Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104166547 . T A CCDS783.1:NM_000699.2:c.1161atT>atA_NP_000690.1:p.387I>I Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 ILE A:372 A:372 63.0 0.36 B -113.2 125.6 63.0 0.36 0.0 HOH
4.107
CG2
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 ILE A:372 A:372 59.0 0.337 B -109.0 121.3 59.0 0.337 0.0 HOH
4.168
CG2
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 ILE A:372 A:372 61.0 0.349 B -110.5 129.6 61.0 0.349 0.0 HOH
3.042
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 ILE A:372 A:372 62.0 0.354 B -116.6 123.7 62.0 0.354 0.0 HOH
3.306
N
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 ILE A:372 A:372 61.0 0.349 B -106.1 121.5 61.0 0.349 0.0 HOH
3.014
N
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 ILE A:372 A:372 68.0 0.389 B -104.6 125.8 68.0 0.389 0.0 HOH
3.748
CG2
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 ILE A:372 A:372 63.0 0.36 B -108.6 128.5 63.0 0.36 0.0 HOH
3.832
CG2
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 ILE A:372 A:372 62.0 0.354 B -108.4 131.4 62.0 0.354 0.0 HOH
3.906
CG2
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 ILE A:372 A:372 60.0 0.343 B -106.9 127.3 60.0 0.343 0.0 HOH
3.828
CG2
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 ILE A:372 A:372 62.0 0.354 B -106.7 130.3 62.0 0.354 0.0 HOH
5.520
CG1
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 ILE A:372 A:372 63.0 0.36 B -99.6 119.8 63.0 0.36 0.0 HOH
2.908
N
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 ILE A:372 A:372 63.0 0.36 B -107.9 115.1 63.0 0.36 0.0 HOH
3.472
CG2
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 ILE A:372 A:372 60.0 0.343 B -102.2 123.2 60.0 0.343 0.0 HOH
3.733
CG2
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 ILE A:372 A:372 63.0 0.36 B -104.3 123.7 63.0 0.36 0.0 HOH
4.078
CG2
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 ILE A:372 A:372 63.0 0.36 E -104.7 124.6 63.0 0.36 0.0 HOH
2.701
N
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 ILE A:372 A:372 58.0 0.331 B -106.5 119.0 58.0 0.331 0.0 HOH
3.663
CG2
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 ILE A:372 A:372 63.0 0.36 B -107.9 125.1 63.0 0.36 0.0 B8D
HOH
9.286
3.825
CG2
CG2
C6
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 ILE A:372 A:372 62.0 0.354 B -106.3 127.5 62.0 0.354 0.0 HOH
3.013
N
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 ILE A:372 A:372 60.0 0.343 B -108.5 123.9 60.0 0.343 0.0 HOH
3.839
CG2
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 ILE A:372 A:372 62.0 0.354 E -112.6 123.4 62.0 0.354 0.0 0XR
HOH
2.867
2.539
N
O
O1'
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 ILE A:372 A:372 61.0 0.349 B -107.0 123.6 61.0 0.349 0.0 HOH
3.438
CG2
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 ILE A:372 A:372 63.0 0.36 B -108.8 123.1 63.0 0.36 0.0 HOH
2.746
O
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 ILE A:372 A:372 59.0 0.337 B -111.3 122.0 59.0 0.337 0.0 HOH
2.026
H
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 ILE A:372 A:372 64.0 0.366 B -109.0 124.9 64.0 0.366 0.0 HOH
2.162
H
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 ILE A:372 A:372 59.0 0.337 B -111.6 124.5 59.0 0.337 0.0 HOH
2.095
H
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 ILE A:372 A:372 63.0 0.36 B -103.0 119.0 63.0 0.36 0.0 HOH
3.978
CG2
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 ILE A:372 A:372 61.0 0.349 B -111.4 124.6 61.0 0.349 0.0 HOH
2.039
H
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 ILE A:372 A:372 56.0 0.32 B -110.0 125.8 56.0 0.32 0.0 HOH
8.846
CD1
O
ILE B:372 B:372 63.0 0.36 B -109.7 125.3 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 ILE A:372 A:372 62.0 0.354 B -111.0 123.2 62.0 0.354 0.0 HOH
2.089
H
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 ILE A:372 A:372 63.0 0.36 B -109.7 124.0 63.0 0.36 0.0 HOH
2.057
H
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 ILE A:372 A:372 60.0 0.343 B -103.7 127.9 60.0 0.343 0.0 GLC
HOH
9.609
3.188
CG2
N
C6
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 ILE A:372 A:372 59.0 0.337 B -107.9 121.4 59.0 0.337 0.0 GLC
HOH
9.557
2.851
CG2
N
C6
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 ILE A:372 A:372 61.0 0.349 B -108.1 122.1 61.0 0.349 0.0 HOH
3.939
CG2
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 ILE A:372 A:372 61.0 0.349 B -108.0 122.8 61.0 0.349 0.0 MPD
HOH
8.984
2.923
CG2
N
O2
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 ILE A:372 A:372 59.0 0.337 B -107.5 126.1 59.0 0.337 0.0 HOH
4.026
CG2
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 ILE A:372 A:372 65.0 0.371 B -100.6 122.7 65.0 0.371 0.0 HOH
2.834
N
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 ILE A:372 A:372 61.0 0.349 B -97.4 123.3 61.0 0.349 0.0 HOH
2.829
N
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 ILE A:372 A:372 62.0 0.354 E -106.9 121.8 62.0 0.354 0.0 HOH
2.937
CD1
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 ILE A:372 A:372 61.0 0.349 B -108.2 122.7 61.0 0.349 0.0 HOH
3.531
O
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 ILE A:372 A:372 65.0 0.371 B -102.4 127.1 65.0 0.371 0.0 HOH
3.758
CG2
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 ILE A:372 A:372 60.0 0.343 B -107.5 118.3 60.0 0.343 0.0 HOH
2.860
N
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 ILE A:372 A:372 63.0 0.36 B -102.5 118.4 63.0 0.36 0.0 HOH
4.976
CG1
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 ILE A:372 A:372 61.0 0.349 B -103.2 119.8 61.0 0.349 0.0 HOH
3.368
O
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 ILE A:372 A:372 63.0 0.36 B -110.2 122.3 63.0 0.36 0.0 HOH
2.057
H
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 ILE A:372 A:372 64.0 0.366 B -105.9 121.4 64.0 0.366 0.0 HOH
3.144
N
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ILE A:372 A:372 60.0 0.343 B -108.4 127.9 60.0 0.343 0.0 HOH
3.118
N
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ILE A:372 A:372 61.0 0.349 B -109.6 123.2 61.0 0.349 0.0 HOH
3.179
N
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 ILE A:372 A:372 63.0 0.36 B -111.6 118.3 63.0 0.36 0.0 HOH
4.137
CG2
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 ILE A:372 A:372 61.0 0.349 B -104.2 123.1 61.0 0.349 0.0 HOH
3.760
CG2
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 ILE A:372 A:372 63.0 0.36 B -107.5 124.1 63.0 0.36 0.0 HOH
4.357
CG2
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 ILE A:372 A:372 58.0 0.331 B -111.2 124.0 58.0 0.331 0.0 HOH
3.844
CG2
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 ILE A:372 A:372 61.0 0.349 B -113.5 110.9 61.0 0.349 0.0 HOH
3.000
N
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 ILE A:372 A:372 63.0 0.36 B -110.1 117.9 63.0 0.36 0.0 HOH
4.135
CG2
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 ILE A:372 A:372 63.0 0.36 B -107.5 132.3 63.0 0.36 0.0 HOH
4.031
CG2
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 ILE A:372 A:372 61.0 0.349 B -104.7 132.0 61.0 0.349 0.0 HOH
3.280
CG2
O
ILE B:372 B:372 61.0 0.349 B -104.7 132.0 61.0 0.349 0.0 HOH
3.279
CG2
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 ILE A:372 X:372 61.0 0.349 B -109.1 117.6 61.0 0.349 0.0 HOH
3.018
N
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 ILE A:372 A:372 61.0 0.349 B -109.6 124.0 61.0 0.349 0.0 HOH
2.863
N
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 ILE A:372 X:372 63.0 0.36 B -120.1 118.5 63.0 0.36 0.0 HOH
3.913
CG2
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 ILE A:372 A:372 64.0 0.366 B -106.7 119.2 64.0 0.366 0.0 HOH
2.820
N
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 ILE A:372 A:372 60.0 0.343 B -112.5 116.6 60.0 0.343 0.0 HOH
5.181
CG1
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 ILE A:372 X:372 63.0 0.36 B -109.5 119.2 63.0 0.36 0.0 HOH
2.870
N
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 ILE A:367 A:367 62.0 0.354 B -108.0 124.1 62.0 0.354 0.0 HOH
2.934
N
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 ILE A:367 A:367 61.0 0.349 B -112.1 121.1 61.0 0.349 0.0 AGL
HMC
HOH
9.424
8.713
2.947
CG2
CG2
N
C6
O4
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ILE A:372 A:372 61.0 0.349 B -108.1 123.0 61.0 0.349 0.0 HOH
2.905
N
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 ILE A:372 A:372 55.0 0.314 B -111.8 127.4 55.0 0.314 0.0 HOH
2.775
O
O
ILE B:372 B:372 60.0 0.343 B -108.5 123.0 NA NA NA
ILE C:372 C:372 60.0 0.343 B -110.8 130.6 NA NA NA
ILE D:372 D:372 64.0 0.366 B -114.6 126.7 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 ILE A:372 A:372 65.0 0.371 B -106.4 127.2 65.0 0.371 0.0 HOH
3.022
O
O
ILE C:372 C:372 65.0 0.371 B -102.6 131.5 NA NA NA
ILE E:372 E:372 63.0 0.36 B -111.4 126.5 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 ILE A:372 A:372 61.0 0.349 B -108.0 128.4 61.0 0.349 0.0 HOH
2.835
N
O
ILE B:372 B:372 63.0 0.36 B -108.8 124.3 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 ILE A:372 A:372 62.0 0.354 B -101.9 124.9 62.0 0.354 0.0 HOH
1.128
H
H2
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 ILE A:372 A:372 59.0 0.337 B -106.3 127.5 59.0 0.337 0.0 HOH
3.052
N
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 ILE A:372 A:372 61.0 0.349 B -109.1 128.6 61.0 0.349 0.0 HOH
2.921
N
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 ILE A:372 A:372 60.0 0.343 B -112.8 122.3 60.0 0.343 0.0 HOH
2.011
H
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 ILE A:372 A:372 63.0 0.36 B -108.5 124.8 63.0 0.36 0.0 HOH
1.849
H
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 ILE A:372 A:372 62.0 0.354 B -108.8 127.1 62.0 0.354 0.0 GLC
EDO
HOH
9.378
3.740
2.811
CG2
CG2
O
C6
O2
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 ILE A:372 A:372 63.0 0.36 B -111.3 124.9 63.0 0.36 0.0 GLC
HOH
9.288
2.967
CG2
N
C6
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 ILE A:372 A:372 60.0 0.343 B -103.8 130.5 60.0 0.343 0.0 HOH
2.943
N
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 ILE A:372 A:372 62.0 0.354 B -108.5 126.2 62.0 0.354 0.0 EDO
HOH
3.730
2.936
CG2
N
O2
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 ILE A:372 A:372 62.0 0.354 B -106.2 126.7 62.0 0.354 0.0 GLC
EDO
HOH
9.345
3.621
2.787
CG2
CG2
O
C6
O2
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 ILE A:372 P:372 57.0 0.326 E -80.4 132.0 57.0 0.326 0.0 HOH
4.506
CD1
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 ILE A:372 A:372 61.0 0.349 B -105.2 130.6 61.0 0.349 0.0 HOH
2.916
N
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 ILE A:372 A:372 62.0 0.354 B -107.4 128.6 62.0 0.354 0.0 GLC
HOH
9.180
3.029
CG2
N
C6
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 ILE A:372 A:372 62.0 0.354 B -107.5 126.5 62.0 0.354 0.0 HOH
4.140
CG2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 ILE A:387 A:387 59.0 0.337 B -108.4 121.2
af-p19961-f1 1 P19961 98.83 0.0 ILE A:387 A:387 59.0 0.337 B -107.1 122.3
af-p0dte7-f1 1 P0DTE7 96.87 0.0 ILE A:387 A:387 61.0 0.349 B -108.3 122.3
af-p0dte8-f1 1 P0DTE8 96.87 0.0 ILE A:387 A:387 62.0 0.354 B -108.2 122.8
af-p0dub6-f1 1 P0DUB6 96.87 0.0 ILE A:387 A:387 59.0 0.337 B -108.9 122.0