Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104161600 . G A CCDS783.1:NM_000699.2:c.383aGt>aAt_NP_000690.1:p.128S>N Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 SER A:113 A:113 12.0 0.104 B -135.2 154.8 12.0 0.104 0.0 HOH
5.534
N
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 SER A:113 A:113 12.0 0.104 B -129.7 165.1 12.0 0.104 0.0 HOH
5.281
N
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 SER A:113 A:113 12.0 0.104 B -128.9 163.5 12.0 0.104 0.0 HOH
3.894
O
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 SER A:113 A:113 12.0 0.104 B -133.1 155.0 12.0 0.104 0.0 HOH
3.578
O
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 SER A:113 A:113 12.0 0.104 B -129.2 161.8 12.0 0.104 0.0 HOH
3.763
O
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 SER A:113 A:113 13.0 0.113 B -130.9 165.7 13.0 0.113 0.0 HOH
5.185
N
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 SER A:113 A:113 13.0 0.113 B -136.8 157.7 13.0 0.113 0.0 HOH
5.107
N
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 SER A:113 A:113 12.0 0.104 B -130.2 160.6 12.0 0.104 0.0 HOH
5.045
O
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 SER A:113 A:113 12.0 0.104 B -125.5 161.8 12.0 0.104 0.0 HOH
5.474
O
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 SER A:113 A:113 13.0 0.113 B -135.6 163.7 13.0 0.113 0.0 HOH
5.407
O
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 SER A:113 A:113 12.0 0.104 B -124.3 154.0 12.0 0.104 0.0 HOH
7.188
OG
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 SER A:113 A:113 12.0 0.104 B -134.8 159.9 12.0 0.104 0.0 HOH
5.015
O
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 SER A:113 A:113 12.0 0.104 B -130.6 160.4 12.0 0.104 0.0 HOH
4.430
O
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 SER A:113 A:113 13.0 0.113 B -123.7 161.2 13.0 0.113 0.0 HOH
3.095
O
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 SER A:113 A:113 13.0 0.113 B -127.8 163.0 13.0 0.113 0.0 HOH
6.260
OG
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 SER A:113 A:113 12.0 0.104 B -132.2 158.6 12.0 0.104 0.0 HOH
4.801
O
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 SER A:113 A:113 13.0 0.113 B -131.5 161.7 13.0 0.113 0.0 HOH
4.901
O
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 SER A:113 A:113 13.0 0.113 B -130.7 162.1 13.0 0.113 0.0 HOH
3.737
O
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 SER A:113 A:113 12.0 0.104 B -130.0 161.2 12.0 0.104 0.0 HOH
4.770
O
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 SER A:113 A:113 12.0 0.104 E -130.7 158.8 12.0 0.104 0.0 HOH
5.709
O
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 SER A:113 A:113 12.0 0.104 B -137.4 158.6 12.0 0.104 0.0 HOH
3.152
O
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 SER A:113 A:113 13.0 0.113 B -158.9 156.7 13.0 0.113 0.0 HOH
4.956
O
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 SER A:113 A:113 13.0 0.113 B -145.8 158.4 13.0 0.113 0.0 HOH
4.590
H
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 SER A:113 A:113 13.0 0.113 B -150.5 156.0 13.0 0.113 0.0 HOH
4.375
H
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 SER A:113 A:113 12.0 0.104 B -145.6 159.0 12.0 0.104 0.0 HOH
4.344
H
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 SER A:113 A:113 13.0 0.113 B -142.7 158.5 13.0 0.113 0.0 HOH
5.286
N
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 SER A:113 A:113 12.0 0.104 B -145.4 158.2 12.0 0.104 0.0 HOH
3.016
H
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 SER A:113 A:113 13.0 0.113 B -135.4 166.2 13.0 0.113 0.0 HOH
5.707
OG
O
SER B:113 B:113 12.0 0.104 B -135.9 166.6 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 SER A:113 A:113 12.0 0.104 B -146.0 158.1 12.0 0.104 0.0 HOH
4.385
H
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 SER A:113 A:113 12.0 0.104 B -147.4 157.9 12.0 0.104 0.0 HOH
4.321
H
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 SER A:113 A:113 12.0 0.104 B -136.4 160.0 12.0 0.104 0.0 HOH
5.207
O
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 SER A:113 A:113 12.0 0.104 B -134.0 160.5 12.0 0.104 0.0 HOH
5.055
O
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 SER A:113 A:113 13.0 0.113 B -133.7 159.1 13.0 0.113 0.0 HOH
4.319
O
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 SER A:113 A:113 12.0 0.104 B -137.8 159.0 12.0 0.104 0.0 HOH
5.203
N
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 SER A:113 A:113 16.0 0.139 B -125.3 159.8 16.0 0.139 0.0 HOH
5.148
O
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 SER A:113 A:113 13.0 0.113 B -129.7 160.8 13.0 0.113 0.0 HOH
3.916
O
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 SER A:113 A:113 12.0 0.104 B -131.2 160.5 12.0 0.104 0.0 HOH
3.378
O
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 SER A:113 A:113 12.0 0.104 B -126.0 164.5 12.0 0.104 0.0 HOH
5.389
N
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 SER A:113 A:113 15.0 0.13 B -127.4 169.6 15.0 0.13 0.0 HOH
4.020
O
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 SER A:113 A:113 13.0 0.113 B -129.0 161.0 13.0 0.113 0.0 HOH
5.205
O
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 SER A:113 A:113 12.0 0.104 B -129.3 158.9 12.0 0.104 0.0 HOH
4.741
O
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 SER A:113 A:113 12.0 0.104 B -131.5 160.3 12.0 0.104 0.0 HOH
5.009
N
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 SER A:113 A:113 13.0 0.113 B -125.1 166.3 13.0 0.113 0.0 HOH
4.417
O
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 SER A:113 A:113 13.0 0.113 B -150.2 156.5 13.0 0.113 0.0 HOH
5.091
H
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 SER A:113 A:113 13.0 0.113 B -133.0 161.0 13.0 0.113 0.0 HOH
4.998
O
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 SER A:113 A:113 12.0 0.104 B -118.9 167.3 12.0 0.104 0.0 HOH
7.049
OG
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 SER A:113 A:113 13.0 0.113 B -135.3 154.8 13.0 0.113 0.0 HOH
6.976
OG
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 SER A:113 A:113 13.0 0.113 B -140.3 159.1 13.0 0.113 0.0 GLC
HOH
8.360
4.992
O
N
C6
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 SER A:113 A:113 12.0 0.104 B -124.1 163.8 12.0 0.104 0.0 HOH
2.971
O
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 SER A:113 A:113 12.0 0.104 B -130.0 159.6 12.0 0.104 0.0 HOH
5.168
O
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 SER A:113 A:113 13.0 0.113 B -130.6 160.3 13.0 0.113 0.0 HOH
5.401
O
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 SER A:113 A:113 13.0 0.113 B -137.0 155.5 13.0 0.113 0.0 HOH
5.089
N
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 SER A:113 A:113 13.0 0.113 B -145.0 157.5 13.0 0.113 0.0 HOH
5.396
N
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 SER A:113 A:113 12.0 0.104 B -128.4 160.4 12.0 0.104 0.0 HOH
6.054
O
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 SER A:113 A:113 12.0 0.104 B -149.1 141.7 12.0 0.104 0.0 HOH
5.319
N
O
SER B:113 B:113 12.0 0.104 B -149.0 141.7 12.0 0.104 0.0 HOH
5.561
C
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 SER A:113 X:113 13.0 0.113 B -147.0 155.3 13.0 0.113 0.0 HOH
4.568
O
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 SER A:113 A:113 11.0 0.096 B -140.6 159.7 11.0 0.096 0.0 HOH
5.255
N
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 SER A:113 X:113 13.0 0.113 B -147.1 153.4 13.0 0.113 0.0 HOH
5.311
O
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 SER A:113 A:113 13.0 0.113 B -145.2 155.9 13.0 0.113 0.0 HOH
5.163
N
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 SER A:113 A:113 13.0 0.113 B -146.1 158.9 13.0 0.113 0.0 HOH
5.247
N
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 SER A:113 X:113 13.0 0.113 B -144.6 158.4 13.0 0.113 0.0 HOH
5.236
N
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 SER A:113 A:113 13.0 0.113 B -143.8 161.2 13.0 0.113 0.0 HOH
5.160
N
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 SER A:113 A:113 13.0 0.113 B -148.7 153.1 13.0 0.113 0.0 HOH
5.461
N
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 SER A:113 A:113 13.0 0.113 B -141.7 160.3 13.0 0.113 0.0 HOH
5.245
N
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 THR A:113 A:113 11.0 0.079 B -134.0 162.5 11.0 0.079 0.0 HOH
2.618
O
O
THR B:113 B:113 11.0 0.079 B -134.8 160.0 NA NA NA
THR C:113 C:113 12.0 0.086 B -135.1 161.5 NA NA NA
THR D:113 D:113 12.0 0.086 B -132.8 161.7 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 THR A:113 A:113 13.0 0.093 B -133.5 158.2 13.0 0.093 0.0 HOH
2.982
O
O
THR C:113 C:113 12.0 0.086 B -132.2 154.7 NA NA NA
THR E:113 E:113 13.0 0.093 B -135.6 160.3 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 THR A:113 A:113 12.0 0.086 B -137.6 159.4 12.0 0.086 0.0 HOH
4.923
N
O
THR B:113 B:113 13.0 0.093 B -139.2 163.0 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 THR A:113 A:113 12.0 0.086 B -129.6 160.5 12.0 0.086 0.0 HOH
4.471
N
H1
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 THR A:113 A:113 12.0 0.086 B -135.7 161.8 12.0 0.086 0.0 HOH
3.629
O
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 THR A:113 A:113 14.0 0.1 B -138.3 159.8 14.0 0.1 0.0 HOH
4.373
O
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 THR A:113 A:113 12.0 0.086 B -139.7 163.2 12.0 0.086 0.0 HOH
3.246
H
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 THR A:113 A:113 12.0 0.086 B -140.4 158.0 12.0 0.086 0.0 GLC
HOH
9.607
2.653
N
O
HO3
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 THR A:113 A:113 13.0 0.093 B -143.6 162.2 13.0 0.093 0.0 HOH
4.521
O
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 THR A:113 A:113 13.0 0.093 B -135.0 160.3 13.0 0.093 0.0 HG
HOH
5.641
4.773
CG2
N
HG
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 THR A:113 A:113 12.0 0.086 B -133.2 160.3 12.0 0.086 0.0 HOH
2.977
O
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 THR A:113 A:113 13.0 0.093 B -140.5 162.7 13.0 0.093 0.0 EDO
HOH
4.319
2.901
CG2
O
O1
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 THR A:113 A:113 13.0 0.093 B -131.9 165.5 13.0 0.093 0.0 EDO
EDO
HOH
9.327
4.202
2.874
CG2
O
O
O2
C1
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 THR A:113 P:113 15.0 0.107 B -130.5 170.3 15.0 0.107 0.0 HOH
4.270
N
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 THR A:113 A:113 13.0 0.093 B -133.0 159.6 13.0 0.093 0.0 HOH
5.013
CG2
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 THR A:113 A:113 13.0 0.093 B -133.6 160.8 13.0 0.093 0.0 HOH
5.036
N
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 THR A:113 A:113 13.0 0.093 B -140.6 162.5 13.0 0.093 0.0 HOH
5.469
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 SER A:128 A:128 13.0 0.113 B -132.8 157.9
af-p19961-f1 1 P19961 98.83 0.0 SER A:128 A:128 12.0 0.104 B -141.0 155.3
af-p0dte7-f1 1 P0DTE7 96.87 0.0 SER A:128 A:128 12.0 0.104 B -139.1 154.7
af-p0dte8-f1 1 P0DTE8 96.87 0.0 SER A:128 A:128 12.0 0.104 B -141.0 155.4
af-p0dub6-f1 1 P0DUB6 96.87 0.0 SER A:128 A:128 12.0 0.104 B -138.4 153.0