Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104160117 . C A CCDS783.1:NM_000699.2:c.55Cca>Aca_NP_000690.1:p.19P>T Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 PRO A:4 A:4 14.0 0.097 -66.2 -16.2 14.0 0.097 0.0 PCA
HOH
5.891
6.919
N
N
O
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 PRO A:4 A:4 17.0 0.117 -67.1 -21.4 17.0 0.117 0.0 HOH
4.781
N
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 PRO A:4 A:4 16.0 0.11 -63.9 -20.6 16.0 0.11 0.0 HOH
4.755
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 PRO A:4 A:4 14.0 0.097 -64.7 -15.8 14.0 0.097 0.0 HOH
4.083
C
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:4 A:4 18.0 0.124 -65.1 -22.8 18.0 0.124 0.0 HOH
4.803
N
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:4 A:4 16.0 0.11 -59.7 -24.8 16.0 0.11 0.0 HOH
4.957
N
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:4 A:4 14.0 0.097 -61.9 -22.7 14.0 0.097 0.0 HOH
4.992
N
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:4 A:4 31.0 0.214 -89.4 118.4 31.0 0.214 0.0 HOH
4.860
N
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:4 A:4 20.0 0.138 -64.8 -24.7 20.0 0.138 0.0 HOH
4.839
N
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:4 A:4 14.0 0.097 -64.1 -22.2 14.0 0.097 0.0 HOH
4.980
N
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:4 A:4 20.0 0.138 -63.6 -24.1 20.0 0.138 0.0 HOH
5.113
N
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:4 A:4 17.0 0.117 -65.7 -14.8 17.0 0.117 0.0 HOH
3.642
CG
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:4 A:4 20.0 0.138 -69.3 -13.4 20.0 0.138 0.0 HOH
3.942
CG
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:4 A:4 19.0 0.131 -63.6 -24.0 19.0 0.131 0.0 HOH
4.251
CD
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:4 A:4 17.0 0.117 -63.9 -24.5 17.0 0.117 0.0 HOH
4.499
CD
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:4 A:4 14.0 0.097 -65.4 -17.3 14.0 0.097 0.0 NA
HOH
7.090
3.587
C
CG
NA
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:4 A:4 15.0 0.103 -59.4 -23.4 15.0 0.103 0.0 HOH
4.858
N
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:4 A:4 20.0 0.138 -61.1 -26.0 20.0 0.138 0.0 HOH
3.727
N
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:4 A:4 18.0 0.124 -61.9 -21.9 18.0 0.124 0.0 HOH
4.364
CD
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 PRO A:4 A:4 21.0 0.145 -63.6 -19.1 21.0 0.145 0.0 HOH
3.662
N
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 PRO A:4 A:4 22.0 0.152 -63.8 -22.9 22.0 0.152 0.0 HOH
3.674
CD
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 PRO A:4 A:4 17.0 0.117 -69.3 -15.9 17.0 0.117 0.0 HOH
3.811
CD
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 PRO A:4 A:4 22.0 0.152 -72.5 -18.7 22.0 0.152 0.0 HOH
2.816
HD2
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 PRO A:4 A:4 21.0 0.145 -71.5 -16.4 21.0 0.145 0.0 HOH
3.020
HD2
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 PRO A:4 A:4 22.0 0.152 -71.8 -18.1 22.0 0.152 0.0 HOH
2.811
HD2
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 PRO A:4 A:4 13.0 0.09 -65.7 -20.3 13.0 0.09 0.0 HOH
4.799
N
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 PRO A:4 A:4 23.0 0.159 -72.6 -20.7 23.0 0.159 0.0 HOH
3.303
HG2
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 PRO A:4 A:4 19.0 0.131 -66.3 -14.8 19.0 0.131 0.0 HOH
6.718
CG
O
PRO B:4 B:4 15.0 0.103 -66.6 -14.6 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 PRO A:4 A:4 22.0 0.152 -73.5 -17.8 22.0 0.152 0.0 HOH
3.483
HG2
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 PRO A:4 A:4 22.0 0.152 -72.9 -18.3 22.0 0.152 0.0 HOH
3.939
HG3
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:4 A:4 17.0 0.117 -62.9 -19.6 17.0 0.117 0.0 PCA
HOH
5.840
4.647
N
CD
O
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:4 A:4 21.0 0.145 -68.7 -18.5 21.0 0.145 0.0 PCA
HOH
6.021
3.844
N
CD
O
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:4 A:4 19.0 0.131 -63.6 -30.6 19.0 0.131 0.0 PCA
HOH
5.832
4.891
N
N
O
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:4 A:4 21.0 0.145 -68.7 -17.1 21.0 0.145 0.0 PCA
HOH
5.925
3.650
N
CD
O
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:4 A:4 18.0 0.124 -56.1 -28.6 18.0 0.124 0.0 HOH
6.684
CG
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:4 A:4 18.0 0.124 -65.3 -22.2 18.0 0.124 0.0 HOH
4.797
N
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:4 A:4 17.0 0.117 -65.0 -21.6 17.0 0.117 0.0 HOH
4.070
CD
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:4 A:4 18.0 0.124 -63.3 -20.6 18.0 0.124 0.0 HOH
4.033
CD
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:4 A:4 20.0 0.138 -63.7 -22.1 20.0 0.138 0.0 HOH
4.786
N
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:4 A:4 21.0 0.145 -62.5 -27.0 21.0 0.145 0.0 HOH
4.867
N
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:4 A:4 16.0 0.11 -66.2 -16.7 16.0 0.11 0.0 NA
HOH
7.476
3.871
C
CG
NA
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:4 A:4 17.0 0.117 -63.2 -26.0 17.0 0.117 0.0 HOH
4.839
N
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:4 A:4 18.0 0.124 -68.7 -20.4 18.0 0.124 0.0 HOH
4.039
CD
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 PRO A:4 A:4 28.0 0.193 -76.3 -18.2 28.0 0.193 0.0 HOH
3.605
CG
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:4 A:4 16.0 0.11 -60.4 -25.1 16.0 0.11 0.0 HOH
4.860
N
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PRO A:4 A:4 20.0 0.138 -65.9 -22.4 20.0 0.138 0.0 HOH
4.800
N
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PRO A:4 A:4 16.0 0.11 -50.7 -30.0 16.0 0.11 0.0 HOH
4.982
CG
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 PRO A:4 A:4 15.0 0.103 -64.9 -17.7 15.0 0.103 0.0 HOH
4.844
N
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 PRO A:4 A:4 18.0 0.124 -63.1 -22.1 18.0 0.124 0.0 HOH
3.917
CD
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 PRO A:4 A:4 15.0 0.103 -65.5 -19.5 15.0 0.103 0.0 HOH
4.992
N
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 PRO A:4 A:4 15.0 0.103 -61.7 -24.5 15.0 0.103 0.0 HOH
4.878
N
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 SER A:4 A:4 19.0 0.165 -62.9 -30.3 19.0 0.165 0.0 HOH
2.695
OG
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 SER A:4 A:4 19.0 0.165 -66.4 -25.8 19.0 0.165 0.0 HOH
3.095
OG
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 SER A:4 A:4 18.0 0.157 -66.6 -30.6 18.0 0.157 0.0 HOH
3.329
OG
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 SER A:4 A:4 19.0 0.165 -68.7 -23.5 19.0 0.165 0.0 HOH
7.656
CB
O
SER B:4 B:4 19.0 0.165 -68.7 -23.5 19.0 0.165 0.0 HOH
7.655
CB
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 SER A:4 X:4 17.0 0.148 -69.2 -24.7 17.0 0.148 0.0 HOH
3.123
OG
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 SER A:4 A:4 20.0 0.174 -68.6 -23.5 20.0 0.174 0.0 HOH
3.021
N
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 SER A:4 X:4 19.0 0.165 -62.6 -29.3 19.0 0.165 0.0 HOH
3.252
OG
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 SER A:4 A:4 20.0 0.174 -63.8 -29.4 20.0 0.174 0.0 HOH
3.278
N
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 SER A:4 A:4 20.0 0.174 -65.4 -22.1 20.0 0.174 0.0 HOH
3.103
N
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 SER A:4 X:4 22.0 0.191 -72.2 -28.5 22.0 0.191 0.0 HOH
2.950
N
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 SER A:4 A:4 19.0 0.165 -63.8 -22.7 19.0 0.165 0.0 HOH
2.815
OG
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 SER A:4 A:4 18.0 0.157 -66.8 -24.4 18.0 0.157 0.0 HOH
3.188
OG
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 SER A:4 A:4 21.0 0.183 -70.4 -24.4 21.0 0.183 0.0 HOH
2.855
OG
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:4 A:4 27.0 0.186 -64.5 -27.7 27.0 0.186 0.0 HOH
3.307
CD
O
PRO B:4 B:4 27.0 0.186 -62.7 -26.7 NA NA NA
PRO C:4 C:4 23.0 0.159 -63.8 -25.6 NA NA NA
PRO D:4 D:4 22.0 0.152 -66.6 -22.7 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:4 A:4 24.0 0.166 -66.4 -26.6 24.0 0.166 0.0 HOH
3.437
CG
O
PRO C:4 C:4 27.0 0.186 -57.7 -23.0 NA NA NA
PRO E:4 E:4 30.0 0.207 -59.5 -33.3 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:4 A:4 24.0 0.166 -64.5 -26.7 24.0 0.166 0.0 HOH
3.410
CD
O
PRO B:4 B:4 25.0 0.172 -63.0 -28.3 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 PRO A:4 A:4 22.0 0.152 -63.3 -21.8 22.0 0.152 0.0 HOH
3.155
C
H2
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 PRO A:4 A:4 26.0 0.179 -68.5 -19.9 26.0 0.179 0.0 HOH
3.521
CD
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 PRO A:4 A:4 22.0 0.152 -59.6 -30.8 22.0 0.152 0.0 HOH
3.675
CD
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 PRO A:4 A:4 22.0 0.152 -69.9 -20.7 22.0 0.152 0.0 HOH
3.127
HD2
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 PRO A:4 A:4 21.0 0.145 -68.2 -20.2 21.0 0.145 0.0 HOH
2.975
HD2
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 PRO A:4 A:4 22.0 0.152 -63.6 -24.0 22.0 0.152 0.0 HOH
3.541
CD
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 PRO A:4 A:4 24.0 0.166 -66.2 -21.6 24.0 0.166 0.0 HOH
3.250
CD
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 PRO A:4 A:4 22.0 0.152 -63.2 -18.7 22.0 0.152 0.0 HOH
3.762
CG
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 PRO A:4 A:4 23.0 0.159 -66.6 -22.4 23.0 0.159 0.0 EDO
HOH
9.680
3.535
N
CD
O1
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 PRO A:4 A:4 25.0 0.172 -62.7 -24.4 25.0 0.172 0.0 EDO
HOH
9.160
3.477
N
CD
O2
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 PRO A:4 P:4 20.0 0.138 -61.5 -18.8 20.0 0.138 0.0 HOH
7.010
CG
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 PRO A:4 A:4 22.0 0.152 -64.8 -21.0 22.0 0.152 0.0 HOH
3.639
N
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 PRO A:4 A:4 22.0 0.152 -58.6 -23.8 22.0 0.152 0.0 HOH
3.834
N
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 PRO A:4 A:4 27.0 0.186 -60.9 -22.9 27.0 0.186 0.0 HOH
6.507
C
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 PRO A:19 A:19 19.0 0.131 -64.2 -16.9
af-p19961-f1 1 P19961 98.83 0.0 PRO A:19 A:19 20.0 0.138 -74.3 -11.0
af-p0dte7-f1 1 P0DTE7 96.87 0.0 SER A:19 A:19 16.0 0.139 -71.7 -16.5
af-p0dte8-f1 1 P0DTE8 96.87 0.0 SER A:19 A:19 17.0 0.148 -71.7 -19.5
af-p0dub6-f1 1 P0DUB6 96.87 0.0 SER A:19 A:19 17.0 0.148 -71.2 -18.9