH
3.631
C
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 GLY A:281 A:281 0.0 0.0 T 114.5 -140.4 0.0 0.0 0.0 HOH
3.730
C
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 GLY A:281 A:281 0.0 0.0 T 115.3 -131.2 0.0 0.0 0.0 GLC
AGL
HMC
HOH
7.664
6.778
9.651
3.691
O
O
O
C
C6
O5
C1
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 GLY A:281 A:281 1.0 0.013 S 110.0 -137.4 1.0 0.013 0.0 HOH
3.754
C
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 GLY A:281 A:281 0.0 0.0 S 112.5 -136.4 0.0 0.0 0.0 HOH
3.656
C
O
GLY B:281 B:281 0.0 0.0 S 115.9 -140.5 NA NA NA
GLY C:281 C:281 0.0 0.0 S 112.5 -138.6 NA NA NA
GLY D:281 D:281 0.0 0.0 S 114.8 -137.8 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 GLY A:281 A:281 2.0 0.027 S 125.8 -151.3 2.0 0.027 0.0 HOH
2.254
N
O
GLY C:281 C:281 0.0 0.0 S 119.1 -152.5 NA NA NA
GLY E:281 E:281 1.0 0.013 S 124.6 -136.6 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 GLY A:281 A:281 0.0 0.0 T 110.4 -134.5 0.0 0.0 0.0 HOH
3.816
C
O
GLY B:281 B:281 1.0 0.013 T 110.7 -134.1 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 GLY A:281 A:281 0.0 0.0 S 117.0 -138.0 0.0 0.0 0.0 HOH
3.633
C
O
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 GLY A:281 A:281 0.0 0.0 T 123.5 -132.7 0.0 0.0 0.0 HOH
3.552
C
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 GLY A:281 A:281 0.0 0.0 S 117.8 -141.3 0.0 0.0 0.0 HOH
3.001
HA3
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 GLY A:281 A:281 0.0 0.0 S 113.2 -138.7 0.0 0.0 0.0 HOH
2.812
HA3
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 GLY A:281 A:281 2.0 0.027 S 115.0 -138.3 2.0 0.027 0.0 GLC
GLC
HOH
7.679
6.658
3.618
O
O
C
C6
O5
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 GLY A:281 A:281 2.0 0.027 S 111.4 -138.2 2.0 0.027 0.0 HOH
3.806
CA
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 GLY A:281 A:281 2.0 0.027 T 120.6 -134.0 2.0 0.027 0.0 HOH
3.825
C
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 GLY A:281 A:281 1.0 0.013 S 110.4 -139.8 1.0 0.013 0.0 BGC
HOH
7.638
3.668
O
CA
C6
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 GLY A:281 A:281 2.0 0.027 T 115.1 -135.7 2.0 0.027 0.0 GLC
GLC
HOH
7.612
6.927
3.620
O
O
C
C6
O5
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 GLY A:281 A:281 2.0 0.027 T 116.3 -133.6 2.0 0.027 0.0 GLC
GLC
HOH
7.786
6.775
3.627
O
O
C
C6
O5
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 GLY A:281 P:281 1.0 0.013 T 102.5 -131.6 1.0 0.013 0.0 HOH
4.914
N
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 GLY A:281 A:281 0.0 0.0 S 116.6 -132.4 0.0 0.0 0.0 HOH
3.856
C
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 GLY A:281 A:281 0.0 0.0 S 116.4 -131.0 0.0 0.0 0.0 GLC
BGC
HOH
7.958
7.329
3.643
O
O
CA
C6
O5
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 GLY A:281 A:281 0.0 0.0 T 113.8 -135.5 0.0 0.0 0.0 HOH
3.591
C
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 GLY A:296 A:296 2.0 0.027 T 116.9 -138.4
af-p04746-f1 1 P04746 98.83 0.0 GLY A:296 A:296 1.0 0.013 S 113.9 -136.2
af-p0dte7-f1 1 P0DTE7 97.46 0.0 GLY A:296 A:296 2.0 0.027 S 115.3 -138.6
af-p0dte8-f1 1 P0DTE8 97.46 0.0 GLY A:296 A:296 2.0 0.027 S 115.5 -138.7
af-p0dub6-f1 1 P0DUB6 97.46 0.0 GLY A:296 A:296 2.0 0.027 S 116.6 -138.2