Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104162176 . G A CCDS783.1:NM_000699.2:c.514Gtc>Atc_NP_000690.1:p.172V>I Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 VAL A:157 A:157 0.0 0.0 H -54.0 -35.0 0.0 0.0 0.0 BGC
AC1
CA
HOH
6.282
6.489
4.876
2.894
CG1
CG1
O
O
O3
O2
CA
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 VAL A:157 A:157 0.0 0.0 H -61.0 -30.7 0.0 0.0 0.0 CA
HOH
4.755
2.971
O
O
CA
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 VAL A:157 A:157 0.0 0.0 H -60.9 -29.1 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.685
6.609
4.799
2.790
CG1
CG1
O
O
O3
O2
CA
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 VAL A:157 A:157 0.0 0.0 H -52.8 -37.9 0.0 0.0 0.0 CA
HOH
4.649
2.705
O
O
CA
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 VAL A:157 A:157 0.0 0.0 H -62.2 -30.8 0.0 0.0 0.0 CA
GOX
HOH
4.781
7.062
4.258
O
CG1
CG2
CA
O4
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 VAL A:157 A:157 0.0 0.0 H -62.8 -28.7 0.0 0.0 0.0 LAG
CA
GOX
HOH
9.832
4.771
6.357
4.400
CG1
O
CG1
CG2
OA7
CA
O7
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 VAL A:157 A:157 0.0 0.0 H -65.7 -29.0 0.0 0.0 0.0 LM2
CA
HOH
9.337
4.719
4.496
CG1
O
CG2
OA7
CA
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 VAL A:157 A:157 0.0 0.0 H -61.6 -32.1 0.0 0.0 0.0 GLC
AC1
CA
HOH
6.661
6.511
4.769
4.258
CG1
CG1
O
CG2
O3
O2
CA
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 VAL A:157 A:157 0.0 0.0 H -64.1 -32.0 0.0 0.0 0.0 GLC
AC1
CA
HOH
6.545
6.511
4.780
2.924
CG1
CG1
O
O
O3
O2
CA
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 VAL A:157 A:157 0.0 0.0 H -62.8 -31.4 0.0 0.0 0.0 ARE
CA
HOH
6.466
4.793
4.120
CG1
O
CG2
O2C
CA
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 VAL A:157 A:157 0.0 0.0 H -68.5 -30.1 0.0 0.0 0.0 6SA
CA
HOH
6.354
4.604
4.167
CG1
O
CG2
OR3
CA
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -60.6 -34.1 0.0 0.0 0.0 CA
HOH
4.632
2.819
O
O
CA
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -61.2 -33.1 0.0 0.0 0.0 CA
QV4
HOH
4.748
6.609
2.857
O
CG1
O
CA
O2S
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -62.1 -30.8 0.0 0.0 0.0 CA
HOH
4.726
2.937
O
O
CA
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -58.2 -31.6 0.0 0.0 0.0 ARE
CA
HOH
6.399
4.717
2.926
CG1
O
O
O2C
CA
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -61.3 -32.2 0.0 0.0 0.0 CA
AZI
HOH
4.647
7.119
2.709
O
CG1
O
CA
N2
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 VAL A:157 A:157 0.0 0.0 H -62.3 -27.5 0.0 0.0 0.0 CA
HOH
4.787
4.501
O
CG2
CA
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 VAL A:157 A:157 0.0 0.0 H -63.0 -28.2 0.0 0.0 0.0 B0D
CA
HOH
6.398
4.736
4.466
CG1
O
CG2
O2
CA
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 VAL A:157 A:157 0.0 0.0 H -62.3 -25.4 0.0 0.0 0.0 CA
HOH
4.797
4.335
O
CG2
CA
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 VAL A:157 A:157 0.0 0.0 H -60.4 -31.9 0.0 0.0 0.0 CA
HOH
4.559
2.782
O
O
CA
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 VAL A:157 A:157 0.0 0.0 H -61.2 -29.7 0.0 0.0 0.0 CA
HOH
4.673
4.414
O
CG2
CA
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 VAL A:157 A:157 0.0 0.0 H -64.4 -32.9 0.0 0.0 0.0 CA
3L9
HOH
4.646
6.366
2.873
O
CG1
O
CA
O23
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 VAL A:157 A:157 0.0 0.0 H -60.0 -32.4 0.0 0.0 0.0 CA
HOH
4.709
2.847
O
O
CA
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 VAL A:157 A:157 0.0 0.0 H -60.6 -32.9 0.0 0.0 0.0 5J7
CA
HOH
5.243
4.646
2.821
HG13
O
O
O09
CA
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 VAL A:157 A:157 0.0 0.0 H -61.4 -31.6 0.0 0.0 0.0 5QP
CA
HOH
9.978
4.691
2.820
O
O
O
HAK1
CA
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 VAL A:157 A:157 0.0 0.0 H -54.4 -30.7 0.0 0.0 0.0 CA
HOH
4.640
2.919
O
O
CA
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 VAL A:157 A:157 0.0 0.0 H -60.4 -32.0 0.0 0.0 0.0 CA
HOH
4.695
2.830
O
O
CA
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 VAL A:157 A:157 1.0 0.006 H -56.0 -35.7 1.0 0.006 0.0 CA
HOH
4.646
2.899
O
O
CA
O
VAL B:157 B:157 0.0 0.0 H -54.9 -36.6 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 VAL A:157 A:157 0.0 0.0 H -60.7 -32.0 0.0 0.0 0.0 CA
ZXU
HOH
4.713
5.148
2.817
O
HG13
O
CA
HO25
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 VAL A:157 A:157 0.0 0.0 H -59.7 -33.2 0.0 0.0 0.0 ZXY
CA
HOH
5.322
4.690
2.838
HG13
O
O
O26
CA
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 VAL A:157 A:157 0.0 0.0 H -62.3 -33.2 0.0 0.0 0.0 GLC
G6D
CA
HOH
6.369
6.447
4.705
2.585
CG1
CG1
O
O
O3
O2
CA
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 VAL A:157 A:157 0.0 0.0 H -62.4 -30.1 0.0 0.0 0.0 GLC
GLC
G6D
CA
HOH
9.921
6.475
6.383
4.737
2.783
CG1
CG1
CG1
O
O
O4
O3
O2
CA
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 VAL A:157 A:157 0.0 0.0 H -59.5 -33.2 0.0 0.0 0.0 GLC
G6D
CA
HOH
6.546
6.274
4.658
2.637
CG1
CG1
O
O
O3
O2
CA
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 VAL A:157 A:157 0.0 0.0 H -64.1 -30.5 0.0 0.0 0.0 GLC
GLC
G6D
CA
HOH
9.940
6.418
6.340
4.736
2.818
CG1
CG1
CG1
O
O
O4
O3
O2
CA
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 VAL A:157 A:157 0.0 0.0 H -68.1 -23.6 0.0 0.0 0.0 CA
HOH
4.847
2.672
O
O
CA
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 VAL A:157 A:157 0.0 0.0 H -60.8 -32.5 0.0 0.0 0.0 CA
HOH
4.705
2.879
O
O
CA
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 VAL A:157 A:157 0.0 0.0 H -61.4 -32.7 0.0 0.0 0.0 AAO
HOH
6.480
4.122
CG1
CG2
O2C
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 VAL A:157 A:157 0.0 0.0 H -65.0 -26.5 0.0 0.0 0.0 CA
HOH
4.821
2.927
O
CG2
CA
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 VAL A:157 A:157 0.0 0.0 H -63.4 -26.6 0.0 0.0 0.0 ARE
CA
HOH
6.643
4.864
2.731
CG1
O
O
O2C
CA
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -58.9 -32.2 0.0 0.0 0.0 CA
HOH
4.764
2.791
O
O
CA
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -61.5 -30.6 0.0 0.0 0.0 CA
AZI
HOH
4.724
7.293
2.789
O
CG1
O
CA
N2
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 VAL A:157 A:157 0.0 0.0 H -61.0 -34.1 0.0 0.0 0.0 ARE
CA
HOH
5.952
4.809
4.032
CG1
O
CG2
O3G
CA
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 VAL A:157 A:157 0.0 0.0 H -67.4 -24.6 0.0 0.0 0.0 CA
HOH
4.825
2.983
O
O
CA
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 VAL A:157 A:157 0.0 0.0 H -57.9 -32.0 0.0 0.0 0.0 GLC
GLC
GLC
CA
HOH
5.624
5.999
9.314
4.696
2.884
HG13
HG13
C
O
O
HO3
O2
H2
CA
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 VAL A:157 A:157 0.0 0.0 H -55.9 -28.8 0.0 0.0 0.0 CA
HOH
4.711
2.840
O
O
CA
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 VAL A:157 A:157 0.0 0.0 H -63.1 -28.5 0.0 0.0 0.0 CA
HOH
4.714
2.903
O
O
CA
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 VAL A:157 A:157 0.0 0.0 H -61.3 -22.6 0.0 0.0 0.0 CA
HOH
4.831
3.040
O
O
CA
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 VAL A:157 A:157 0.0 0.0 H -60.8 -29.6 0.0 0.0 0.0 GLC
GLC
GLC
CA
HOH
6.252
6.398
9.840
4.759
2.540
CG1
CG1
N
O
O
O3
O2
O3
CA
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 VAL A:157 A:157 0.0 0.0 H -61.1 -32.0 0.0 0.0 0.0 CA
HOH
4.711
2.660
O
O
CA
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 VAL A:157 A:157 0.0 0.0 H -58.3 -33.5 0.0 0.0 0.0 CA
HOH
4.673
2.787
O
O
CA
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 VAL A:157 A:157 0.0 0.0 H -61.9 -30.5 0.0 0.0 0.0 CA
HOH
4.751
6.068
O
N
CA
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 VAL A:157 A:157 0.0 0.0 H -62.9 -23.9 0.0 0.0 0.0 CA
HOH
4.686
2.901
O
O
CA
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 VAL A:157 A:157 0.0 0.0 H -57.2 -31.8 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.647
6.402
4.697
2.905
CG1
CG1
O
O
O3
O2
CA
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 VAL A:157 A:157 0.0 0.0 H -51.3 -38.9 0.0 0.0 0.0 CA
HOH
4.769
2.891
O
O
CA
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 VAL A:157 A:157 0.0 0.0 H -69.5 -36.9 0.0 0.0 0.0 CA
HOH
4.010
2.514
O
O
CA
O
VAL B:157 B:157 0.0 0.0 H -69.5 -36.9 0.0 0.0 0.0 CA
HOH
4.009
2.514
O
O
CA
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 VAL A:157 X:157 0.0 0.0 H -62.1 -30.5 0.0 0.0 0.0 AGL
CA
HOH
6.689
4.711
2.824
CG1
O
O
O2
CA
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 VAL A:157 A:157 0.0 0.0 H -56.2 -30.0 0.0 0.0 0.0 CA
HOH
4.740
2.956
O
O
CA
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 VAL A:157 X:157 1.0 0.006 H -64.0 -28.7 1.0 0.006 0.0 CA
TAM
HOH
4.629
8.459
2.869
O
CG1
O
CA
O4
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 VAL A:157 A:157 0.0 0.0 H -61.4 -30.0 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.523
6.385
4.701
2.828
CG1
CG1
O
O
O3
O2
CA
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 VAL A:157 A:157 0.0 0.0 H -56.6 -33.4 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.671
6.453
4.803
2.902
CG1
CG1
O
O
O3
O2
CA
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 VAL A:157 X:157 0.0 0.0 H -56.4 -34.7 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.497
6.458
4.725
2.849
CG1
CG1
O
O
O3
O2
CA
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 VAL A:157 A:157 0.0 0.0 H -58.2 -29.0 0.0 0.0 0.0 CA
HOH
4.711
2.867
O
O
CA
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 VAL A:157 A:157 0.0 0.0 H -54.0 -34.9 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.483
6.529
4.768
2.930
CG1
CG1
O
O
O3
O2
CA
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 VAL A:157 A:157 0.0 0.0 H -59.7 -35.0 0.0 0.0 0.0 GLC
AGL
CA
HOH
6.522
6.479
4.658
2.750
CG1
CG1
O
O
O3
O2
CA
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 VAL A:157 A:157 0.0 0.0 H -64.8 -31.8 0.0 0.0 0.0 CA
HOH
4.744
2.876
O
O
CA
O
VAL B:157 B:157 0.0 0.0 H -71.7 -20.7 NA NA NA
VAL C:157 C:157 1.0 0.006 H -66.0 -26.1 NA NA NA
VAL D:157 D:157 1.0 0.006 H -57.9 -33.8 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 VAL A:157 A:157 0.0 0.0 H -71.9 -16.3 0.0 0.0 0.0 CA
HOH
4.750
3.948
O
CG2
CA
O
VAL C:157 C:157 0.0 0.0 H -59.5 -14.6 NA NA NA
VAL E:157 E:157 0.0 0.0 H -70.2 -31.4 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 VAL A:157 A:157 0.0 0.0 H -63.7 -33.0 0.0 0.0 0.0 HOH
2.899
O
O
VAL B:157 B:157 0.0 0.0 H -59.5 -33.8 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 VAL A:157 A:157 0.0 0.0 H -67.0 -27.3 0.0 0.0 0.0 CA
HOH
5.108
2.910
O
O
CA
O
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 VAL A:157 A:157 0.0 0.0 H -77.8 -20.8 0.0 0.0 0.0 BGC
DAF
CA
HOH
7.011
6.865
4.644
2.828
CG2
CG2
O
O
O3
O2
CA
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 VAL A:157 A:157 1.0 0.006 H -72.9 -27.5 1.0 0.006 0.0 CA
HOH
4.495
6.582
O
O
CA
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 VAL A:157 A:157 0.0 0.0 H -56.3 -38.8 0.0 0.0 0.0 GLC
GLC
GLC
CA
HOH
8.390
9.111
9.457
4.674
2.819
HG12
HA
C
O
O
O1
HO3
H2
CA
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 VAL A:157 A:157 0.0 0.0 H -60.5 -36.2 0.0 0.0 0.0 GLC
GLC
GLC
CA
HOH
8.583
6.115
7.575
4.699
2.837
HA
HA
HG12
O
O
HO6
HO6
H1
CA
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 VAL A:157 A:157 0.0 0.0 H -62.7 -32.4 0.0 0.0 0.0 CA
HOH
4.689
2.793
O
O
CA
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 VAL A:157 A:157 0.0 0.0 H -64.2 -39.8 0.0 0.0 0.0 MA1
GLC
CA
HOH
6.892
6.749
4.769
2.788
CG1
CG1
O
O
O3
O2
CA
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 VAL A:157 A:157 0.0 0.0 H -65.4 -27.8 0.0 0.0 0.0 BGC
AC1
CA
HOH
6.315
6.561
4.594
2.885
CG2
CG2
O
O
O3
O2
CA
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 VAL A:157 A:157 0.0 0.0 H -59.2 -34.6 0.0 0.0 0.0 GLC
BGC
AC1
CA
HOH
6.474
6.474
6.282
4.671
2.821
CG1
CG1
CG1
O
O
O3
O3
O2
CA
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 VAL A:157 A:157 0.0 0.0 H -63.4 -36.3 0.0 0.0 0.0 CA
HOH
4.699
2.844
O
O
CA
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 VAL A:157 P:157 1.0 0.006 H -63.4 -27.4 1.0 0.006 0.0 CA
HOH
5.040
2.804
O
O
CA
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 VAL A:157 A:157 0.0 0.0 H -54.3 -38.8 0.0 0.0 0.0 CA
HOH
4.716
2.888
O
O
CA
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 VAL A:157 A:157 0.0 0.0 H -50.9 -41.3 0.0 0.0 0.0 BGC
GLC
AGL
CA
HOH
9.924
6.175
6.407
4.666
2.871
CG2
CG1
CG1
O
O
O3
O3
O2
CA
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 VAL A:157 A:157 0.0 0.0 H -61.7 -35.9 0.0 0.0 0.0 CA
HOH
4.697
2.917
O
O
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 VAL A:172 A:172 0.0 0.0 H -60.3 -24.6
af-p19961-f1 1 P19961 98.83 0.0 VAL A:172 A:172 0.0 0.0 H -60.3 -21.9
af-p0dte7-f1 1 P0DTE7 96.87 0.0 VAL A:172 A:172 0.0 0.0 H -59.6 -22.3
af-p0dte8-f1 1 P0DTE8 96.87 0.0 VAL A:172 A:172 0.0 0.0 H -59.3 -22.6
af-p0dub6-f1 1 P0DUB6 96.87 0.0 VAL A:172 A:172 0.0 0.0 H -60.8 -24.2