Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104162184 . T A CCDS783.1:NM_000699.2:c.522gaT>gaA_NP_000690.1:p.174D>E Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 ASP A:159 A:159 9.0 0.06 H -100.7 -12.1 9.0 0.06 0.0 CA
HOH
4.617
3.888
N
O
CA
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 ASP A:159 A:159 12.0 0.08 H -97.2 -14.7 12.0 0.08 0.0 CA
HOH
4.547
2.748
N
OD1
CA
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 ASP A:159 A:159 5.0 0.033 H -99.2 -11.7 5.0 0.033 0.0 CA
HOH
4.562
2.747
N
OD1
CA
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 ASP A:159 A:159 10.0 0.067 H -104.8 -10.0 10.0 0.067 0.0 CA
HOH
4.570
2.640
N
OD1
CA
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 ASP A:159 A:159 15.0 0.1 H -93.7 -10.3 15.0 0.1 0.0 CA
HOH
4.530
2.698
N
OD1
CA
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 ASP A:159 A:159 10.0 0.067 H -90.8 -12.9 10.0 0.067 0.0 CA
HOH
4.585
2.582
N
OD2
CA
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 ASP A:159 A:159 12.0 0.08 H -94.0 -12.3 12.0 0.08 0.0 CA
HOH
4.516
2.615
N
OD2
CA
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:159 A:159 15.0 0.1 H -91.2 -13.5 15.0 0.1 0.0 CA
HOH
4.555
2.665
N
OD2
CA
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:159 A:159 17.0 0.113 H -95.6 -10.3 17.0 0.113 0.0 CA
HOH
4.599
2.562
N
OD2
CA
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:159 A:159 5.0 0.033 H -93.9 -14.2 5.0 0.033 0.0 CA
HOH
4.575
2.681
N
OD1
CA
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:159 A:159 10.0 0.067 H -90.6 -15.7 10.0 0.067 0.0 CA
HOH
4.618
2.728
N
O
CA
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:159 A:159 15.0 0.1 H -92.0 -12.7 15.0 0.1 0.0 CA
HOH
4.448
2.563
N
OD1
CA
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:159 A:159 13.0 0.087 H -98.8 -10.3 13.0 0.087 0.0 CA
HOH
4.500
2.513
N
OD1
CA
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:159 A:159 16.0 0.107 H -96.0 -11.9 16.0 0.107 0.0 CA
HOH
4.570
2.624
N
OD2
CA
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:159 A:159 14.0 0.093 H -92.8 -14.3 14.0 0.093 0.0 CA
HOH
4.660
2.501
N
OD2
CA
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:159 A:159 12.0 0.08 H -100.2 -11.8 12.0 0.08 0.0 CA
AZI
HOH
4.549
7.149
2.580
N
O
OD2
CA
N1
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 ASP A:159 A:159 8.0 0.053 H -98.5 -9.7 8.0 0.053 0.0 CA
HOH
4.481
2.509
N
OD2
CA
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 ASP A:159 A:159 8.0 0.053 H -100.8 -9.1 8.0 0.053 0.0 B0D
CA
HOH
5.210
4.490
2.620
OD2
N
OD2
O2
CA
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 ASP A:159 A:159 6.0 0.04 H -98.4 -10.4 6.0 0.04 0.0 B0D
CA
HOH
5.169
4.481
2.574
OD2
N
OD2
O2
CA
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 ASP A:159 A:159 17.0 0.113 H -109.0 -8.8 17.0 0.113 0.0 CA
HOH
4.515
2.660
N
OD2
CA
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 ASP A:159 A:159 12.0 0.08 H -97.9 -9.3 12.0 0.08 0.0 CA
HOH
4.480
2.690
N
OD2
CA
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 ASP A:159 A:159 18.0 0.12 H -98.6 -4.9 18.0 0.12 0.0 CA
HOH
4.505
2.812
N
O
CA
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 ASP A:159 A:159 12.0 0.08 H -101.9 -10.2 12.0 0.08 0.0 CA
HOH
4.284
2.661
HA
OD2
CA
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 ASP A:159 A:159 15.0 0.1 H -104.0 -11.9 15.0 0.1 0.0 CA
HOH
4.249
2.682
HA
OD2
CA
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 ASP A:159 A:159 12.0 0.08 H -102.7 -8.7 12.0 0.08 0.0 CA
HOH
4.302
2.608
HA
OD2
CA
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 ASP A:159 A:159 9.0 0.06 H -103.3 -9.7 9.0 0.06 0.0 CA
HOH
4.556
2.490
N
OD1
CA
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 ASP A:159 A:159 12.0 0.08 H -102.4 -9.2 12.0 0.08 0.0 CA
HOH
4.272
2.632
HA
OD2
CA
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 ASP A:159 A:159 9.0 0.06 H -94.8 -2.0 9.0 0.06 0.0 CA
HOH
4.531
4.235
N
N
CA
O
ASP B:159 B:159 19.0 0.127 H -94.8 -1.0 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 ASP A:159 A:159 12.0 0.08 H -101.6 -11.3 12.0 0.08 0.0 CA
HOH
4.299
2.650
HA
OD2
CA
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 ASP A:159 A:159 13.0 0.087 H -102.4 -10.3 13.0 0.087 0.0 CA
HOH
4.280
2.615
HA
OD2
CA
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:159 A:159 19.0 0.127 H -96.4 -9.3 19.0 0.127 0.0 CA
HOH
4.615
2.378
N
OD2
CA
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:159 A:159 19.0 0.127 H -101.1 -9.5 19.0 0.127 0.0 CA
HOH
4.561
2.712
N
OD2
CA
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:159 A:159 12.0 0.08 H -102.8 -9.3 12.0 0.08 0.0 BGC
GLC
CA
HOH
4.720
6.146
4.563
2.575
OD2
OD2
N
OD1
O3
O2
CA
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:159 A:159 12.0 0.08 H -99.1 -10.7 12.0 0.08 0.0 GLC
GLC
CA
HOH
6.263
4.630
4.597
2.647
OD2
OD2
N
OD2
O3
O2
CA
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 ASP A:159 A:159 12.0 0.08 H -106.4 -8.6 12.0 0.08 0.0 CA
HOH
4.600
2.916
N
OD1
CA
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:159 A:159 19.0 0.127 H -99.0 -11.6 19.0 0.127 0.0 CA
HOH
4.598
2.538
N
OD2
CA
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:159 A:159 20.0 0.133 H -98.5 -12.5 20.0 0.133 0.0 HOH
2.735
OD1
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:159 A:159 17.0 0.113 H -101.9 -11.9 17.0 0.113 0.0 CA
HOH
4.617
2.504
N
OD2
CA
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:159 A:159 16.0 0.107 H -98.2 -10.1 16.0 0.107 0.0 CA
HOH
4.703
2.842
N
OD1
CA
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 ASP A:159 A:159 14.0 0.093 H -96.8 -10.9 14.0 0.093 0.0 CA
HOH
4.609
2.534
N
OD1
CA
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 ASP A:159 A:159 17.0 0.113 H -100.4 -9.5 17.0 0.113 0.0 CA
AZI
HOH
4.561
7.196
2.569
N
O
OD2
CA
N1
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 ASP A:159 A:159 11.0 0.073 H -88.8 -18.2 11.0 0.073 0.0 CA
HOH
4.659
2.775
N
OD1
CA
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 ASP A:159 A:159 16.0 0.107 H -101.4 -11.1 16.0 0.107 0.0 CA
HOH
4.519
2.759
N
O
CA
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 ASP A:159 A:159 9.0 0.06 H -101.6 -9.8 9.0 0.06 0.0 GLC
CA
HOH
4.194
4.272
2.724
OD1
HA
OD2
HO3
CA
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 ASP A:159 A:159 12.0 0.08 H -101.1 -10.4 12.0 0.08 0.0 CA
HOH
4.603
2.741
N
OD2
CA
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ASP A:159 A:159 15.0 0.1 H -101.8 -10.8 15.0 0.1 0.0 CA
HOH
4.493
2.680
N
OD1
CA
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ASP A:159 A:159 10.0 0.067 H -103.7 -6.2 10.0 0.067 0.0 CA
HOH
4.650
2.826
N
O
CA
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 ASP A:159 A:159 14.0 0.093 H -100.4 -10.8 14.0 0.093 0.0 GLC
GLC
CA
HOH
5.898
4.884
4.473
2.651
OD2
OD2
N
OD1
O3
O2
CA
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 ASP A:159 A:159 13.0 0.087 H -98.8 -14.1 13.0 0.087 0.0 CA
HOH
4.563
2.666
N
OD1
CA
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 ASP A:159 A:159 15.0 0.1 H -95.1 -10.6 15.0 0.1 0.0 CA
HOH
4.588
2.827
N
OD1
CA
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 ASP A:159 A:159 17.0 0.113 H -96.4 -11.8 17.0 0.113 0.0 CA
HOH
4.543
2.646
N
OD1
CA
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 ASP A:159 A:159 6.0 0.04 H -99.2 -4.6 6.0 0.04 0.0 CA
HOH
4.472
2.642
N
OD2
CA
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 ASP A:159 A:159 10.0 0.067 H -99.9 -14.6 10.0 0.067 0.0 CA
HOH
4.483
2.536
N
OD2
CA
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 ASP A:159 A:159 6.0 0.04 H -104.6 -15.4 6.0 0.04 0.0 CA
HOH
4.538
2.553
N
OD1
CA
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 ASP A:159 A:159 7.0 0.047 H -98.6 -6.2 7.0 0.047 0.0 CA
HOH
4.266
2.660
N
OD2
CA
O
ASP B:159 B:159 9.0 0.06 H -98.6 -6.2 9.0 0.06 0.0 CA
HOH
4.267
2.660
N
OD2
CA
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 ASP A:159 X:159 7.0 0.047 H -101.5 -12.2 7.0 0.047 0.0 CA
HOH
4.459
2.614
N
OD1
CA
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 ASP A:159 A:159 6.0 0.04 H -99.1 -5.7 6.0 0.04 0.0 CA
HOH
4.623
2.746
N
OD2
CA
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 ASP A:159 X:159 5.0 0.033 H -101.6 -11.6 5.0 0.033 0.0 CA
HOH
4.394
2.579
N
OD2
CA
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 ASP A:159 A:159 6.0 0.04 H -101.5 -10.3 6.0 0.04 0.0 CA
HOH
4.473
2.646
N
OD2
CA
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 ASP A:159 A:159 8.0 0.053 H -97.0 -18.8 8.0 0.053 0.0 CA
HOH
4.589
2.563
N
OD2
CA
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 ASP A:159 X:159 11.0 0.073 H -97.8 -10.9 11.0 0.073 0.0 CA
HOH
4.479
2.579
N
OD2
CA
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 ASP A:159 A:159 8.0 0.053 H -94.9 -12.1 8.0 0.053 0.0 CA
HOH
4.502
2.709
N
OD2
CA
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 ASP A:159 A:159 9.0 0.06 H -100.6 -12.2 9.0 0.06 0.0 GLC
GLC
CA
HOH
6.562
4.605
4.587
2.628
OD2
OD2
N
OD1
O3
O2
CA
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ASP A:159 A:159 23.0 0.153 H -101.7 -18.3 23.0 0.153 0.0 CA
HOH
4.558
2.485
N
OD1
CA
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 ASP A:159 A:159 9.0 0.06 H -98.6 -16.5 9.0 0.06 0.0 CA
HOH
4.502
2.714
N
OD1
CA
O
ASP B:159 B:159 11.0 0.073 H -105.0 -13.4 NA NA NA
ASP C:159 C:159 11.0 0.073 H -101.9 -14.9 NA NA NA
ASP D:159 D:159 10.0 0.067 H -102.4 -14.3 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 ASP A:159 A:159 12.0 0.08 H -113.1 -11.5 12.0 0.08 0.0 CA
HOH
4.463
2.677
N
OD1
CA
O
ASP C:159 C:159 7.0 0.047 H -88.6 -20.6 NA NA NA
ASP E:159 E:159 14.0 0.093 H -109.0 -10.4 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 ASP A:159 A:159 10.0 0.067 H -104.9 -18.3 9.0 0.06 0.007 C:None:0.007
HOH
2.562
OD1
O
ASP B:159 B:159 7.0 0.047 H -105.5 -13.1 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 ASP A:159 A:159 14.0 0.093 H -100.3 -10.7 14.0 0.093 0.0 CA
HOH
5.231
1.940
N
OD2
CA
H1
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 ASP A:159 A:159 2.0 0.013 H -105.2 -14.0 2.0 0.013 0.0 CA
HOH
4.371
2.720
N
OD2
CA
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 ASP A:159 A:159 4.0 0.027 H -108.4 -14.5 4.0 0.027 0.0 CA
HOH
4.222
2.565
N
OD2
CA
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 ASP A:159 A:159 13.0 0.087 H -106.2 -9.6 13.0 0.087 0.0 GLC
GLC
CA
HOH
9.966
4.331
4.153
2.584
C
OD1
HA
OD2
HO3
HO3
CA
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 ASP A:159 A:159 12.0 0.08 H -103.8 -9.2 12.0 0.08 0.0 GLC
CA
HOH
9.355
4.264
2.614
C
HA
OD1
HO6
CA
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 ASP A:159 A:159 11.0 0.073 H -107.3 -11.6 11.0 0.073 0.0 CL
CA
BGC
HOH
9.544
4.456
4.664
2.610
OD2
N
OD2
OD1
CL
CA
O3
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 ASP A:159 A:159 5.0 0.033 H -102.8 -13.6 5.0 0.033 0.0 CA
HOH
4.453
2.669
N
OD2
CA
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 ASP A:159 A:159 10.0 0.067 H -99.9 -14.1 10.0 0.067 0.0 CA
HOH
4.524
2.670
N
O
CA
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 ASP A:159 A:159 11.0 0.073 H -105.9 -12.0 11.0 0.073 0.0 CL
CA
CL
HOH
9.573
4.426
5.387
2.685
OD2
N
OD2
OD2
CL
CA
CL
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 ASP A:159 A:159 11.0 0.073 H -99.0 -13.6 11.0 0.073 0.0 CA
HOH
4.461
2.658
N
OD1
CA
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 ASP A:159 P:159 13.0 0.087 H -95.5 -20.7 13.0 0.087 0.0 CA
HOH
4.696
2.751
N
OD2
CA
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 ASP A:159 A:159 4.0 0.027 H -103.2 -6.5 4.0 0.027 0.0 CA
HOH
4.535
2.682
N
O
CA
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 ASP A:159 A:159 9.0 0.06 H -86.8 -20.7 9.0 0.06 0.0 CA
HOH
4.573
2.855
N
O
CA
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 ASP A:159 A:159 10.0 0.067 H -106.0 -11.6 10.0 0.067 0.0 CA
HOH
4.438
2.283
N
OD2
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 ASP A:174 A:174 12.0 0.08 H -118.8 -2.9
af-p19961-f1 1 P19961 98.83 0.0 ASP A:174 A:174 12.0 0.08 H -112.7 -6.5
af-p0dte7-f1 1 P0DTE7 96.87 0.0 ASP A:174 A:174 9.0 0.06 H -114.9 -7.7
af-p0dte8-f1 1 P0DTE8 96.87 0.0 ASP A:174 A:174 11.0 0.073 H -115.0 -7.0
af-p0dub6-f1 1 P0DUB6 96.87 0.0 ASP A:174 A:174 11.0 0.073 H -114.3 -8.7