Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104160600 . G A CCDS783.1:NM_000699.2:c.193Gca>Aca_NP_000690.1:p.65A>T Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 ALA A:50 A:50 6.0 0.052 -87.8 109.9 6.0 0.052 0.0 HOH
3.530
O
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 ALA A:50 A:50 7.0 0.061 -90.5 113.6 7.0 0.061 0.0 HOH
4.202
O
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 ALA A:50 A:50 7.0 0.061 -93.6 104.8 7.0 0.061 0.0 GLC
HOH
9.947
4.771
N
O
O6
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 ALA A:50 A:50 6.0 0.052 -90.8 113.8 6.0 0.052 0.0 HOH
2.955
O
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 ALA A:50 A:50 8.0 0.07 -93.0 106.9 8.0 0.07 0.0 HOH
4.533
O
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 ALA A:50 A:50 7.0 0.061 -93.5 97.3 7.0 0.061 0.0 LAG
HOH
9.819
5.710
N
CB
OB6
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 ALA A:50 A:50 6.0 0.052 -90.5 108.6 6.0 0.052 0.0 LM2
HOH
9.724
2.991
N
O
OB6
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 ALA A:50 A:50 8.0 0.07 -89.4 110.9 8.0 0.07 0.0 HOH
5.267
CB
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 ALA A:50 A:50 6.0 0.052 -92.2 110.1 6.0 0.052 0.0 HOH
5.101
CB
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 ALA A:50 A:50 7.0 0.061 -94.0 108.0 7.0 0.061 0.0 ARE
HOH
9.945
4.991
N
CB
O6B
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 ALA A:50 A:50 4.0 0.035 -90.3 106.3 4.0 0.035 0.0 HOH
6.731
CA
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 ALA A:50 A:50 6.0 0.052 -87.9 102.4 6.0 0.052 0.0 HOH
4.824
CB
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 ALA A:50 A:50 7.0 0.061 -87.6 105.5 7.0 0.061 0.0 QV4
HOH
8.400
3.106
C
O
O6P
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 ALA A:50 A:50 8.0 0.07 -90.6 110.2 8.0 0.07 0.0 HOH
2.713
O
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 ALA A:50 A:50 9.0 0.078 -93.4 109.4 9.0 0.078 0.0 HOH
6.607
CA
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 ALA A:50 A:50 6.0 0.052 -88.4 107.3 6.0 0.052 0.0 HOH
4.042
O
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 ALA A:50 A:50 5.0 0.043 -91.5 108.1 5.0 0.043 0.0 BGC
HOH
9.640
3.067
N
O
O6
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 ALA A:50 A:50 5.0 0.043 -89.5 105.5 5.0 0.043 0.0 HOH
3.073
O
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 ALA A:50 A:50 6.0 0.052 -88.5 110.3 6.0 0.052 0.0 HOH
3.024
O
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 ALA A:50 A:50 9.0 0.078 E -124.4 108.6 9.0 0.078 0.0 HOH
4.058
O
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 ALA A:50 A:50 5.0 0.043 -87.9 108.7 5.0 0.043 0.0 HOH
2.867
O
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 ALA A:50 A:50 6.0 0.052 -88.0 110.9 6.0 0.052 0.0 HOH
2.860
O
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 ALA A:50 A:50 7.0 0.061 -88.5 112.5 7.0 0.061 0.0 HOH
2.872
O
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 ALA A:50 A:50 7.0 0.061 -83.4 107.9 7.0 0.061 0.0 HOH
2.926
O
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 ALA A:50 A:50 6.0 0.052 -87.6 112.4 6.0 0.052 0.0 5QP
HOH
9.947
2.845
HA
O
HO6
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 ALA A:50 A:50 5.0 0.043 -86.4 109.4 5.0 0.043 0.0 HOH
3.082
O
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 ALA A:50 A:50 7.0 0.061 -88.4 111.9 7.0 0.061 0.0 HOH
2.869
O
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 ALA A:50 A:50 6.0 0.052 -86.8 107.8 6.0 0.052 0.0 HOH
6.695
CA
O
ALA B:50 B:50 4.0 0.035 -86.7 107.1 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 ALA A:50 A:50 6.0 0.052 -89.2 112.3 6.0 0.052 0.0 MPD
HOH
8.922
2.836
O
O
H53
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 ALA A:50 A:50 6.0 0.052 -87.3 111.6 6.0 0.052 0.0 HOH
2.869
O
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 ALA A:50 A:50 6.0 0.052 -91.1 110.9 6.0 0.052 0.0 GLC
HOH
9.804
2.863
N
O
O6
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 ALA A:50 A:50 7.0 0.061 -92.5 109.2 7.0 0.061 0.0 GLC
HOH
9.850
2.953
N
O
O6
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 ALA A:50 A:50 7.0 0.061 -94.4 110.6 7.0 0.061 0.0 GLC
HOH
9.844
2.906
N
O
O6
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 ALA A:50 A:50 7.0 0.061 -91.9 108.1 7.0 0.061 0.0 GLC
HOH
9.819
3.013
N
O
O6
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 ALA A:50 A:50 6.0 0.052 -88.1 103.1 6.0 0.052 0.0 HOH
3.779
O
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 ALA A:50 A:50 6.0 0.052 -94.0 107.5 6.0 0.052 0.0 HOH
3.092
O
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 ALA A:50 A:50 8.0 0.07 -90.6 107.5 8.0 0.07 0.0 HOH
2.811
O
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 ALA A:50 A:50 6.0 0.052 -93.2 101.6 6.0 0.052 0.0 HOH
2.960
O
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 ALA A:50 A:50 5.0 0.043 -93.8 111.8 5.0 0.043 0.0 HOH
2.808
O
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 ALA A:50 A:50 8.0 0.07 -92.1 106.8 8.0 0.07 0.0 HOH
4.796
CB
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 ALA A:50 A:50 8.0 0.07 -88.7 109.9 8.0 0.07 0.0 HOH
2.848
O
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 ALA A:50 A:50 5.0 0.043 -91.3 100.3 5.0 0.043 0.0 HOH
4.759
CB
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 ALA A:50 A:50 6.0 0.052 -92.0 109.1 6.0 0.052 0.0 HOH
5.025
CB
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 ALA A:50 A:50 7.0 0.061 -86.6 106.7 7.0 0.061 0.0 GLC
HOH
9.757
2.954
N
O
HO6
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 ALA A:50 A:50 8.0 0.07 -89.5 111.0 8.0 0.07 0.0 HOH
2.926
O
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ALA A:50 A:50 5.0 0.043 -88.7 109.4 5.0 0.043 0.0 HOH
4.561
O
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ALA A:50 A:50 8.0 0.07 -90.0 102.9 8.0 0.07 0.0 HOH
4.515
O
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 ALA A:50 A:50 5.0 0.043 -79.3 103.0 5.0 0.043 0.0 GLC
HOH
9.652
6.043
CB
O
C6
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 ALA A:50 A:50 7.0 0.061 -87.1 105.5 7.0 0.061 0.0 HOH
3.082
O
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 ALA A:50 A:50 7.0 0.061 -87.8 110.1 7.0 0.061 0.0 HOH
2.907
O
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 ALA A:50 A:50 6.0 0.052 -92.2 108.2 6.0 0.052 0.0 HOH
2.839
O
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 ALA A:50 A:50 8.0 0.07 -93.9 104.6 8.0 0.07 0.0 HOH
2.840
O
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 ALA A:50 A:50 10.0 0.087 -81.3 108.4 10.0 0.087 0.0 HOH
2.774
O
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 ALA A:50 A:50 8.0 0.07 -96.6 102.3 8.0 0.07 0.0 HOH
5.891
CB
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 ALA A:50 A:50 10.0 0.087 -110.5 105.5 10.0 0.087 0.0 HOH
5.318
O
O
ALA B:50 B:50 9.0 0.078 -110.5 105.4 9.0 0.078 0.0 HOH
5.319
O
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 ALA A:50 X:50 9.0 0.078 -86.3 107.8 9.0 0.078 0.0 HOH
2.952
O
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 ALA A:50 A:50 9.0 0.078 -86.8 106.6 9.0 0.078 0.0 HOH
3.044
O
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 ALA A:50 X:50 9.0 0.078 -87.7 109.3 9.0 0.078 0.0 HOH
2.920
O
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 ALA A:50 A:50 8.0 0.07 -83.9 105.4 8.0 0.07 0.0 HOH
2.892
O
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 ALA A:50 A:50 11.0 0.096 -87.1 107.0 11.0 0.096 0.0 HOH
2.996
O
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 ALA A:50 X:50 9.0 0.078 -85.3 110.5 9.0 0.078 0.0 HOH
2.907
O
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 ALA A:50 A:50 8.0 0.07 -87.4 114.3 8.0 0.07 0.0 HOH
2.835
O
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 ALA A:50 A:50 9.0 0.078 -82.8 110.2 9.0 0.078 0.0 HOH
3.069
O
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ALA A:50 A:50 9.0 0.078 -85.5 109.1 9.0 0.078 0.0 HOH
2.975
O
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 VAL A:50 A:50 42.0 0.271 -89.2 122.2 42.0 0.271 0.0 HOH
2.741
O
O
VAL B:50 B:50 37.0 0.239 -89.3 119.7 NA NA NA
VAL C:50 C:50 39.0 0.252 -87.1 121.1 NA NA NA
VAL D:50 D:50 40.0 0.258 -86.6 121.9 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 VAL A:50 A:50 36.0 0.232 -91.7 126.2 36.0 0.232 0.0 HOH
3.664
O
O
VAL C:50 C:50 43.0 0.277 -79.6 137.4 NA NA NA
VAL E:50 E:50 40.0 0.258 -97.5 117.5 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 VAL A:50 A:50 39.0 0.252 -92.9 122.2 39.0 0.252 0.0 HOH
3.849
O
O
VAL B:50 B:50 46.0 0.297 -88.8 126.5 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 VAL A:50 A:50 41.0 0.265 -91.7 125.7 41.0 0.265 0.0 HOH
1.857
O
H1
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 VAL A:50 A:50 43.0 0.277 -89.2 119.0 43.0 0.277 0.0 GLC
HOH
9.773
3.319
C
CG2
O6
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 VAL A:50 A:50 40.0 0.258 -94.8 115.3 40.0 0.258 0.0 HOH
4.454
CG2
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 VAL A:50 A:50 40.0 0.258 -89.4 125.2 40.0 0.258 0.0 GLC
GLC
GLC
GLC
GLC
GLC
HOH
6.532
7.517
8.764
9.799
9.073
7.057
2.877
O
O
HG13
HA
O
O
HG22
O3
O2
HO2
HO6
O6
H1
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 VAL A:50 A:50 40.0 0.258 -91.6 123.8 40.0 0.258 0.0 GLC
GLC
GLC
GLC
GLC
GLC
HOH
7.289
9.698
9.583
6.976
5.446
9.531
3.009
O
HG13
O
O
O
O
HG22
O2
HO2
HO3
HO3
HO3
HO6
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 VAL A:50 A:50 37.0 0.239 -80.5 127.6 37.0 0.239 0.0 GLC
GLC
HOH
9.462
9.460
2.926
C
O
O
O6
O6
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 VAL A:50 A:50 39.0 0.252 -91.7 118.2 39.0 0.252 0.0 MA3
MA2
HG
HOH
9.641
9.538
7.634
3.988
C
O
N
O
O6
O6
HG
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 VAL A:50 A:50 39.0 0.252 -89.2 111.4 39.0 0.252 0.0 GLC
HOH
9.795
2.973
C
O
O6
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 VAL A:50 A:50 40.0 0.258 -82.3 128.2 40.0 0.258 0.0 GLC
EDO
HOH
9.448
3.699
2.480
C
O
O
O6
O2
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 VAL A:50 A:50 39.0 0.252 -82.3 132.7 39.0 0.252 0.0 GLC
GLC
EDO
EDO
HOH
9.476
9.315
5.153
4.305
2.579
C
O
O
CG2
O
O6
O6
O2
O1
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 VAL A:50 P:50 26.0 0.168 -88.7 125.2 26.0 0.168 0.0 HOH
3.144
O
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 VAL A:50 A:50 35.0 0.226 -94.2 118.0 35.0 0.226 0.0 HOH
4.227
O
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 VAL A:50 A:50 40.0 0.258 -96.3 121.8 40.0 0.258 0.0 GLC
HOH
9.752
4.665
C
O
O6
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 VAL A:50 A:50 36.0 0.232 -80.1 126.8 36.0 0.232 0.0 HOH
3.366
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 ALA A:65 A:65 7.0 0.061 -92.1 109.8
af-p19961-f1 1 P19961 98.83 0.0 ALA A:65 A:65 10.0 0.087 -91.5 100.3
af-p0dte7-f1 1 P0DTE7 96.87 0.0 ALA A:65 A:65 10.0 0.087 -90.0 100.6
af-p0dte8-f1 1 P0DTE8 96.87 0.0 ALA A:65 A:65 11.0 0.096 -90.4 101.2
af-p0dub6-f1 1 P0DUB6 96.87 0.0 ALA A:65 A:65 10.0 0.087 -88.4 107.4