Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104160207 . C A CCDS783.1:NM_000699.2:c.145Ccg>Acg_NP_000690.1:p.49P>T Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 PRO A:34 A:34 82.0 0.566 T -61.1 -26.5 82.0 0.566 0.0 HOH
7.748
CG
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 PRO A:34 A:34 86.0 0.593 T -56.7 -36.1 86.0 0.593 0.0 HOH
4.628
CD
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 PRO A:34 A:34 87.0 0.6 T -64.3 -24.1 87.0 0.6 0.0 HOH
4.922
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 PRO A:34 A:34 84.0 0.579 T -60.1 -29.9 84.0 0.579 0.0 HOH
3.772
CB
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:34 A:34 83.0 0.572 T -57.9 -37.4 83.0 0.572 0.0 HOH
4.081
CG
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:34 A:34 86.0 0.593 T -60.9 -28.4 86.0 0.593 0.0 HOH
3.817
CA
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:34 A:34 89.0 0.614 T -59.0 -40.0 89.0 0.614 0.0 HOH
2.726
O
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:34 A:34 82.0 0.566 T -55.0 -32.2 82.0 0.566 0.0 HOH
5.942
O
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:34 A:34 86.0 0.593 T -59.7 -35.0 86.0 0.593 0.0 HOH
5.591
N
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:34 A:34 86.0 0.593 T -67.1 -22.3 86.0 0.593 0.0 HOH
6.227
O
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:34 A:34 86.0 0.593 T -55.1 -36.3 86.0 0.593 0.0 HOH
6.173
O
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:34 A:34 85.0 0.586 T -58.8 -25.1 85.0 0.586 0.0 HOH
5.103
N
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:34 A:34 80.0 0.552 H -63.5 -26.9 80.0 0.552 0.0 HOH
4.654
CD
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:34 A:34 80.0 0.552 T -54.2 -40.0 80.0 0.552 0.0 HOH
3.965
CB
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:34 A:34 79.0 0.545 H -51.7 -42.5 79.0 0.545 0.0 HOH
4.142
CG
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:34 A:34 88.0 0.607 T -62.4 -25.1 88.0 0.607 0.0 HOH
2.666
O
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:34 A:34 86.0 0.593 T -60.0 -33.2 86.0 0.593 0.0 HOH
4.684
CD
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:34 A:34 81.0 0.559 T -60.9 -29.2 81.0 0.559 0.0 HOH
3.114
O
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:34 A:34 81.0 0.559 T -59.3 -30.8 81.0 0.559 0.0 HOH
3.568
O
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 PRO A:34 A:34 82.0 0.566 T -61.7 -25.9 82.0 0.566 0.0 HOH
3.507
O
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 PRO A:34 A:34 91.0 0.628 T -59.7 -30.3 91.0 0.628 0.0 HOH
2.594
O
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 PRO A:34 A:34 92.0 0.634 T -66.5 -24.5 92.0 0.634 0.0 HOH
3.251
O
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 PRO A:34 A:34 88.0 0.607 T -64.2 -26.0 88.0 0.607 0.0 HOH
2.636
O
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 PRO A:34 A:34 88.0 0.607 T -65.8 -24.9 88.0 0.607 0.0 HOH
2.875
O
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 PRO A:34 A:34 88.0 0.607 T -63.5 -26.8 88.0 0.607 0.0 HOH
2.637
O
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 PRO A:34 A:34 88.0 0.607 T -59.6 -30.6 88.0 0.607 0.0 HOH
4.205
CD
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 PRO A:34 A:34 90.0 0.621 T -63.9 -28.1 90.0 0.621 0.0 HOH
2.683
O
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 PRO A:34 A:34 88.0 0.607 T -62.2 -30.8 88.0 0.607 0.0 HOH
9.257
C
O
PRO B:34 B:34 88.0 0.607 T -62.7 -30.6 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 PRO A:34 A:34 90.0 0.621 T -65.0 -27.9 90.0 0.621 0.0 HOH
2.644
O
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 PRO A:34 A:34 89.0 0.614 T -64.1 -27.7 89.0 0.614 0.0 HOH
2.638
O
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:34 A:34 88.0 0.607 T -64.8 -28.9 88.0 0.607 0.0 HOH
3.289
N
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:34 A:34 87.0 0.6 T -62.2 -26.0 87.0 0.6 0.0 HOH
2.657
O
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:34 A:34 86.0 0.593 T -66.6 -21.9 86.0 0.593 0.0 HOH
4.562
CD
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:34 A:34 86.0 0.593 T -65.6 -25.0 86.0 0.593 0.0 HOH
2.911
O
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:34 A:34 87.0 0.6 T -64.7 -33.1 87.0 0.6 0.0 HOH
8.209
CG
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:34 A:34 87.0 0.6 T -56.9 -34.9 87.0 0.6 0.0 HOH
4.039
CG
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:34 A:34 84.0 0.579 T -59.9 -34.9 84.0 0.579 0.0 HOH
4.025
CA
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:34 A:34 80.0 0.552 H -59.5 -30.0 80.0 0.552 0.0 HOH
3.867
CB
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:34 A:34 79.0 0.545 T -58.6 -29.0 79.0 0.545 0.0 HOH
3.054
O
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:34 A:34 83.0 0.572 T -55.7 -36.3 83.0 0.572 0.0 HOH
3.782
CA
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:34 A:34 89.0 0.614 T -62.1 -25.0 89.0 0.614 0.0 HOH
2.583
O
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:34 A:34 81.0 0.559 H -55.8 -37.2 81.0 0.559 0.0 HOH
4.801
CG
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:34 A:34 86.0 0.593 T -60.6 -31.0 86.0 0.593 0.0 HOH
4.972
CG
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 PRO A:34 A:34 82.0 0.566 T -64.6 -22.8 82.0 0.566 0.0 HOH
2.745
HB2
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:34 A:34 81.0 0.559 T -67.5 -22.3 81.0 0.559 0.0 HOH
3.607
O
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PRO A:34 A:34 88.0 0.607 T -61.3 -29.9 88.0 0.607 0.0 HOH
4.176
CD
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PRO A:34 A:34 87.0 0.6 T -66.2 -25.1 87.0 0.6 0.0 HOH
3.916
CD
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 PRO A:34 A:34 86.0 0.593 T -64.9 -26.8 86.0 0.593 0.0 HOH
5.679
N
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 PRO A:34 A:34 85.0 0.586 T -61.5 -30.5 85.0 0.586 0.0 HOH
3.489
CB
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 PRO A:34 A:34 82.0 0.566 T -63.1 -26.0 82.0 0.566 0.0 HOH
7.650
CG
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 PRO A:34 A:34 86.0 0.593 T -63.5 -20.0 86.0 0.593 0.0 HOH
5.418
N
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 PRO A:34 A:34 89.0 0.614 T -64.7 -16.1 89.0 0.614 0.0 HOH
5.401
N
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 PRO A:34 A:34 86.0 0.593 T -58.0 -28.5 86.0 0.593 0.0 HOH
3.760
CB
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 PRO A:34 A:34 85.0 0.586 T -66.6 -23.7 85.0 0.586 0.0 HOH
7.252
CG
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 PRO A:34 A:34 81.0 0.559 T -62.5 -24.8 81.0 0.559 0.0 HOH
3.124
O
O
PRO B:34 B:34 80.0 0.552 T -62.5 -24.7 80.0 0.552 0.0 HOH
3.123
O
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 PRO A:34 X:34 85.0 0.586 T -62.9 -24.4 85.0 0.586 0.0 HOH
3.702
CB
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 PRO A:34 A:34 86.0 0.593 T -65.1 -29.8 86.0 0.593 0.0 HOH
3.944
CB
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 PRO A:34 X:34 88.0 0.607 T -63.6 -22.8 88.0 0.607 0.0 HOH
3.559
CB
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 PRO A:34 A:34 85.0 0.586 T -62.6 -26.5 85.0 0.586 0.0 HOH
4.029
CG
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 PRO A:34 A:34 87.0 0.6 T -65.3 -20.5 87.0 0.6 0.0 HOH
5.734
O
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 PRO A:34 X:34 84.0 0.579 T -62.2 -25.7 84.0 0.579 0.0 HOH
3.715
CB
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 PRO A:34 A:34 85.0 0.586 T -62.5 -28.6 85.0 0.586 0.0 HOH
2.875
O
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 PRO A:34 A:34 86.0 0.593 T -65.5 -26.1 86.0 0.593 0.0 HOH
5.289
O
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 PRO A:34 A:34 83.0 0.572 T -63.2 -24.4 83.0 0.572 0.0 HOH
3.753
CB
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:34 A:34 73.0 0.503 T -58.0 -35.1 73.0 0.503 0.0 HOH
2.903
O
O
PRO B:34 B:34 76.0 0.524 T -55.1 -36.5 NA NA NA
PRO C:34 C:34 75.0 0.517 T -55.1 -35.2 NA NA NA
PRO D:34 D:34 74.0 0.51 T -58.8 -33.7 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:34 A:34 77.0 0.531 T -54.1 -31.6 77.0 0.531 0.0 HOH
3.400
O
O
PRO C:34 C:34 74.0 0.51 T -57.7 -36.4 NA NA NA
PRO E:34 E:34 73.0 0.503 T -55.3 -33.6 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:34 A:34 76.0 0.524 T -59.7 -32.2 76.0 0.524 0.0 HOH
3.032
O
O
PRO B:34 B:34 76.0 0.524 T -59.8 -30.1 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 PRO A:34 A:34 82.0 0.566 T -56.7 -38.3 82.0 0.566 0.0 HOH
3.870
CG
H1
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 PRO A:34 A:34 77.0 0.531 T -47.9 -41.9 77.0 0.531 0.0 HOH
3.544
CA
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 PRO A:34 A:34 84.0 0.579 T -57.7 -32.8 84.0 0.579 0.0 HOH
5.298
CB
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 PRO A:34 A:34 79.0 0.545 T -63.7 -27.1 79.0 0.545 0.0 HOH
2.716
HD3
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 PRO A:34 A:34 78.0 0.538 T -53.4 -34.5 78.0 0.538 0.0 HOH
2.540
O
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 PRO A:34 A:34 76.0 0.524 T -56.5 -33.2 76.0 0.524 0.0 EDO
HOH
7.437
3.230
CG
O
C2
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 PRO A:34 A:34 77.0 0.531 T -61.6 -32.8 77.0 0.531 0.0 HOH
3.474
CG
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 PRO A:34 A:34 79.0 0.545 T -55.8 -33.0 79.0 0.545 0.0 HOH
3.553
N
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 PRO A:34 A:34 78.0 0.538 T -57.2 -33.3 78.0 0.538 0.0 EDO
HOH
7.510
2.618
CG
O
C2
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 PRO A:34 A:34 77.0 0.531 T -55.1 -35.3 77.0 0.531 0.0 EDO
HOH
7.614
3.153
CG
O
C2
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 PRO A:34 P:34 89.0 0.614 T -54.7 -38.2 89.0 0.614 0.0 HOH
4.094
O
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 PRO A:34 A:34 77.0 0.531 T -60.2 -38.4 77.0 0.531 0.0 HOH
3.401
N
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 PRO A:34 A:34 77.0 0.531 T -57.0 -37.4 77.0 0.531 0.0 HOH
3.954
CG
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 PRO A:34 A:34 75.0 0.517 T -57.8 -33.4 75.0 0.517 0.0 HOH
3.478
CB
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 PRO A:49 A:49 87.0 0.6 T -57.7 -28.6
af-p19961-f1 1 P19961 98.83 0.0 PRO A:49 A:49 90.0 0.621 T -58.8 -30.5
af-p0dte7-f1 1 P0DTE7 96.87 0.0 PRO A:49 A:49 88.0 0.607 T -68.8 -21.1
af-p0dte8-f1 1 P0DTE8 96.87 0.0 PRO A:49 A:49 91.0 0.628 T -62.2 -28.2
af-p0dub6-f1 1 P0DUB6 96.87 0.0 PRO A:49 A:49 90.0 0.621 T -62.0 -27.5