Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104166574 . C A CCDS783.1:NM_000699.2:c.1188gaC>gaA_NP_000690.1:p.396D>E Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 ASP A:381 A:381 92.0 0.613 T 72.8 7.9 92.0 0.613 0.0 HOH
5.085
OD2
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 ASP A:381 A:381 81.0 0.54 T 79.3 10.2 81.0 0.54 0.0 HOH
3.231
OD2
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 ASP A:381 A:381 87.0 0.58 T 77.1 8.5 87.0 0.58 0.0 HOH
3.375
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 ASP A:381 A:381 94.0 0.627 T 74.8 9.5 94.0 0.627 0.0 HOH
2.679
OD2
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 ASP A:381 A:381 85.0 0.567 T 76.0 11.9 85.0 0.567 0.0 HOH
3.312
N
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 ASP A:381 A:381 87.0 0.58 T 68.4 14.1 87.0 0.58 0.0 HOH
5.279
OD2
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 ASP A:381 A:381 84.0 0.56 T 69.0 13.7 84.0 0.56 0.0 HOH
3.567
CA
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:381 A:381 85.0 0.567 T 74.7 16.1 85.0 0.567 0.0 HOH
6.512
O
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:381 A:381 85.0 0.567 T 72.0 17.0 85.0 0.567 0.0 HOH
5.195
OD2
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:381 A:381 83.0 0.553 T 74.7 10.3 83.0 0.553 0.0 HOH
5.500
OD2
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 ASP A:381 A:381 78.0 0.52 T 79.1 11.3 78.0 0.52 0.0 HOH
3.338
N
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:381 A:381 87.0 0.58 T 75.7 15.9 87.0 0.58 0.0 HOH
4.100
C
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:381 A:381 79.0 0.527 T 76.6 13.0 79.0 0.527 0.0 HOH
3.072
N
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:381 A:381 83.0 0.553 T 76.4 12.6 83.0 0.553 0.0 HOH
2.848
OD2
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:381 A:381 82.0 0.547 T 71.4 16.5 82.0 0.547 0.0 HOH
3.383
OD2
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 ASP A:381 A:381 86.0 0.573 T 67.8 19.4 86.0 0.573 0.0 HOH
2.587
OD2
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 ASP A:381 A:381 79.0 0.527 T 75.2 11.8 79.0 0.527 0.0 GLF
HOH
9.374
2.612
C
OD2
O6
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 ASP A:381 A:381 84.0 0.56 T 74.6 13.1 84.0 0.56 0.0 HOH
2.642
OD2
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 ASP A:381 A:381 85.0 0.567 T 75.3 11.8 85.0 0.567 0.0 HOH
2.744
OD2
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 ASP A:381 A:381 51.0 0.34 T 74.0 12.4 51.0 0.34 0.0 HOH
2.405
O
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 ASP A:381 A:381 77.0 0.513 T 69.7 16.8 77.0 0.513 0.0 HOH
2.752
OD2
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 ASP A:381 A:381 81.0 0.54 T 64.6 19.2 81.0 0.54 0.0 HOH
2.894
OD2
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 ASP A:381 A:381 82.0 0.547 T 72.0 12.8 82.0 0.547 0.0 HOH
2.517
OD2
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 ASP A:381 A:381 84.0 0.56 T 73.1 11.1 84.0 0.56 0.0 HOH
2.790
H
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 ASP A:381 A:381 76.0 0.507 T 71.3 12.5 76.0 0.507 0.0 HOH
2.004
H
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 ASP A:381 A:381 89.0 0.593 T 68.9 18.2 89.0 0.593 0.0 HOH
3.265
N
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 ASP A:381 A:381 82.0 0.547 T 71.8 12.7 82.0 0.547 0.0 HOH
2.057
H
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 ASP A:381 A:381 81.0 0.54 T 66.7 17.3 81.0 0.54 0.0 HOH
6.267
O
O
ASP B:381 B:381 65.0 0.433 T 67.4 15.9 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 ASP A:381 A:381 82.0 0.547 T 73.7 11.6 82.0 0.547 0.0 HOH
2.204
H
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 ASP A:381 A:381 81.0 0.54 T 72.8 12.3 81.0 0.54 0.0 HOH
2.128
H
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:381 A:381 79.0 0.527 T 76.2 13.0 79.0 0.527 0.0 BGC
GLC
HOH
9.420
9.616
2.611
O
C
OD2
O6
O6
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:381 A:381 80.0 0.533 T 69.7 12.7 80.0 0.533 0.0 BGC
GLC
HOH
9.431
9.573
3.493
OD1
C
N
O6
O6
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:381 A:381 72.0 0.48 T 73.8 11.0 72.0 0.48 0.0 GLC
HOH
9.438
3.331
C
CA
O6
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 ASP A:381 A:381 99.0 0.66 T 67.4 19.3 99.0 0.66 0.0 BGC
HOH
9.466
2.849
C
N
O6
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 ASP A:381 A:381 91.0 0.607 T 71.4 15.8 91.0 0.607 0.0 HOH
5.416
OD1
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:381 A:381 82.0 0.547 T 73.2 13.7 82.0 0.547 0.0 HOH
2.814
OD2
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:381 A:381 82.0 0.547 T 74.2 14.5 82.0 0.547 0.0 HOH
3.401
CA
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:381 A:381 82.0 0.547 T 78.7 12.3 82.0 0.547 0.0 HOH
3.174
OD2
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 ASP A:381 A:381 82.0 0.547 T 75.3 17.5 82.0 0.547 0.0 HOH
2.732
OD2
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 ASP A:381 A:381 84.0 0.56 T 74.4 8.9 84.0 0.56 0.0 HOH
4.926
N
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 ASP A:381 A:381 91.0 0.607 T 69.0 18.5 91.0 0.607 0.0 HOH
2.558
OD2
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 ASP A:381 A:381 81.0 0.54 T 76.0 9.0 81.0 0.54 0.0 HOH
2.505
OD2
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 ASP A:381 A:381 85.0 0.567 T 84.7 2.9 85.0 0.567 0.0 HOH
3.514
OD1
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 ASP A:381 A:381 82.0 0.547 T 72.6 13.5 82.0 0.547 0.0 HOH
2.579
H
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 ASP A:381 A:381 94.0 0.627 T 80.0 10.2 94.0 0.627 0.0 HOH
3.587
N
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ASP A:381 A:381 81.0 0.54 T 82.9 4.7 81.0 0.54 0.0 HOH
3.523
CA
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 ASP A:381 A:381 98.0 0.653 T 79.2 10.6 98.0 0.653 0.0 HOH
3.867
N
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 ASP A:381 A:381 91.0 0.607 T 74.8 12.9 91.0 0.607 0.0 HOH
5.299
N
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 ASP A:381 A:381 84.0 0.56 T 81.4 6.5 84.0 0.56 0.0 HOH
3.082
N
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 ASP A:381 A:381 89.0 0.593 T 74.6 11.8 89.0 0.593 0.0 HOH
3.460
N
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 ASP A:381 A:381 85.0 0.567 T 72.7 12.8 85.0 0.567 0.0 HOH
5.340
OD2
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 ASP A:381 A:381 85.0 0.567 T 68.3 13.3 85.0 0.567 0.0 HOH
3.228
N
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 ASP A:381 A:381 95.0 0.633 T 72.6 9.4 95.0 0.633 0.0 HOH
3.170
N
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 ASP A:381 A:381 96.0 0.64 T 72.3 15.9 96.0 0.64 0.0 HOH
3.132
OD2
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 ASP A:381 A:381 77.0 0.513 T 79.6 21.1 77.0 0.513 0.0 HOH
6.299
O
O
ASP B:381 B:381 78.0 0.52 T 79.7 21.0 78.0 0.52 0.0 HOH
6.297
O
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 ASP A:381 X:381 82.0 0.547 T 71.9 10.8 82.0 0.547 0.0 HOH
3.005
N
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 ASP A:381 A:381 89.0 0.593 T 66.7 19.7 89.0 0.593 0.0 HOH
5.205
N
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 ASP A:381 X:381 88.0 0.587 T 65.0 16.6 88.0 0.587 0.0 HOH
3.014
OD2
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 ASP A:381 A:381 89.0 0.593 T 72.0 9.5 89.0 0.593 0.0 HOH
3.341
N
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 ASP A:381 A:381 89.0 0.593 T 78.8 10.0 89.0 0.593 0.0 HOH
5.540
OD2
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 ASP A:381 X:381 84.0 0.56 T 75.3 6.9 84.0 0.56 0.0 HOH
2.813
OD2
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 ASP A:376 A:376 88.0 0.587 T 69.9 15.3 88.0 0.587 0.0 HOH
3.453
N
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 ASP A:376 A:376 95.0 0.633 T 72.4 10.6 95.0 0.633 0.0 GLC
GLC
HOH
9.217
9.515
3.186
OD1
C
N
O6
O6
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 ASP A:381 A:381 85.0 0.567 T 73.9 12.2 85.0 0.567 0.0 HOH
2.823
OD2
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 ASP A:381 A:381 66.0 0.44 T 70.4 11.4 66.0 0.44 0.0 HOH
2.704
OD2
O
ASP B:381 B:381 69.0 0.46 T 70.0 12.6 NA NA NA
ASP C:381 C:381 68.0 0.453 T 69.6 10.4 NA NA NA
ASP D:381 D:381 72.0 0.48 T 70.0 11.2 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 ASP A:381 A:381 68.0 0.453 T 74.3 8.6 68.0 0.453 0.0 HOH
3.125
OD1
O
ASP C:381 C:381 68.0 0.453 T 67.7 11.6 NA NA NA
ASP E:381 E:381 69.0 0.46 T 59.9 14.9 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 ASP A:381 A:381 89.0 0.593 T 77.5 4.1 89.0 0.593 0.0 HOH
2.552
OD1
O
ASP B:381 B:381 91.0 0.607 T 73.9 4.0 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 ASP A:381 A:381 84.0 0.56 T 70.9 14.0 84.0 0.56 0.0 HOH
1.618
H
H1
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 ASP A:381 A:381 82.0 0.547 T 57.3 19.3 82.0 0.547 0.0 HOH
2.808
OD2
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 ASP A:381 A:381 79.0 0.527 T 66.5 25.2 79.0 0.527 0.0 HOH
2.512
OD1
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 ASP A:381 A:381 81.0 0.54 T 72.0 16.4 81.0 0.54 0.0 HOH
2.753
H
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 ASP A:381 A:381 79.0 0.527 T 66.3 16.2 79.0 0.527 0.0 HOH
2.731
HA
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 ASP A:381 A:381 86.0 0.573 T 69.4 18.1 86.0 0.573 0.0 GLC
HOH
9.642
2.564
C
OD2
O6
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 ASP A:381 A:381 81.0 0.54 T 67.5 20.6 81.0 0.54 0.0 MA1
HOH
9.477
2.605
C
OD2
O6
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 ASP A:381 A:381 81.0 0.54 T 71.8 18.6 81.0 0.54 0.0 HOH
3.307
OD2
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 ASP A:381 A:381 84.0 0.56 T 71.9 16.2 84.0 0.56 0.0 EDO
HOH
3.337
3.365
OD2
N
O1
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 ASP A:381 A:381 87.0 0.58 T 69.4 19.2 87.0 0.58 0.0 BGC
HOH
9.681
2.580
C
OD2
O6
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 ASP A:381 P:381 63.0 0.42 T 74.0 16.4 63.0 0.42 0.0 HOH
2.814
OD2
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 ASP A:381 A:381 88.0 0.587 T 70.2 24.6 88.0 0.587 0.0 HOH
2.493
O
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 ASP A:381 A:381 89.0 0.593 T 69.6 14.9 89.0 0.593 0.0 HOH
2.768
OD2
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 ASP A:381 A:381 76.0 0.507 T 70.9 15.5 76.0 0.507 0.0 HOH
5.085
N
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 ASP A:396 A:396 84.0 0.56 T 64.9 6.5
af-p19961-f1 1 P19961 98.83 0.0 ASP A:396 A:396 78.0 0.52 T 64.4 1.6
af-p0dte7-f1 1 P0DTE7 96.87 0.0 ASP A:396 A:396 86.0 0.573 T 62.7 2.6
af-p0dte8-f1 1 P0DTE8 96.87 0.0 ASP A:396 A:396 84.0 0.56 T 62.6 1.8
af-p0dub6-f1 1 P0DUB6 96.87 0.0 ASP A:396 A:396 86.0 0.573 T 62.9 0.6