Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104117900 . G A CCDS782.1:NM_020978.4:c.934Gat>Aat_NP_066188.1:p.312D>N Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 ASP A:297 A:297 2.0 0.013 -143.4 162.4 2.0 0.013 0.0 CL
HOH
7.287
2.742
O
O
CL
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 ASP A:297 A:297 3.0 0.02 -140.6 160.8 3.0 0.02 0.0 CL
HOH
7.368
2.763
O
O
CL
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 ASP A:297 A:297 2.0 0.013 -144.0 160.9 2.0 0.013 0.0 CL
HOH
7.413
2.760
O
O
CL
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 ASP A:297 A:297 2.0 0.013 -139.0 161.5 2.0 0.013 0.0 CL
HOH
7.367
2.726
O
OD2
CL
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 ASP A:297 A:297 2.0 0.013 -133.0 160.4 2.0 0.013 0.0 CL
HOH
7.310
2.644
O
OD2
CL
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 ASP A:297 A:297 2.0 0.013 -143.8 159.0 2.0 0.013 0.0 CL
HOH
7.428
2.538
O
OD2
CL
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 ASP A:297 A:297 2.0 0.013 -139.3 159.3 2.0 0.013 0.0 CL
HOH
7.346
2.762
O
OD2
CL
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 ASP A:297 A:297 3.0 0.02 -140.7 157.2 3.0 0.02 0.0 CL
HOH
7.472
2.709
O
OD2
CL
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 ASP A:297 A:297 2.0 0.013 -136.6 162.0 2.0 0.013 0.0 CL
HOH
7.216
2.663
O
O
CL
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 ASP A:297 A:297 3.0 0.02 -139.0 161.4 3.0 0.02 0.0 CL
HOH
7.283
2.683
O
OD2
CL
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 ASP A:297 A:297 3.0 0.02 -140.5 160.6 3.0 0.02 0.0 CL
HOH
7.365
2.708
O
OD2
CL
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 ASP A:297 A:297 1.0 0.007 -138.7 159.9 1.0 0.007 0.0 CL
HOH
7.399
2.736
O
OD2
CL
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 ASP A:297 A:297 2.0 0.013 -138.5 163.7 2.0 0.013 0.0 CL
HOH
7.255
2.897
O
O
CL
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 ASP A:297 A:297 3.0 0.02 -140.3 162.0 3.0 0.02 0.0 CL
HOH
7.363
2.765
O
O
CL
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 ASP A:297 A:297 2.0 0.013 -137.7 160.3 2.0 0.013 0.0 CL
HOH
7.387
2.698
O
OD2
CL
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 ASP A:297 A:297 3.0 0.02 -143.8 163.0 3.0 0.02 0.0 CL
HOH
7.321
2.672
O
OD2
CL
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 ASP A:297 A:297 1.0 0.007 -154.0 164.5 1.0 0.007 0.0 NO2
HOH
6.705
2.567
O
O
O2
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 ASP A:297 A:297 2.0 0.013 -146.6 159.7 2.0 0.013 0.0 NO2
HOH
6.978
2.679
O
O
N
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 ASP A:297 A:297 3.0 0.02 -144.1 161.3 3.0 0.02 0.0 NO3
HOH
6.184
2.649
O
O
O3
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 ASP A:297 A:297 3.0 0.02 -143.5 161.5 3.0 0.02 0.0 NO3
HOH
6.164
2.630
O
O
O3
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 ASP A:297 A:297 1.0 0.007 -139.2 162.5 1.0 0.007 0.0 CL
HOH
7.218
2.709
O
O
CL
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 ASP A:297 A:297 2.0 0.013 -144.3 161.3 2.0 0.013 0.0 CL
HOH
7.202
2.712
O
O
CL
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 ASP A:297 A:297 2.0 0.013 -140.5 161.2 2.0 0.013 0.0 CL
HOH
7.270
2.698
O
OD2
CL
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 ASP A:297 A:297 2.0 0.013 -142.8 159.3 2.0 0.013 0.0 CL
HOH
7.226
2.729
O
OD2
CL
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 ASP A:297 A:297 10.0 0.067 -85.2 64.7 10.0 0.067 0.0 CL
HOH
7.764
2.713
O
OD1
CL
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 ASP A:297 A:297 2.0 0.013 -143.5 160.3 2.0 0.013 0.0 CL
HOH
7.252
2.719
O
O
CL
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 ASP A:297 A:297 2.0 0.013 -135.7 161.9 2.0 0.013 0.0 CL
HOH
7.197
2.667
O
OD2
CL
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 ASP A:297 A:297 2.0 0.013 -136.6 159.6 2.0 0.013 0.0 CL
HOH
7.251
2.647
O
OD2
CL
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 ASP A:297 A:297 1.0 0.007 -136.7 160.9 1.0 0.007 0.0 5J7
CL
HOH
9.648
7.134
2.609
C
O
OD2
H63
CL
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 ASP A:297 A:297 3.0 0.02 -134.2 161.7 3.0 0.02 0.0 CL
HOH
7.267
2.695
O
OD2
CL
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 ASP A:297 A:297 3.0 0.02 -136.1 159.3 3.0 0.02 0.0 CL
HOH
7.405
2.562
O
OD2
CL
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 ASP A:297 A:297 1.0 0.007 -137.4 159.6 1.0 0.007 0.0 CL
HOH
7.236
2.642
O
OD2
CL
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 ASP A:297 A:297 1.0 0.007 -134.6 161.9 1.0 0.007 0.0 CL
HOH
7.081
2.569
O
OD2
CL
O
ASP B:297 B:297 0.0 0.0 -135.9 163.8 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 ASP A:297 A:297 2.0 0.013 -139.3 160.1 2.0 0.013 0.0 CL
ZXU
HOH
7.185
9.666
2.646
O
C
OD2
CL
HO61
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 ASP A:297 A:297 1.0 0.007 -137.4 161.0 1.0 0.007 0.0 ZXY
CL
HOH
9.707
7.187
2.653
C
O
OD2
HO38
CL
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 ASP A:297 A:297 3.0 0.02 -135.8 159.5 3.0 0.02 0.0 HOH
2.563
OD2
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 ASP A:297 A:297 3.0 0.02 -140.2 161.3 3.0 0.02 0.0 HOH
2.630
OD2
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 ASP A:297 A:297 3.0 0.02 -137.8 159.9 3.0 0.02 0.0 CL
HOH
7.414
2.713
O
O
CL
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 ASP A:297 A:297 3.0 0.02 -138.4 161.3 3.0 0.02 0.0 CL
HOH
7.386
2.737
O
O
CL
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 ASP A:297 A:297 2.0 0.013 -141.1 158.0 2.0 0.013 0.0 NO3
HOH
6.769
2.696
O
O
O3
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 ASP A:297 A:297 2.0 0.013 -140.3 160.5 2.0 0.013 0.0 CL
HOH
7.201
2.742
O
OD2
CL
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 ASP A:297 A:297 3.0 0.02 -142.7 160.7 3.0 0.02 0.0 NO3
HOH
6.721
2.723
O
OD2
O3
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 ASP A:297 A:297 1.0 0.007 -147.9 157.5 1.0 0.007 0.0 HOH
2.732
OD2
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 ASP A:297 A:297 2.0 0.013 -138.4 160.0 2.0 0.013 0.0 CL
HOH
7.343
2.606
O
OD2
CL
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 ASP A:297 A:297 3.0 0.02 -140.4 161.5 3.0 0.02 0.0 CL
HOH
7.398
2.629
O
OD2
CL
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 ASP A:297 A:297 1.0 0.007 -133.4 163.2 1.0 0.007 0.0 CL
HOH
7.393
2.819
O
OD2
CL
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 ASP A:297 A:297 3.0 0.02 -143.3 160.6 3.0 0.02 0.0 HOH
2.695
OD2
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 ASP A:297 A:297 1.0 0.007 -141.9 161.2 1.0 0.007 0.0 CL
HOH
7.310
2.672
O
OD2
CL
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 ASP A:297 A:297 4.0 0.027 -147.0 163.3 4.0 0.027 0.0 HOH
2.774
OD2
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 ASP A:297 A:297 2.0 0.013 -144.5 159.1 2.0 0.013 0.0 HOH
2.876
O
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 ASP A:297 A:297 2.0 0.013 -141.1 161.8 2.0 0.013 0.0 CL
HOH
7.323
2.669
O
O
CL
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 ASP A:297 A:297 2.0 0.013 -149.9 158.4 2.0 0.013 0.0 CL
HOH
7.413
2.604
O
O
CL
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 ASP A:297 A:297 2.0 0.013 -133.7 163.7 2.0 0.013 0.0 CL
HOH
7.367
2.668
O
OD2
CL
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 ASP A:297 A:297 2.0 0.013 -138.9 163.1 2.0 0.013 0.0 CL
HOH
7.215
2.530
O
OD2
CL
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 ASP A:297 A:297 2.0 0.013 -129.7 148.3 2.0 0.013 0.0 CL
HOH
7.372
4.062
C
OD1
CL
O
ASP B:297 B:297 3.0 0.02 -129.7 148.3 3.0 0.02 0.0 CL
HOH
7.373
4.062
C
OD1
CL
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 ASP A:297 X:297 3.0 0.02 -135.5 160.9 3.0 0.02 0.0 CL
HOH
7.410
2.671
O
OD2
CL
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 ASP A:297 X:297 2.0 0.013 -134.3 160.9 2.0 0.013 0.0 CL
HOH
7.375
2.667
O
OD2
CL
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 ASP A:297 A:297 3.0 0.02 -137.0 164.4 3.0 0.02 0.0 CL
HOH
7.363
2.703
O
OD2
CL
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 ASP A:297 A:297 2.0 0.013 -136.7 162.6 2.0 0.013 0.0 CL
HOH
7.427
2.648
O
OD2
CL
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 ASP A:297 A:297 2.0 0.013 -136.6 158.2 2.0 0.013 0.0 CL
HOH
7.351
2.671
O
OD2
CL
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 ASP A:297 X:297 2.0 0.013 -134.3 160.2 2.0 0.013 0.0 CL
HOH
7.417
2.746
O
OD2
CL
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 ASP A:297 A:297 2.0 0.013 -134.4 162.6 2.0 0.013 0.0 CL
HOH
7.387
2.753
O
OD2
CL
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 ASP A:297 A:297 3.0 0.02 -135.9 161.7 3.0 0.02 0.0 CL
HOH
7.403
2.543
O
OD2
CL
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 ASP A:297 A:297 3.0 0.02 -136.8 163.7 3.0 0.02 0.0 CL
HOH
7.383
2.731
O
OD2
CL
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 ASP A:297 A:297 2.0 0.013 -143.2 158.0 2.0 0.013 0.0 CL
HOH
7.393
2.776
O
OD2
CL
O
ASP B:297 B:297 2.0 0.013 -142.6 158.7 NA NA NA
ASP C:297 C:297 3.0 0.02 -143.5 158.3 NA NA NA
ASP D:297 D:297 1.0 0.007 -140.9 160.4 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 ASP A:297 A:297 2.0 0.013 -146.0 168.4 2.0 0.013 0.0 CL
HOH
7.287
2.734
O
OD2
CL
O
ASP C:297 C:297 2.0 0.013 -148.6 159.4 NA NA NA
ASP E:297 E:297 2.0 0.013 -144.2 169.2 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 ASP A:297 A:297 3.0 0.02 -141.7 164.0 3.0 0.02 0.0 HOH
2.776
O
O
ASP B:297 B:297 3.0 0.02 -146.0 158.6 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 ASP A:297 A:297 2.0 0.013 -145.7 159.1 2.0 0.013 0.0 CL
HOH
6.811
1.765
O
O
CL
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 ASP A:297 A:297 2.0 0.013 -139.9 161.7 2.0 0.013 0.0 CL
HOH
7.531
2.729
O
O
CL
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 ASP A:297 A:297 2.0 0.013 -130.6 158.6 2.0 0.013 0.0 CL
HOH
7.336
2.636
O
OD2
CL
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 ASP A:297 A:297 3.0 0.02 -130.6 161.3 3.0 0.02 0.0 CL
HOH
7.308
2.688
O
OD1
CL
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 ASP A:297 A:297 2.0 0.013 -129.7 161.3 2.0 0.013 0.0 CL
HOH
7.383
2.731
O
OD2
CL
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 ASP A:297 A:297 3.0 0.02 -146.2 153.1 3.0 0.02 0.0 CL
HOH
7.514
2.705
O
OD2
CL
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 ASP A:297 A:297 2.0 0.013 -139.3 160.7 2.0 0.013 0.0 CL
HOH
7.401
2.757
O
O
CL
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 ASP A:297 A:297 3.0 0.02 -145.7 159.6 3.0 0.02 0.0 CL
HOH
7.367
2.695
O
O
CL
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 ASP A:297 A:297 2.0 0.013 -136.2 161.0 2.0 0.013 0.0 CL
EDO
HOH
7.336
6.928
2.684
O
CB
OD2
CL
C1
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 ASP A:297 A:297 2.0 0.013 -144.6 159.3 2.0 0.013 0.0 CL
HOH
7.168
2.705
O
O
CL
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 ASP A:297 P:297 3.0 0.02 -82.4 -91.9 3.0 0.02 0.0 CL
HOH
7.609
2.609
O
OD2
CL
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 ASP A:297 A:297 2.0 0.013 -145.3 161.5 2.0 0.013 0.0 CL
HOH
7.334
2.797
O
OD2
CL
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 ASP A:297 A:297 2.0 0.013 -143.6 161.6 2.0 0.013 0.0 CL
HOH
7.399
2.701
O
O
CL
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 ASP A:297 A:297 1.0 0.007 -136.9 160.7 1.0 0.007 0.0 CL
HOH
7.366
2.382
O
OD2
CL
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 ASP A:312 A:312 1.0 0.007 -136.5 161.1
af-p04746-f1 1 P04746 98.83 0.0 ASP A:312 A:312 1.0 0.007 -139.4 162.5
af-p0dte7-f1 1 P0DTE7 97.46 0.0 ASP A:312 A:312 2.0 0.013 -138.0 159.5
af-p0dte8-f1 1 P0DTE8 97.46 0.0 ASP A:312 A:312 1.0 0.007 -138.2 159.8
af-p0dub6-f1 1 P0DUB6 97.46 0.0 ASP A:312 A:312 1.0 0.007 -135.7 160.1