Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104162351 . A C CCDS783.1:NM_000699.2:c.689cAt>cCt_NP_000690.1:p.230H>P Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 HIS A:215 A:215 84.0 0.431 -76.1 170.4 84.0 0.431 0.0 HOH
3.792
CB
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 HIS A:215 A:215 82.0 0.421 -76.8 164.8 82.0 0.421 0.0 HOH
2.990
CB
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 HIS A:215 A:215 81.0 0.415 -76.1 168.5 81.0 0.415 0.0 HOH
3.300
CB
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 HIS A:215 A:215 83.0 0.426 -75.1 162.3 83.0 0.426 0.0 HOH
3.037
CD2
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 HIS A:215 A:215 86.0 0.441 -81.8 174.0 86.0 0.441 0.0 HOH
2.946
O
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 HIS A:215 A:215 77.0 0.395 -80.5 170.0 77.0 0.395 0.0 HOH
3.426
CB
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 HIS A:215 A:215 82.0 0.421 -76.2 178.1 82.0 0.421 0.0 HOH
3.316
CB
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 HIS A:215 A:215 78.0 0.4 -77.3 170.2 78.0 0.4 0.0 HOH
3.114
O
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 HIS A:215 A:215 83.0 0.426 -76.3 168.5 83.0 0.426 0.0 HOH
3.039
O
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 HIS A:215 A:215 80.0 0.41 -78.9 154.0 80.0 0.41 0.0 HOH
3.439
CB
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 HIS A:215 A:215 82.0 0.421 -72.2 169.6 82.0 0.421 0.0 HOH
2.759
O
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 HIS A:215 A:215 80.0 0.41 -69.3 -177.3 80.0 0.41 0.0 HOH
4.121
CB
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 HIS A:215 A:215 83.0 0.426 -80.3 175.9 83.0 0.426 0.0 HOH
2.757
O
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 HIS A:215 A:215 83.0 0.426 -75.2 170.6 83.0 0.426 0.0 HOH
3.068
O
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 HIS A:215 A:215 85.0 0.436 -72.1 171.6 85.0 0.436 0.0 HOH
3.134
O
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 HIS A:215 A:215 79.0 0.405 -79.5 175.3 79.0 0.405 0.0 NA
HOH
8.559
2.941
O
O
NA
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 HIS A:215 A:215 80.0 0.41 -78.8 166.5 80.0 0.41 0.0 HOH
3.371
CB
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 HIS A:215 A:215 79.0 0.405 -80.2 166.1 79.0 0.405 0.0 HOH
2.969
O
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 HIS A:215 A:215 78.0 0.4 -78.3 166.0 78.0 0.4 0.0 HOH
2.917
O
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 HIS A:215 A:215 71.0 0.364 -76.0 156.8 71.0 0.364 0.0 HOH
4.329
CB
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 HIS A:215 A:215 79.0 0.405 -76.5 165.5 79.0 0.405 0.0 HOH
3.260
O
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 HIS A:215 A:215 81.0 0.415 -65.7 160.3 81.0 0.415 0.0 HOH
2.961
O
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 HIS A:215 A:215 78.0 0.4 -69.3 161.1 78.0 0.4 0.0 HOH
2.696
HB3
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 HIS A:215 A:215 78.0 0.4 -67.5 160.0 78.0 0.4 0.0 HOH
2.354
HD2
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 HIS A:215 A:215 78.0 0.4 -71.4 162.7 78.0 0.4 0.0 HOH
2.678
HB3
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 HIS A:215 A:215 84.0 0.431 -63.4 165.1 84.0 0.431 0.0 HOH
2.737
O
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 HIS A:215 A:215 77.0 0.395 -70.1 161.4 77.0 0.395 0.0 HOH
2.604
HD2
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 HIS A:215 A:215 88.0 0.451 -73.5 165.7 88.0 0.451 0.0 HOH
6.954
C
O
HIS B:215 B:215 85.0 0.436 -74.2 164.0 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 HIS A:215 A:215 79.0 0.405 -71.8 162.1 79.0 0.405 0.0 HOH
2.600
HD2
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 HIS A:215 A:215 77.0 0.395 -70.2 162.2 77.0 0.395 0.0 HOH
2.616
HD2
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 HIS A:215 A:215 80.0 0.41 -77.1 170.2 80.0 0.41 0.0 PCA
HOH
9.331
3.157
O
O
CB
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 HIS A:215 A:215 79.0 0.405 -77.2 168.8 79.0 0.405 0.0 PCA
HOH
9.384
2.994
O
O
CB
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 HIS A:215 A:215 85.0 0.436 -75.9 176.0 85.0 0.436 0.0 PCA
HOH
9.518
2.880
O
O
CB
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 HIS A:215 A:215 83.0 0.426 -79.0 169.2 83.0 0.426 0.0 PCA
HOH
9.635
2.740
O
NE2
CB
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 HIS A:215 A:215 87.0 0.446 -71.9 177.5 87.0 0.446 0.0 HOH
2.818
O
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 HIS A:215 A:215 81.0 0.415 -73.5 169.1 81.0 0.415 0.0 HOH
2.974
O
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 HIS A:215 A:215 82.0 0.421 -73.1 166.4 82.0 0.421 0.0 HOH
3.001
O
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 HIS A:215 A:215 83.0 0.426 -78.4 169.5 83.0 0.426 0.0 HOH
3.178
O
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 HIS A:215 A:215 83.0 0.426 -79.2 170.7 83.0 0.426 0.0 HOH
3.235
O
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 HIS A:215 A:215 82.0 0.421 -75.8 170.8 82.0 0.421 0.0 HOH
2.985
O
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 HIS A:215 A:215 80.0 0.41 -79.5 173.7 80.0 0.41 0.0 NA
HOH
9.828
2.916
O
O
NA
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 HIS A:215 A:215 83.0 0.426 -73.2 170.6 83.0 0.426 0.0 HOH
3.230
O
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 HIS A:215 A:215 83.0 0.426 -79.1 169.1 83.0 0.426 0.0 HOH
3.146
CB
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 HIS A:215 A:215 78.0 0.4 -70.2 161.8 78.0 0.4 0.0 HOH
2.530
HD2
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 HIS A:215 A:215 88.0 0.451 -74.8 175.5 88.0 0.451 0.0 HOH
2.822
O
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 HIS A:215 A:215 81.0 0.415 -76.0 163.8 81.0 0.415 0.0 HOH
3.075
O
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 HIS A:215 A:215 87.0 0.446 -76.2 169.2 87.0 0.446 0.0 HOH
2.744
O
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 HIS A:215 A:215 81.0 0.415 -68.2 165.1 81.0 0.415 0.0 HOH
4.309
CB
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 HIS A:215 A:215 82.0 0.421 -77.7 169.1 82.0 0.421 0.0 HOH
2.920
O
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 HIS A:215 A:215 85.0 0.436 -73.3 173.7 85.0 0.436 0.0 HOH
4.255
CB
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 HIS A:215 A:215 85.0 0.436 -76.3 171.0 85.0 0.436 0.0 HOH
4.347
CB
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 HIS A:215 A:215 86.0 0.441 -76.4 168.4 86.0 0.441 0.0 HOH
3.221
CD2
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 HIS A:215 A:215 81.0 0.415 -66.6 162.2 81.0 0.415 0.0 HOH
2.702
O
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 HIS A:215 A:215 82.0 0.421 -75.7 166.2 82.0 0.421 0.0 HOH
3.168
O
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 HIS A:215 A:215 96.0 0.492 -73.9 -167.9 96.0 0.492 0.0 HOH
2.746
NE2
O
HIS B:215 B:215 97.0 0.497 -73.9 -167.9 97.0 0.497 0.0 HOH
2.746
NE2
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 HIS A:215 X:215 80.0 0.41 -66.4 158.8 80.0 0.41 0.0 HOH
2.792
O
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 HIS A:215 A:215 82.0 0.421 -65.7 166.6 82.0 0.421 0.0 HOH
2.578
O
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 HIS A:215 X:215 84.0 0.431 -64.2 158.0 84.0 0.431 0.0 HOH
2.821
O
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 HIS A:215 A:215 82.0 0.421 -68.3 163.7 82.0 0.421 0.0 HOH
2.783
O
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 HIS A:215 A:215 87.0 0.446 -72.4 162.1 87.0 0.446 0.0 HOH
3.032
O
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 HIS A:215 X:215 82.0 0.421 -66.4 160.5 82.0 0.421 0.0 HOH
2.943
O
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 HIS A:215 A:215 82.0 0.421 -69.6 164.2 82.0 0.421 0.0 HOH
2.888
O
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 HIS A:215 A:215 81.0 0.415 -65.2 158.7 81.0 0.415 0.0 HOH
2.949
O
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 HIS A:215 A:215 82.0 0.421 -70.3 160.8 82.0 0.421 0.0 HOH
2.961
O
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 HIS A:215 A:215 85.0 0.436 -68.9 159.1 85.0 0.436 0.0 HOH
2.699
NE2
O
HIS B:215 B:215 87.0 0.446 -73.7 164.6 NA NA NA
HIS C:215 C:215 94.0 0.482 -74.0 162.4 NA NA NA
HIS D:215 D:215 85.0 0.436 -70.3 159.4 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 HIS A:215 A:215 92.0 0.472 -71.9 165.4 92.0 0.472 0.0 HOH
2.191
O
O
HIS C:215 C:215 91.0 0.467 -84.4 168.9 NA NA NA
HIS E:215 E:215 96.0 0.492 -77.7 166.7 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 HIS A:215 A:215 100.0 0.513 -79.6 168.6 100.0 0.513 0.0 HOH
2.753
ND1
O
HIS B:215 B:215 86.0 0.441 -71.8 161.0 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 HIS A:215 A:215 87.0 0.446 -75.8 166.6 87.0 0.446 0.0 HOH
3.735
HD1
O
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 HIS A:215 A:215 83.0 0.426 -74.9 159.9 83.0 0.426 0.0 HOH
3.680
CB
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 HIS A:215 A:215 89.0 0.456 -73.0 174.9 89.0 0.456 0.0 HOH
6.758
C
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 HIS A:215 A:215 80.0 0.41 -67.5 154.3 80.0 0.41 0.0 HOH
2.695
HD2
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 HIS A:215 A:215 80.0 0.41 -66.6 153.7 80.0 0.41 0.0 HOH
2.505
HD2
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 HIS A:215 A:215 78.0 0.4 -64.7 153.2 78.0 0.4 0.0 HOH
3.058
NE2
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 HIS A:215 A:215 93.0 0.477 -77.4 168.9 93.0 0.477 0.0 HOH
3.667
ND1
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 HIS A:215 A:215 79.0 0.405 -75.9 161.2 79.0 0.405 0.0 HOH
2.728
NE2
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 HIS A:215 A:215 81.0 0.415 -63.0 157.0 81.0 0.415 0.0 CL
EDO
HOH
7.208
6.064
2.864
C
O
NE2
CL
C2
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 HIS A:215 A:215 81.0 0.415 -73.0 160.7 81.0 0.415 0.0 EDO
HOH
6.365
2.819
O
NE2
C1
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 HIS A:215 P:215 87.0 0.446 -53.7 164.0 87.0 0.446 0.0 HOH
2.985
CE1
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 HIS A:215 A:215 79.0 0.405 -72.2 164.2 79.0 0.405 0.0 HOH
2.883
NE2
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 HIS A:215 A:215 78.0 0.4 -73.1 158.3 78.0 0.4 0.0 HOH
3.045
NE2
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 HIS A:215 A:215 89.0 0.456 -63.8 159.0 89.0 0.456 0.0 HOH
3.868
NE2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 HIS A:230 A:230 86.0 0.441 -63.1 160.3
af-p19961-f1 1 P19961 98.83 0.0 HIS A:230 A:230 85.0 0.436 -65.9 159.6
af-p0dte7-f1 1 P0DTE7 96.87 0.0 HIS A:230 A:230 84.0 0.431 -66.2 159.5
af-p0dte8-f1 1 P0DTE8 96.87 0.0 HIS A:230 A:230 84.0 0.431 -65.5 160.4
af-p0dub6-f1 1 P0DUB6 96.87 0.0 HIS A:230 A:230 87.0 0.446 -64.6 159.7