Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104160166 . G A CCDS783.1:NM_000699.2:c.104cGa>cAa_NP_000690.1:p.35R>Q Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 ARG A:20 A:20 65.0 0.289 -78.0 153.0 65.0 0.289 0.0 HOH
2.927
N
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 ARG A:20 A:20 61.0 0.271 -76.7 154.1 61.0 0.271 0.0 HOH
2.788
N
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 ARG A:20 A:20 62.0 0.276 -79.3 153.1 62.0 0.276 0.0 HOH
2.694
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 ARG A:20 A:20 65.0 0.289 -75.1 149.3 65.0 0.289 0.0 HOH
2.889
N
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 ARG A:20 A:20 68.0 0.302 -81.8 150.1 68.0 0.302 0.0 HOH
2.797
N
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 ARG A:20 A:20 50.0 0.222 -78.0 155.7 50.0 0.222 0.0 HOH
2.814
N
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 ARG A:20 A:20 49.0 0.218 -77.8 154.4 49.0 0.218 0.0 HOH
2.840
N
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:20 A:20 59.0 0.262 -77.5 151.6 59.0 0.262 0.0 HOH
2.695
N
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:20 A:20 68.0 0.302 -84.1 148.5 68.0 0.302 0.0 HOH
2.855
N
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:20 A:20 62.0 0.276 -78.9 151.2 62.0 0.276 0.0 HOH
2.766
N
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:20 A:20 56.0 0.249 -87.5 151.6 56.0 0.249 0.0 HOH
2.868
N
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:20 A:20 63.0 0.28 -79.3 159.6 63.0 0.28 0.0 HOH
2.756
NH2
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:20 A:20 57.0 0.253 -80.3 153.3 57.0 0.253 0.0 HOH
2.845
NH1
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:20 A:20 62.0 0.276 -79.2 149.4 62.0 0.276 0.0 HOH
2.796
N
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:20 A:20 68.0 0.302 -84.9 148.1 68.0 0.302 0.0 HOH
2.839
N
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:20 A:20 60.0 0.267 -80.1 151.8 60.0 0.267 0.0 HOH
2.925
N
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 ARG A:20 A:20 51.0 0.227 -77.5 152.1 51.0 0.227 0.0 HOH
2.880
N
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 ARG A:20 A:20 56.0 0.249 -77.9 149.7 56.0 0.249 0.0 HOH
2.739
NH2
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 ARG A:20 A:20 56.0 0.249 -78.9 150.2 56.0 0.249 0.0 HOH
2.827
N
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 ARG A:20 A:20 43.0 0.191 -72.1 155.4 43.0 0.191 0.0 0XR
0XR
HOH
3.294
7.524
2.863
NH1
NH2
N
O3
C1'
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 ARG A:20 A:20 56.0 0.249 -77.2 150.9 56.0 0.249 0.0 HOH
2.901
NH2
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 ARG A:20 A:20 65.0 0.289 -75.4 147.9 65.0 0.289 0.0 HOH
2.780
N
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 ARG A:20 A:20 64.0 0.284 -74.5 151.1 64.0 0.284 0.0 HOH
2.034
H
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 ARG A:20 A:20 67.0 0.298 -74.0 149.2 67.0 0.298 0.0 HOH
2.016
H
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 ARG A:20 A:20 58.0 0.258 -75.3 152.2 58.0 0.258 0.0 HOH
1.799
HH22
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 ARG A:20 A:20 61.0 0.271 -75.4 150.5 61.0 0.271 0.0 HOH
2.806
NE
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 ARG A:20 A:20 59.0 0.262 -75.3 150.3 59.0 0.262 0.0 HOH
1.758
HH22
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 ARG A:20 A:20 61.0 0.271 -77.1 151.1 61.0 0.271 0.0 HOH
8.143
N
O
ARG B:20 B:20 58.0 0.258 -78.2 153.9 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 ARG A:20 A:20 60.0 0.267 -73.9 150.9 60.0 0.267 0.0 HOH
1.832
HH22
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 ARG A:20 A:20 59.0 0.262 -75.6 150.8 59.0 0.262 0.0 HOH
2.075
H
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:20 A:20 64.0 0.284 -80.4 152.1 64.0 0.284 0.0 HOH
2.811
N
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:20 A:20 65.0 0.289 -79.2 151.8 65.0 0.289 0.0 HOH
2.819
NE
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:20 A:20 59.0 0.262 -81.8 152.9 59.0 0.262 0.0 HOH
2.680
N
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:20 A:20 64.0 0.284 -79.0 151.5 64.0 0.284 0.0 HOH
2.824
NE
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 ARG A:20 A:20 55.0 0.244 -82.7 145.6 55.0 0.244 0.0 HOH
2.724
NE
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:20 A:20 71.0 0.316 -79.5 152.5 71.0 0.316 0.0 HOH
2.829
N
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:20 A:20 63.0 0.28 -81.0 151.1 63.0 0.28 0.0 HOH
2.680
N
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:20 A:20 64.0 0.284 -80.2 150.3 64.0 0.284 0.0 HOH
2.877
N
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:20 A:20 65.0 0.289 -86.6 148.0 65.0 0.289 0.0 HOH
2.984
N
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 ARG A:20 A:20 58.0 0.258 -81.9 153.8 58.0 0.258 0.0 HOH
2.900
N
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 ARG A:20 A:20 65.0 0.289 -80.0 151.7 65.0 0.289 0.0 HOH
2.738
NH1
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 ARG A:20 A:20 60.0 0.267 -82.7 156.3 60.0 0.267 0.0 HOH
3.044
N
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 ARG A:20 A:20 62.0 0.276 -78.6 150.3 62.0 0.276 0.0 HOH
2.681
CG
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 ARG A:20 A:20 72.0 0.32 -73.9 147.1 72.0 0.32 0.0 HOH
2.030
H
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 ARG A:20 A:20 70.0 0.311 -80.9 148.8 70.0 0.311 0.0 HOH
2.844
NE
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ARG A:20 A:20 59.0 0.262 -76.7 154.0 59.0 0.262 0.0 HOH
2.674
N
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ARG A:20 A:20 51.0 0.227 -82.5 152.2 51.0 0.227 0.0 HOH
2.992
NE
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 ARG A:20 A:20 67.0 0.298 -81.0 153.2 67.0 0.298 0.0 GLC
GLC
GLC
HOH
3.543
4.844
8.031
2.652
NH2
NH2
NH2
N
O2
O6
O6
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 ARG A:20 A:20 60.0 0.267 -77.3 158.2 60.0 0.267 0.0 HOH
2.778
N
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 ARG A:20 A:20 62.0 0.276 -81.2 147.0 62.0 0.276 0.0 HOH
2.777
NE
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 ARG A:20 A:20 67.0 0.298 -80.8 150.9 67.0 0.298 0.0 HOH
2.871
N
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 ARG A:20 A:20 57.0 0.253 -86.6 149.0 57.0 0.253 0.0 HOH
2.720
N
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 ARG A:20 A:20 65.0 0.289 -72.2 149.5 65.0 0.289 0.0 HOH
2.875
N
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 ARG A:20 A:20 59.0 0.262 -75.7 150.4 59.0 0.262 0.0 HOH
2.869
N
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 ARG A:20 A:20 58.0 0.258 -95.8 148.0 58.0 0.258 0.0 HOH
2.783
NH1
O
ARG B:20 B:20 57.0 0.253 -95.7 148.0 57.0 0.253 0.0 HOH
2.783
NH1
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 ARG A:20 X:20 61.0 0.271 -73.5 150.4 61.0 0.271 0.0 HOH
2.793
NH2
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 ARG A:20 A:20 50.0 0.222 -73.5 146.3 50.0 0.222 0.0 HOH
2.844
N
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 ARG A:20 X:20 56.0 0.249 -84.7 148.9 56.0 0.249 0.0 HOH
2.772
NH1
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 ARG A:20 A:20 61.0 0.271 -78.4 148.9 61.0 0.271 0.0 HOH
2.767
NH1
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 ARG A:20 A:20 61.0 0.271 -71.7 147.2 61.0 0.271 0.0 HOH
2.875
N
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 ARG A:20 X:20 61.0 0.271 -74.9 150.2 61.0 0.271 0.0 HOH
2.920
N
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 ARG A:20 A:20 56.0 0.249 -74.9 150.5 56.0 0.249 0.0 HOH
2.496
NH2
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 ARG A:20 A:20 64.0 0.284 -72.9 149.0 64.0 0.284 0.0 HOH
2.826
N
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ARG A:20 A:20 55.0 0.244 -71.1 147.4 55.0 0.244 0.0 HOH
2.853
N
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 ARG A:20 A:20 68.0 0.302 -80.8 151.0 68.0 0.302 0.0 HOH
2.777
NE
O
ARG B:20 B:20 60.0 0.267 -79.0 148.3 NA NA NA
ARG C:20 C:20 67.0 0.298 -78.5 149.0 NA NA NA
ARG D:20 D:20 67.0 0.298 -81.7 150.5 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 ARG A:20 A:20 71.0 0.316 -85.0 155.1 71.0 0.316 0.0 HOH
2.492
NE
O
ARG C:20 C:20 61.0 0.271 -79.0 154.8 NA NA NA
ARG E:20 E:20 71.0 0.316 -80.5 156.0 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 ARG A:20 A:20 66.0 0.293 -80.5 155.2 66.0 0.293 0.0 HOH
2.469
CZ
O
ARG B:20 B:20 63.0 0.28 -79.0 152.1 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 ARG A:20 A:20 57.0 0.253 -82.3 152.0 57.0 0.253 0.0 HOH
1.513
H
H1
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 ARG A:20 A:20 63.0 0.28 -71.5 154.7 63.0 0.28 0.0 HOH
2.923
N
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 ARG A:20 A:20 65.0 0.289 -75.5 156.3 65.0 0.289 0.0 HOH
3.205
NE
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 ARG A:20 A:20 60.0 0.267 -78.2 152.4 60.0 0.267 0.0 HOH
2.132
H
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 ARG A:20 A:20 61.0 0.271 -74.5 149.2 61.0 0.271 0.0 HOH
1.884
HH22
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 ARG A:20 A:20 65.0 0.289 -73.2 150.2 65.0 0.289 0.0 HOH
2.915
N
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 ARG A:20 A:20 62.0 0.276 -80.0 150.6 62.0 0.276 0.0 HOH
2.934
N
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 ARG A:20 A:20 67.0 0.298 -84.4 149.4 67.0 0.298 0.0 HOH
2.946
N
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 ARG A:20 A:20 65.0 0.289 -75.9 149.9 65.0 0.289 0.0 EDO
HOH
3.163
2.908
NH1
NH1
O2
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 ARG A:20 A:20 60.0 0.267 -78.7 150.2 60.0 0.267 0.0 HOH
2.775
NH1
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 ARG A:20 P:20 68.0 0.302 -76.8 147.4 68.0 0.302 0.0 HOH
2.949
N
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 ARG A:20 A:20 64.0 0.284 -88.4 151.7 64.0 0.284 0.0 HOH
2.936
N
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 ARG A:20 A:20 62.0 0.276 -85.9 153.3 62.0 0.276 0.0 HOH
2.868
N
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 ARG A:20 A:20 61.0 0.271 -76.4 150.3 61.0 0.271 0.0 HOH
2.622
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 ARG A:35 A:35 47.0 0.209 -78.8 152.8
af-p19961-f1 1 P19961 98.83 0.0 ARG A:35 A:35 47.0 0.209 -76.4 151.3
af-p0dte7-f1 1 P0DTE7 96.87 0.0 ARG A:35 A:35 50.0 0.222 -75.7 151.9
af-p0dte8-f1 1 P0DTE8 96.87 0.0 ARG A:35 A:35 46.0 0.204 -74.0 152.9
af-p0dub6-f1 1 P0DUB6 96.87 0.0 ARG A:35 A:35 53.0 0.236 -76.4 153.1