Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104161536 . C A CCDS783.1:NM_000699.2:c.319Cgt>Agt_NP_000690.1:p.107R>S Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 ARG A:92 A:92 19.0 0.084 E -79.4 157.4 19.0 0.084 0.0 HOH
3.438
CA
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 ARG A:92 A:92 22.0 0.098 E -82.1 156.8 22.0 0.098 0.0 HOH
2.950
NH1
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 ARG A:92 A:92 17.0 0.076 E -80.2 159.5 17.0 0.076 0.0 HOH
2.942
NH1
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 ARG A:92 A:92 20.0 0.089 E -81.8 155.8 20.0 0.089 0.0 HOH
2.948
NH2
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 ARG A:92 A:92 20.0 0.089 E -79.1 158.6 20.0 0.089 0.0 HOH
2.830
NH1
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 ARG A:92 A:92 20.0 0.089 E -82.1 156.2 20.0 0.089 0.0 HOH
3.338
CA
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 ARG A:92 A:92 21.0 0.093 E -83.8 160.3 21.0 0.093 0.0 HOH
3.490
CA
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:92 A:92 24.0 0.107 E -80.2 155.6 24.0 0.107 0.0 HOH
2.676
NH1
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:92 A:92 24.0 0.107 E -81.7 158.6 24.0 0.107 0.0 HOH
2.788
NH1
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:92 A:92 22.0 0.098 E -83.3 157.0 22.0 0.098 0.0 HOH
2.883
NH1
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 ARG A:92 A:92 20.0 0.089 E -78.9 159.1 20.0 0.089 0.0 HOH
3.475
CA
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:92 A:92 14.0 0.062 E -77.5 159.1 14.0 0.062 0.0 HOH
2.998
CA
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:92 A:92 16.0 0.071 E -80.2 160.4 16.0 0.071 0.0 HOH
3.319
NH2
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:92 A:92 21.0 0.093 E -80.0 157.0 21.0 0.093 0.0 HOH
3.395
NH2
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:92 A:92 21.0 0.093 E -78.1 158.8 21.0 0.093 0.0 HOH
2.860
NH1
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 ARG A:92 A:92 16.0 0.071 E -81.3 161.7 16.0 0.071 0.0 NA
HOH
6.586
3.076
NH2
NH2
NA
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 ARG A:92 A:92 22.0 0.098 E -83.1 160.4 22.0 0.098 0.0 HOH
3.119
NH1
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 ARG A:92 A:92 22.0 0.098 E -83.6 160.5 22.0 0.098 0.0 HOH
3.085
NH2
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 ARG A:92 A:92 20.0 0.089 E -81.5 158.0 20.0 0.089 0.0 HOH
2.981
NH1
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 ARG A:92 A:92 20.0 0.089 E -83.1 163.9 20.0 0.089 0.0 HOH
2.603
NH2
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 ARG A:92 A:92 20.0 0.089 E -84.2 160.9 20.0 0.089 0.0 HOH
2.821
NH2
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 ARG A:92 A:92 21.0 0.093 E -83.1 159.3 21.0 0.093 0.0 HOH
2.923
NH2
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 ARG A:92 A:92 24.0 0.107 E -87.8 161.5 24.0 0.107 0.0 HOH
2.140
HH12
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 ARG A:92 A:92 21.0 0.093 E -86.7 162.2 21.0 0.093 0.0 HOH
2.053
HH12
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 ARG A:92 A:92 20.0 0.089 E -85.8 161.1 20.0 0.089 0.0 HOH
2.007
HH21
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 ARG A:92 A:92 22.0 0.098 E -86.3 164.0 22.0 0.098 0.0 HOH
3.336
CA
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 ARG A:92 A:92 26.0 0.116 E -87.9 162.3 26.0 0.116 0.0 HOH
2.082
HH21
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 ARG A:92 A:92 17.0 0.076 E -85.7 165.8 17.0 0.076 0.0 HOH
3.669
CD
O
ARG B:92 B:92 6.0 0.027 E -86.1 165.6 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 ARG A:92 A:92 26.0 0.116 E -87.8 162.2 26.0 0.116 0.0 HOH
2.053
HH21
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 ARG A:92 A:92 26.0 0.116 E -87.4 161.9 26.0 0.116 0.0 HOH
2.195
HH12
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:92 A:92 23.0 0.102 E -79.6 162.6 23.0 0.102 0.0 HOH
2.951
NH2
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:92 A:92 25.0 0.111 E -82.6 161.0 25.0 0.111 0.0 HOH
2.832
NH2
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:92 A:92 21.0 0.093 E -80.9 157.9 21.0 0.093 0.0 HOH
2.947
NH1
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 ARG A:92 A:92 21.0 0.093 E -84.4 161.1 21.0 0.093 0.0 MPD
HOH
8.136
2.904
NH1
NH1
C1
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 ARG A:92 A:92 17.0 0.076 E -81.1 159.7 17.0 0.076 0.0 HOH
3.298
NH1
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:92 A:92 22.0 0.098 E -78.8 157.0 22.0 0.098 0.0 HOH
2.825
NH1
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:92 A:92 21.0 0.093 E -78.8 158.4 21.0 0.093 0.0 HOH
2.899
NH1
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:92 A:92 22.0 0.098 E -79.1 159.4 22.0 0.098 0.0 HOH
2.890
NH1
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 ARG A:92 A:92 23.0 0.102 E -81.5 161.7 23.0 0.102 0.0 HOH
2.999
NH1
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 ARG A:92 A:92 22.0 0.098 E -77.2 155.4 22.0 0.098 0.0 HOH
2.991
NH2
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 ARG A:92 A:92 17.0 0.076 E -80.7 159.5 17.0 0.076 0.0 NA
HOH
7.540
2.833
NH2
NH1
NA
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 ARG A:92 A:92 18.0 0.08 E -74.8 156.4 18.0 0.08 0.0 HOH
3.019
NH1
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 ARG A:92 A:92 20.0 0.089 E -80.9 161.7 20.0 0.089 0.0 HOH
3.089
NH2
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 ARG A:92 A:92 21.0 0.093 E -89.2 161.4 21.0 0.093 0.0 HOH
1.913
HH21
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 ARG A:92 A:92 24.0 0.107 E -79.8 159.9 24.0 0.107 0.0 HOH
3.366
CA
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ARG A:92 A:92 22.0 0.098 E -82.3 154.9 22.0 0.098 0.0 HOH
2.905
NH1
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ARG A:92 A:92 17.0 0.076 E -83.3 156.8 17.0 0.076 0.0 HOH
3.369
NH1
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 ARG A:92 A:92 21.0 0.093 E -85.1 160.1 21.0 0.093 0.0 HOH
3.724
CA
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 ARG A:92 A:92 20.0 0.089 E -79.0 156.8 20.0 0.089 0.0 HOH
2.806
NH2
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 ARG A:92 A:92 14.0 0.062 E -79.4 158.3 14.0 0.062 0.0 HOH
3.493
CA
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 ARG A:92 A:92 21.0 0.093 E -74.7 158.0 21.0 0.093 0.0 HOH
2.639
NH2
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 ARG A:92 A:92 23.0 0.102 E -83.8 160.3 23.0 0.102 0.0 HOH
3.143
NH2
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 ARG A:92 A:92 22.0 0.098 E -86.5 160.5 22.0 0.098 0.0 HOH
2.908
NH2
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 ARG A:92 A:92 22.0 0.098 E -83.6 159.1 22.0 0.098 0.0 HOH
3.393
CA
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 ARG A:92 A:92 8.0 0.036 E -73.8 153.7 8.0 0.036 0.0 HOH
3.125
NH2
O
ARG B:92 B:92 8.0 0.036 E -73.8 153.8 8.0 0.036 0.0 HOH
3.124
NH2
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 ARG A:92 X:92 21.0 0.093 E -85.7 161.1 21.0 0.093 0.0 HOH
2.851
NH2
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 ARG A:92 A:92 22.0 0.098 E -85.1 159.6 22.0 0.098 0.0 HOH
2.678
NH2
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 ARG A:92 X:92 21.0 0.093 E -87.6 161.8 21.0 0.093 0.0 HOH
3.086
NH1
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 ARG A:92 A:92 21.0 0.093 E -89.6 158.0 21.0 0.093 0.0 HOH
2.838
NH2
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 ARG A:92 A:92 18.0 0.08 E -87.2 163.8 18.0 0.08 0.0 HOH
2.643
NH1
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 ARG A:92 X:92 20.0 0.089 E -87.8 161.3 20.0 0.089 0.0 HOH
2.795
NH1
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 ARG A:92 A:92 24.0 0.107 E -87.0 159.4 24.0 0.107 0.0 HOH
3.055
NH2
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 ARG A:92 A:92 19.0 0.084 E -92.4 159.1 19.0 0.084 0.0 HOH
3.414
CA
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ARG A:92 A:92 19.0 0.084 E -88.3 161.4 19.0 0.084 0.0 HOH
2.921
NH2
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 ARG A:92 A:92 10.0 0.044 E -81.3 164.0 10.0 0.044 0.0 HOH
2.700
NH1
O
ARG B:92 B:92 14.0 0.062 E -81.6 161.9 NA NA NA
ARG C:92 C:92 17.0 0.076 E -78.6 161.6 NA NA NA
ARG D:92 D:92 17.0 0.076 E -77.5 162.3 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 ARG A:92 A:92 15.0 0.067 E -76.6 161.5 15.0 0.067 0.0 HOH
3.122
CA
O
ARG C:92 C:92 11.0 0.049 E -76.4 162.8 NA NA NA
ARG E:92 E:92 14.0 0.062 E -81.8 155.7 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 ARG A:92 A:92 22.0 0.098 E -87.2 162.3 22.0 0.098 0.0 HOH
2.758
NH1
O
ARG B:92 B:92 17.0 0.076 E -80.1 163.5 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 ARG A:92 A:92 14.0 0.062 E -83.5 160.9 14.0 0.062 0.0 HOH
2.745
CA
H2
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 ARG A:92 A:92 20.0 0.089 E -87.5 159.1 20.0 0.089 0.0 HOH
3.365
CA
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 ARG A:92 A:92 15.0 0.067 E -79.9 161.2 15.0 0.067 0.0 HOH
8.175
NE
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 ARG A:92 A:92 18.0 0.08 E -80.2 161.2 18.0 0.08 0.0 HOH
1.910
HH22
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 ARG A:92 A:92 17.0 0.076 E -83.7 157.5 17.0 0.076 0.0 HOH
1.853
HH12
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 ARG A:92 A:92 14.0 0.062 E -86.4 160.8 14.0 0.062 0.0 HOH
2.706
NH2
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 ARG A:92 A:92 16.0 0.071 E -80.5 161.7 16.0 0.071 0.0 HOH
3.054
NH2
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 ARG A:92 A:92 14.0 0.062 E -82.4 162.1 14.0 0.062 0.0 HOH
3.063
NH1
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 ARG A:92 A:92 18.0 0.08 E -85.7 161.2 18.0 0.08 0.0 HOH
3.372
CA
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 ARG A:92 A:92 11.0 0.049 E -82.4 161.0 11.0 0.049 0.0 HOH
2.783
NH2
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 ARG A:92 P:92 19.0 0.084 E -85.6 163.1 19.0 0.084 0.0 HOH
3.444
CA
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 ARG A:92 A:92 18.0 0.08 E -75.3 161.7 18.0 0.08 0.0 HOH
2.885
NH2
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 ARG A:92 A:92 18.0 0.08 E -78.0 155.7 18.0 0.08 0.0 HOH
3.536
CA
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 ARG A:92 A:92 20.0 0.089 E -84.7 161.5 20.0 0.089 0.0 HOH
3.313
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 ARG A:107 A:107 26.0 0.116 E -81.1 153.7
af-p19961-f1 1 P19961 98.83 0.0 ARG A:107 A:107 22.0 0.098 E -84.2 156.2
af-p0dte7-f1 1 P0DTE7 96.87 0.0 ARG A:107 A:107 21.0 0.093 E -83.7 155.7
af-p0dte8-f1 1 P0DTE8 96.87 0.0 ARG A:107 A:107 22.0 0.098 E -83.6 155.0
af-p0dub6-f1 1 P0DUB6 96.87 0.0 ARG A:107 A:107 22.0 0.098 E -84.4 156.7