Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104163217 . T A CCDS783.1:NM_000699.2:c.789ttT>ttA_NP_000690.1:p.263F>L Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 PHE A:248 A:248 47.0 0.224 T -56.8 -28.6 47.0 0.224 0.0 PCA
HOH
6.502
3.775
O
N
CG
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 PHE A:248 A:248 46.0 0.219 T -59.6 -31.4 46.0 0.219 0.0 HOH
3.466
N
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 PHE A:248 A:248 49.0 0.233 T -58.5 -27.5 49.0 0.233 0.0 HOH
3.545
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 PHE A:248 A:248 47.0 0.224 T -60.5 -24.3 47.0 0.224 0.0 HOH
3.121
CZ
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 PHE A:248 A:248 45.0 0.214 T -59.4 -26.3 45.0 0.214 0.0 HOH
3.702
CD2
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 PHE A:248 A:248 48.0 0.229 T -60.5 -27.8 48.0 0.229 0.0 HOH
3.490
CD2
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 PHE A:248 A:248 46.0 0.219 T -57.3 -25.9 46.0 0.219 0.0 HOH
3.582
CD2
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 PHE A:248 A:248 46.0 0.219 T -61.2 -29.7 46.0 0.219 0.0 HOH
3.543
N
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 PHE A:248 A:248 46.0 0.219 T -61.9 -26.9 46.0 0.219 0.0 HOH
3.505
N
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 PHE A:248 A:248 47.0 0.224 T -59.1 -26.2 47.0 0.224 0.0 HOH
3.504
CD2
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 PHE A:248 A:248 45.0 0.214 T -59.6 -24.9 45.0 0.214 0.0 HOH
3.608
CD2
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 PHE A:248 A:248 45.0 0.214 G -69.0 -28.0 45.0 0.214 0.0 HOH
3.424
CD2
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 PHE A:248 A:248 46.0 0.219 T -60.5 -27.0 46.0 0.219 0.0 HOH
3.678
N
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 PHE A:248 A:248 47.0 0.224 T -57.7 -28.9 47.0 0.224 0.0 HOH
3.681
N
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 PHE A:248 A:248 48.0 0.229 T -58.6 -29.1 48.0 0.229 0.0 HOH
3.454
CD2
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 PHE A:248 A:248 44.0 0.21 T -59.3 -25.4 44.0 0.21 0.0 HOH
3.682
CZ
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 PHE A:248 A:248 46.0 0.219 T -63.8 -25.3 46.0 0.219 0.0 HOH
3.595
CD2
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 PHE A:248 A:248 45.0 0.214 T -60.9 -26.4 45.0 0.214 0.0 B0D
HOH
5.364
3.417
C
CZ
O6
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 PHE A:248 A:248 48.0 0.229 T -60.1 -26.6 48.0 0.229 0.0 B0D
HOH
5.392
3.527
C
N
O6
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 PHE A:248 A:248 51.0 0.243 T -64.5 -25.1 51.0 0.243 0.0 0XR
HOH
4.003
3.337
CZ
CB
C1'
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 PHE A:248 A:248 47.0 0.224 T -60.0 -26.5 47.0 0.224 0.0 HOH
3.486
CZ
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 PHE A:248 A:248 44.0 0.21 T -60.1 -25.9 44.0 0.21 0.0 HOH
3.553
CZ
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 PHE A:248 A:248 44.0 0.21 T -65.6 -25.4 44.0 0.21 0.0 HOH
2.826
HZ
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 PHE A:248 A:248 44.0 0.21 T -63.3 -26.1 44.0 0.21 0.0 HOH
2.988
HZ
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 PHE A:248 A:248 46.0 0.219 T -67.6 -25.7 46.0 0.219 0.0 HOH
2.853
HZ
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 PHE A:248 A:248 43.0 0.205 T -65.6 -23.2 43.0 0.205 0.0 HOH
3.549
N
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 PHE A:248 A:248 44.0 0.21 T -66.7 -24.7 44.0 0.21 0.0 HOH
2.821
HZ
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 PHE A:248 A:248 42.0 0.2 T -60.5 -25.7 42.0 0.2 0.0 HOH
4.188
N
O
PHE B:248 B:248 45.0 0.214 T -59.2 -25.4 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 PHE A:248 A:248 43.0 0.205 T -66.7 -25.2 43.0 0.205 0.0 HOH
2.846
HZ
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 PHE A:248 A:248 44.0 0.21 T -66.1 -25.8 44.0 0.21 0.0 HOH
2.859
HZ
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 PHE A:248 A:248 47.0 0.224 T -57.8 -24.8 47.0 0.224 0.0 PCA
HOH
6.302
3.817
O
CZ
CG
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 PHE A:248 A:248 44.0 0.21 T -59.6 -26.3 44.0 0.21 0.0 PCA
HOH
6.235
3.603
O
CZ
CG
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 PHE A:248 A:248 44.0 0.21 T -56.1 -26.9 44.0 0.21 0.0 PCA
HOH
6.134
3.629
O
N
CG
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 PHE A:248 A:248 42.0 0.2 T -58.7 -27.8 42.0 0.2 0.0 PCA
HOH
6.076
3.719
O
CZ
CG
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 PHE A:248 A:248 46.0 0.219 T -59.2 -26.3 46.0 0.219 0.0 HOH
3.464
N
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 PHE A:248 A:248 49.0 0.233 T -56.9 -27.3 49.0 0.233 0.0 HOH
3.628
N
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 PHE A:248 A:248 46.0 0.219 T -57.6 -29.2 46.0 0.219 0.0 HOH
3.440
N
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 PHE A:248 A:248 46.0 0.219 T -59.2 -30.3 46.0 0.219 0.0 HOH
3.606
N
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 PHE A:248 A:248 49.0 0.233 T -64.0 -27.4 49.0 0.233 0.0 HOH
3.503
N
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 PHE A:248 A:248 47.0 0.224 T -57.2 -30.5 47.0 0.224 0.0 HOH
3.614
CD2
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 PHE A:248 A:248 46.0 0.219 T -59.1 -27.5 46.0 0.219 0.0 HOH
3.629
CD2
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 PHE A:248 A:248 51.0 0.243 T -57.2 -31.7 51.0 0.243 0.0 HOH
3.578
CD2
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 PHE A:248 A:248 48.0 0.229 T -59.2 -29.8 48.0 0.229 0.0 HOH
2.843
CZ
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 PHE A:248 A:248 45.0 0.214 G -65.4 -24.0 45.0 0.214 0.0 HOH
2.982
HZ
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 PHE A:248 A:248 45.0 0.214 T -62.0 -27.8 45.0 0.214 0.0 HOH
3.707
N
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PHE A:248 A:248 46.0 0.219 T -62.3 -27.1 46.0 0.219 0.0 HOH
3.589
N
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PHE A:248 A:248 46.0 0.219 T -62.3 -26.5 46.0 0.219 0.0 HOH
3.339
N
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 PHE A:248 A:248 46.0 0.219 T -59.8 -24.6 46.0 0.219 0.0 HOH
3.587
N
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 PHE A:248 A:248 47.0 0.224 T -58.3 -32.4 47.0 0.224 0.0 HOH
3.470
N
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 PHE A:248 A:248 47.0 0.224 T -58.7 -27.5 47.0 0.224 0.0 HOH
3.496
CE2
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 PHE A:248 A:248 47.0 0.224 T -59.3 -27.0 47.0 0.224 0.0 HOH
3.616
N
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 PHE A:248 A:248 46.0 0.219 T -55.5 -24.6 46.0 0.219 0.0 HOH
3.636
CZ
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 PHE A:248 A:248 45.0 0.214 T -65.0 -26.6 45.0 0.214 0.0 HOH
3.545
N
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 PHE A:248 A:248 42.0 0.2 T -60.3 -24.8 42.0 0.2 0.0 HOH
3.480
N
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 PHE A:248 A:248 38.0 0.181 T -56.8 -20.6 38.0 0.181 0.0 HOH
4.568
CZ
O
PHE B:248 B:248 41.0 0.195 T -56.8 -20.6 41.0 0.195 0.0 HOH
4.568
CZ
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 PHE A:248 X:248 44.0 0.21 T -62.9 -24.3 44.0 0.21 0.0 HOH
3.687
N
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 PHE A:248 A:248 43.0 0.205 T -61.3 -25.2 43.0 0.205 0.0 HOH
3.590
CZ
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 PHE A:248 X:248 45.0 0.214 T -61.0 -24.1 45.0 0.214 0.0 HOH
3.618
CZ
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 PHE A:248 A:248 45.0 0.214 T -60.2 -27.1 45.0 0.214 0.0 HOH
3.685
N
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 PHE A:248 A:248 43.0 0.205 T -70.4 -22.8 43.0 0.205 0.0 HOH
3.640
N
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 PHE A:248 X:248 45.0 0.214 T -60.9 -26.4 45.0 0.214 0.0 HOH
3.647
N
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 PHE A:248 A:248 45.0 0.214 T -58.1 -28.7 45.0 0.214 0.0 HOH
3.616
N
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 PHE A:248 A:248 45.0 0.214 T -60.0 -26.9 45.0 0.214 0.0 HOH
3.524
N
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 PHE A:248 A:248 45.0 0.214 T -62.9 -25.1 45.0 0.214 0.0 HOH
3.512
CZ
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 PHE A:248 A:248 40.0 0.19 T -59.0 -21.4 40.0 0.19 0.0 HOH
3.237
CZ
O
PHE B:248 B:248 40.0 0.19 T -57.0 -25.0 NA NA NA
PHE C:248 C:248 38.0 0.181 T -61.8 -22.9 NA NA NA
PHE D:248 D:248 41.0 0.195 T -59.4 -25.9 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 PHE A:248 A:248 37.0 0.176 T -55.5 -25.2 37.0 0.176 0.0 HOH
3.426
CB
O
PHE C:248 C:248 38.0 0.181 T -60.2 -21.6 NA NA NA
PHE E:248 E:248 41.0 0.195 G -65.3 -29.9 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 PHE A:248 A:248 44.0 0.21 T -61.9 -26.3 6.0 0.029 0.181 C:None:0.181
HOH
3.497
N
O
PHE B:248 B:248 47.0 0.224 T -61.0 -29.7 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 PHE A:248 A:248 42.0 0.2 T -59.1 -26.7 42.0 0.2 0.0 HOH
2.988
N
H2
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 PHE A:248 A:248 42.0 0.2 T -66.4 -16.7 42.0 0.2 0.0 HOH
3.798
N
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 PHE A:248 A:248 40.0 0.19 T -59.8 -22.0 40.0 0.19 0.0 HOH
3.593
N
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 PHE A:248 A:248 44.0 0.21 T -63.8 -22.7 44.0 0.21 0.0 HOH
2.605
HB3
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 PHE A:248 A:248 42.0 0.2 T -66.4 -26.7 42.0 0.2 0.0 HOH
2.680
HB3
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 PHE A:248 A:248 45.0 0.214 T -60.4 -28.0 45.0 0.214 0.0 HOH
3.506
CB
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 PHE A:248 A:248 43.0 0.205 T -56.6 -29.0 43.0 0.205 0.0 HOH
3.549
CB
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 PHE A:248 A:248 45.0 0.214 T -60.1 -19.8 45.0 0.214 0.0 HOH
3.683
N
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 PHE A:248 A:248 39.0 0.186 T -65.2 -23.8 39.0 0.186 0.0 HOH
3.523
N
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 PHE A:248 A:248 43.0 0.205 T -59.2 -26.9 43.0 0.205 0.0 HOH
3.472
CE2
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 PHE A:248 P:248 38.0 0.181 T -62.8 -15.1 38.0 0.181 0.0 HOH
6.714
CZ
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 PHE A:248 A:248 47.0 0.224 T -59.3 -22.1 47.0 0.224 0.0 HOH
3.687
CB
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 PHE A:248 A:248 45.0 0.214 T -61.1 -30.9 45.0 0.214 0.0 HOH
3.489
N
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 PHE A:248 A:248 47.0 0.224 T -63.9 -25.0 47.0 0.224 0.0 HOH
3.461
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 PHE A:263 A:263 44.0 0.21 T -61.9 -25.6
af-p19961-f1 1 P19961 98.83 0.0 PHE A:263 A:263 43.0 0.205 T -64.1 -21.6
af-p0dte7-f1 1 P0DTE7 96.87 0.0 PHE A:263 A:263 40.0 0.19 T -63.4 -22.2
af-p0dte8-f1 1 P0DTE8 96.87 0.0 PHE A:263 A:263 40.0 0.19 T -64.2 -22.3
af-p0dub6-f1 1 P0DUB6 96.87 0.0 PHE A:263 A:263 40.0 0.19 T -64.3 -22.6