Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104120156 . T A CCDS782.1:NM_020978.4:c.1146atT>atA_NP_066188.1:p.382I>I Homo sapiens amylase, alpha 2B (pancreatic) (AMY2B), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3old 1 P04746 98.99 0.0 X-RAY
2011-04-13 ILE A:367 A:367 6.0 0.034 E -54.2 136.8 6.0 0.034 0.0 HOH
3.163
N
O
3ole 1 P04746 98.99 0.0 X-RAY
2011-04-13 ILE A:367 A:367 6.0 0.034 E -58.0 130.9 6.0 0.034 0.0 HOH
2.940
O
O
3olg 1 P04746 98.99 0.0 X-RAY
2011-04-13 ILE A:367 A:367 6.0 0.034 E -59.2 131.6 6.0 0.034 0.0 HOH
3.043
N
O
3oli 1 P04746 98.99 0.0 X-RAY
2011-04-13 ILE A:367 A:367 7.0 0.04 E -58.2 134.4 7.0 0.04 0.0 HOH
2.614
O
O
6z8l 1 P04746 98.79 0.0 X-RAY
2020-12-02 ILE A:367 A:367 8.0 0.046 E -61.5 136.2 8.0 0.046 0.0 HOH
2.152
H
O
1b2y 1 P04746 98.79 0.0 X-RAY
2000-02-16 ILE A:367 A:367 7.0 0.04 E -57.8 126.5 7.0 0.04 0.0 HOH
2.794
N
O
1bsi 1 P04746 98.59 0.0 X-RAY
1999-05-18 ILE A:367 A:367 6.0 0.034 E -55.4 137.2 6.0 0.034 0.0 HOH
3.163
N
O
1cpu 1 P04746 98.59 0.0 X-RAY
1999-06-14 ILE A:367 A:367 6.0 0.034 E -57.8 134.7 6.0 0.034 0.0 HOH
2.964
N
O
1hny 1 P04746 98.59 0.0 X-RAY
1996-03-08 ILE A:367 A:367 9.0 0.051 E -61.3 128.3 9.0 0.051 0.0 HOH
2.662
O
O
1u2y 1 P04746 98.59 0.0 X-RAY
2004-09-07 ILE A:367 A:367 6.0 0.034 E -56.7 133.2 6.0 0.034 0.0 HOH
3.081
N
O
1u30 1 P04746 98.59 0.0 X-RAY
2004-09-07 ILE A:367 A:367 4.0 0.023 E -56.0 131.8 4.0 0.023 0.0 HOH
3.121
N
O
1u33 1 P04746 98.59 0.0 X-RAY
2004-09-07 ILE A:367 A:367 5.0 0.029 E -55.1 133.8 5.0 0.029 0.0 HOH
3.127
N
O
1xcw 1 P04746 98.59 0.0 X-RAY
2004-12-07 ILE A:367 A:367 5.0 0.029 E -51.8 133.5 5.0 0.029 0.0 HOH
2.962
N
O
1xcx 1 P04746 98.59 0.0 X-RAY
2004-12-07 ILE A:367 A:367 6.0 0.034 E -53.0 131.8 6.0 0.034 0.0 HOH
3.079
N
O
1xd0 1 P04746 98.59 0.0 X-RAY
2004-12-07 ILE A:367 A:367 7.0 0.04 E -54.6 133.1 7.0 0.04 0.0 HOH
3.114
N
O
1xd1 1 P04746 98.59 0.0 X-RAY
2004-12-07 ILE A:367 A:367 7.0 0.04 E -51.6 133.8 7.0 0.04 0.0 HOH
3.129
N
O
2qmk 1 P04746 98.59 0.0 X-RAY
2008-03-25 ILE A:367 A:367 5.0 0.029 E -48.8 129.6 5.0 0.029 0.0 HOH
3.504
N
O
2qv4 1 P04746 98.59 0.0 X-RAY
2008-03-25 ILE A:367 A:367 4.0 0.023 E -53.6 133.8 4.0 0.023 0.0 HOH
3.003
N
O
3bai 1 P04746 98.59 0.0 X-RAY
2008-03-25 ILE A:367 A:367 6.0 0.034 E -55.3 135.2 6.0 0.034 0.0 HOH
3.109
N
O
3baj 1 P04746 98.59 0.0 X-RAY
2008-03-25 ILE A:367 A:367 7.0 0.04 E -56.4 139.1 7.0 0.04 0.0 HOH
3.196
N
O
3baw 1 P04746 98.59 0.0 X-RAY
2008-03-25 ILE A:367 A:367 6.0 0.034 E -52.6 133.3 6.0 0.034 0.0 HOH
3.001
N
O
3ij7 1 P04746 98.59 0.0 X-RAY
2009-10-27 ILE A:367 A:367 6.0 0.034 E -49.8 130.9 6.0 0.034 0.0 HOH
2.934
N
O
3ij8 1 P04746 98.59 0.0 X-RAY
2009-10-27 ILE A:367 A:367 6.0 0.034 E -56.5 131.0 6.0 0.034 0.0 HOH
2.672
O
O
3ij9 1 P04746 98.59 0.0 X-RAY
2009-10-27 ILE A:367 A:367 6.0 0.034 E -54.0 133.1 6.0 0.034 0.0 HOH
2.992
N
O
4gqq 1 P04746 98.59 0.0 X-RAY
2012-10-24 ILE A:367 A:367 0.0 0.0 E -57.9 145.9 0.0 0.0 0.0 0XR
HOH
8.070
3.602
O
CG2
O3
O
4gqr 1 P04746 98.59 0.0 X-RAY
2012-10-24 ILE A:367 A:367 6.0 0.034 E -53.8 132.8 6.0 0.034 0.0 HOH
2.912
O
O
4w93 1 P04746 98.59 0.0 X-RAY
2015-07-15 ILE A:367 A:367 7.0 0.04 E -63.0 134.6 7.0 0.04 0.0 HOH
2.684
O
O
4x9y 1 P04746 98.59 0.0 X-RAY
2014-12-31 ILE A:367 A:367 6.0 0.034 E -60.8 135.6 6.0 0.034 0.0 HOH
2.100
H
O
5e0f 1 P04746 98.59 0.0 X-RAY
2016-09-07 ILE A:367 A:367 8.0 0.046 E -63.5 136.1 8.0 0.046 0.0 HOH
2.106
H
O
5emy 1 P04746 98.59 0.0 X-RAY
2016-07-06 ILE A:367 A:367 6.0 0.034 E -60.6 135.5 6.0 0.034 0.0 HOH
2.111
H
O
5kez 1 P04746 98.59 0.0 X-RAY
2017-03-29 ILE A:367 A:367 9.0 0.051 E -65.7 135.3 9.0 0.051 0.0 HOH
2.582
O
O
5u3a 1 P04746 98.59 0.0 X-RAY
2017-12-06 ILE A:367 A:367 7.0 0.04 E -61.5 135.9 7.0 0.04 0.0 HOH
2.081
H
O
5va9 1 P04746 98.59 0.0 X-RAY
2018-03-28 ILE A:367 A:367 6.0 0.034 E -61.4 131.8 6.0 0.034 0.0 HOH
5.297
CD1
O
ILE B:367 B:367 3.0 0.017 E -62.5 131.5 NA NA NA
6obx 1 P04746 98.59 0.0 X-RAY
2020-02-12 ILE A:367 A:367 6.0 0.034 E -61.2 134.5 6.0 0.034 0.0 HOH
2.101
H
O
6ocn 1 P04746 98.59 0.0 X-RAY
2020-02-12 ILE A:367 A:367 6.0 0.034 E -61.0 135.0 6.0 0.034 0.0 HOH
2.088
H
O
1xgz 1 P04746 98.39 0.0 X-RAY
2005-05-24 ILE A:367 A:367 8.0 0.046 E -55.5 133.5 8.0 0.046 0.0 HOH
2.720
O
O
1xh0 1 P04746 98.39 0.0 X-RAY
2005-05-24 ILE A:367 A:367 5.0 0.029 E -57.4 131.4 5.0 0.029 0.0 HOH
2.956
O
O
1xh1 1 P04746 98.39 0.0 X-RAY
2005-05-24 ILE A:367 A:367 7.0 0.04 E -52.2 127.4 7.0 0.04 0.0 HOH
3.139
N
O
1xh2 1 P04746 98.39 0.0 X-RAY
2005-05-24 ILE A:367 A:367 5.0 0.029 E -50.7 130.2 5.0 0.029 0.0 HOH
3.264
O
O
3bak 1 P04746 98.39 0.0 X-RAY
2008-03-25 ILE A:367 A:367 5.0 0.029 E -51.7 133.3 5.0 0.029 0.0 HOH
3.228
N
O
3bax 1 P04746 98.39 0.0 X-RAY
2008-03-25 ILE A:367 A:367 6.0 0.034 E -53.4 133.3 6.0 0.034 0.0 HOH
3.169
N
O
3bay 1 P04746 98.39 0.0 X-RAY
2008-03-25 ILE A:367 A:367 6.0 0.034 E -56.3 135.7 6.0 0.034 0.0 HOH
3.385
N
O
1kgw 1 P04746 98.39 0.0 X-RAY
2002-01-16 ILE A:367 A:367 4.0 0.023 E -57.4 133.1 4.0 0.023 0.0 HOH
3.006
O
O
2cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 ILE A:367 A:367 6.0 0.034 E -55.0 133.3 6.0 0.034 0.0 HOH
2.918
O
O
3cpu 1 P04746 98.39 0.0 X-RAY
2001-06-30 ILE A:367 A:367 4.0 0.023 E -57.5 136.3 4.0 0.023 0.0 HOH
2.922
O
O
5td4 1 P04746 98.39 0.0 X-RAY
2016-11-02 ILE A:367 A:367 8.0 0.046 E -62.8 135.9 8.0 0.046 0.0 GLC
GLC
GLC
HOH
3.752
6.854
9.357
2.915
O
O
N
O
C2
C1
C5
O
1kgx 1 P04746 98.39 0.0 X-RAY
2002-01-16 ILE A:367 A:367 6.0 0.034 E -51.3 133.7 6.0 0.034 0.0 HOH
2.631
CG1
O
1kbb 1 P04746 98.39 0.0 X-RAY
2002-04-10 ILE A:367 A:367 7.0 0.04 E -60.5 128.1 7.0 0.04 0.0 HOH
2.795
O
O
1kgu 1 P04746 98.39 0.0 X-RAY
2002-01-16 ILE A:367 A:367 7.0 0.04 E -59.7 127.1 7.0 0.04 0.0 HOH
3.138
N
O
1kb3 1 P04746 98.39 0.0 X-RAY
2002-05-01 ILE A:367 A:367 6.0 0.034 E -54.2 133.8 6.0 0.034 0.0 HOH
2.589
CG1
O
1kbk 1 P04746 98.39 0.0 X-RAY
2002-04-10 ILE A:367 A:367 7.0 0.04 E -54.1 131.5 7.0 0.04 0.0 HOH
3.084
N
O
1c8q 1 P04745 97.58 0.0 X-RAY
2001-06-13 THR A:367 A:367 5.0 0.036 E -49.1 130.2 5.0 0.036 0.0 HOH
2.647
OG1
O
1mfv 1 P04745 97.58 0.0 X-RAY
2002-11-20 THR A:367 A:367 7.0 0.05 E -60.5 129.6 7.0 0.05 0.0 HOH
2.715
O
O
1smd 1 P04745 97.58 0.0 X-RAY
1996-07-11 THR A:367 A:367 7.0 0.05 E -61.1 131.5 7.0 0.05 0.0 HOH
2.694
O
O
1xv8 1 P04745 97.58 0.0 X-RAY
2005-10-11 THR A:367 A:367 7.0 0.05 B -59.3 128.2 7.0 0.05 0.0 HOH
2.700
OG1
O
THR B:367 B:367 7.0 0.05 B -59.3 128.2 7.0 0.05 0.0 HOH
2.700
OG1
O
1q4n 1 P04745 97.38 0.0 X-RAY
2004-03-16 THR A:367 X:367 5.0 0.036 E -50.0 128.9 5.0 0.036 0.0 HOH
2.682
O
O
1z32 1 P04745 97.38 0.0 X-RAY
2005-05-31 THR A:367 X:367 8.0 0.057 E -56.7 131.6 8.0 0.057 0.0 HOH
2.736
O
O
1jxj 1 P04745 97.38 0.0 X-RAY
2001-09-14 THR A:367 A:367 6.0 0.043 E -58.9 134.3 6.0 0.043 0.0 HOH
2.620
OG1
O
1nm9 1 P04745 97.38 0.0 X-RAY
2004-01-20 THR A:367 A:367 6.0 0.043 E -54.2 128.9 6.0 0.043 0.0 HOH
2.641
O
O
3blk 1 P04745 97.38 0.0 X-RAY
2008-11-25 THR A:367 A:367 8.0 0.057 E -55.9 127.1 8.0 0.057 0.0 HOH
2.790
OG1
O
3blp 1 P04745 97.38 0.0 X-RAY
2008-11-18 THR A:367 X:367 8.0 0.057 E -55.9 130.4 8.0 0.057 0.0 HOH
2.771
OG1
O
1jxk 1 P04745 96.57 0.0 X-RAY
2001-09-14 THR A:362 A:362 7.0 0.05 E -52.5 134.6 7.0 0.05 0.0 HOH
2.586
OG1
O
1mfu 1 P04745 96.57 0.0 X-RAY
2002-11-20 THR A:362 A:362 7.0 0.05 E -54.5 132.3 7.0 0.05 0.0 HOH
2.717
OG1
O
3dhp 1 P04745 96.37 0.0 X-RAY
2008-07-01 THR A:367 A:367 7.0 0.05 E -60.4 135.4 7.0 0.05 0.0 HOH
2.838
OG1
O
1kxq 1 P00690 87.1 0.0 X-RAY
2002-06-19 ILE A:367 A:367 11.0 0.063 E -59.1 132.8 11.0 0.063 0.0 HOH
2.589
O
O
ILE B:367 B:367 14.0 0.08 E -59.4 134.6 NA NA NA
ILE C:367 C:367 13.0 0.074 E -57.8 135.0 NA NA NA
ILE D:367 D:367 7.0 0.04 E -59.1 133.0 NA NA NA
1kxt 1 P00690 87.1 0.0 X-RAY
2002-06-19 ILE A:367 A:367 13.0 0.074 E -55.4 138.8 13.0 0.074 0.0 HOH
3.460
O
O
ILE C:367 C:367 12.0 0.069 E -54.3 126.9 NA NA NA
ILE E:367 E:367 13.0 0.074 E -49.3 137.2 NA NA NA
1kxv 1 P00690 87.1 0.0 X-RAY
2002-06-19 ILE A:367 A:367 7.0 0.04 E -57.9 135.7 7.0 0.04 0.0 HOH
2.735
O
O
ILE B:367 B:367 12.0 0.069 E -55.0 129.8 NA NA NA
1dhk 1 P00690 87.1 0.0 X-RAY
1997-12-24 ILE A:367 A:367 5.0 0.029 E -53.9 128.9 5.0 0.029 0.0 HOH
1.681
H
H2
1ppi 1 P00690 87.1 0.0 X-RAY
1995-05-24 ILE A:367 A:367 5.0 0.029 E -59.9 129.4 5.0 0.029 0.0 HOH
2.874
N
O
3l2l 1 P00690 86.9 0.0 X-RAY
2010-04-14 ILE A:367 A:367 7.0 0.04 E -62.3 133.6 7.0 0.04 0.0 HOH
2.120
H
O
3l2m 1 P00690 86.9 0.0 X-RAY
2010-04-14 ILE A:367 A:367 6.0 0.034 E -63.7 132.6 6.0 0.034 0.0 HOH
2.170
H
O
1ua3 1 P00690 86.9 0.0 X-RAY
2003-10-14 ILE A:367 A:367 7.0 0.04 E -65.9 135.4 7.0 0.04 0.0 HOH
2.791
O
O
1vah 1 P00690 86.9 0.0 X-RAY
2005-04-26 ILE A:367 A:367 9.0 0.051 E -61.9 128.2 9.0 0.051 0.0 HOH
3.012
N
O
1jfh 1 P00690 86.9 0.0 X-RAY
1998-12-02 ILE A:367 A:367 6.0 0.034 E -57.0 131.5 6.0 0.034 0.0 HOH
2.879
N
O
1ose 1 P00690 86.69 0.0 X-RAY
1997-04-01 ILE A:367 A:367 6.0 0.034 E -59.5 128.9 6.0 0.034 0.0 HOH
2.939
N
O
1hx0 1 P00690 86.69 0.0 X-RAY
2001-08-08 ILE A:367 A:367 8.0 0.046 E -64.5 135.6 8.0 0.046 0.0 EDO
EDO
HOH
8.603
5.962
2.722
CA
O
O
O2
O2
O
1wo2 1 P00690 86.69 0.0 X-RAY
2005-03-15 ILE A:367 A:367 6.0 0.034 E -58.1 133.0 6.0 0.034 0.0 EDO
HOH
8.335
2.765
CG1
O
O1
O
1bvn 1 P00690 86.69 0.0 X-RAY
1998-09-23 ILE A:367 P:367 7.0 0.04 B -46.2 129.2 7.0 0.04 0.0 HOH
4.462
CG2
O
1pif 1 P00690 86.49 0.0 X-RAY
1996-12-07 ILE A:367 A:367 8.0 0.046 E -58.4 132.1 8.0 0.046 0.0 HOH
2.843
N
O
1pig 1 P00690 86.49 0.0 X-RAY
1996-12-07 ILE A:367 A:367 8.0 0.046 E -59.0 133.2 8.0 0.046 0.0 HOH
2.989
N
O
4x0n 1 P00690 86.49 0.0 X-RAY
2015-11-25 ILE A:367 A:367 8.0 0.046 E -64.0 135.8 8.0 0.046 0.0 HOH
2.709
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19961-f1 1 P19961 100.0 0.0 ILE A:382 A:382 6.0 0.034 E -60.3 132.2
af-p04746-f1 1 P04746 98.83 0.0 ILE A:382 A:382 2.0 0.011 E -60.8 128.4
af-p0dte7-f1 1 P0DTE7 97.46 0.0 THR A:382 A:382 4.0 0.029 E -59.1 130.0
af-p0dte8-f1 1 P0DTE8 97.46 0.0 THR A:382 A:382 5.0 0.036 E -58.5 130.1
af-p0dub6-f1 1 P0DUB6 97.46 0.0 THR A:382 A:382 3.0 0.021 E -58.5 129.0