Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104166755 . C A CCDS783.1:NM_000699.2:c.1258Cct>Act_NP_000690.1:p.420P>T Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1b2y 1 P04746 100.0 0.0 X-RAY
2000-02-16 PRO A:405 A:405 76.0 0.524 -80.7 153.9 76.0 0.524 0.0 HOH
3.789
CA
O
1bsi 1 P04746 99.8 0.0 X-RAY
1999-05-18 PRO A:405 A:405 78.0 0.538 -71.3 159.9 78.0 0.538 0.0 HOH
6.123
O
O
1cpu 1 P04746 99.8 0.0 X-RAY
1999-06-14 PRO A:405 A:405 76.0 0.524 -75.6 161.4 76.0 0.524 0.0 HOH
3.562
N
O
1hny 1 P04746 99.8 0.0 X-RAY
1996-03-08 PRO A:405 A:405 77.0 0.531 -82.1 155.5 77.0 0.531 0.0 HOH
3.461
CA
O
1u2y 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:405 A:405 76.0 0.524 -73.8 156.9 76.0 0.524 0.0 HOH
4.863
CD
O
1u30 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:405 A:405 77.0 0.531 -73.0 168.6 77.0 0.531 0.0 HOH
3.680
CA
O
1u33 1 P04746 99.8 0.0 X-RAY
2004-09-07 PRO A:405 A:405 73.0 0.503 -76.1 159.2 73.0 0.503 0.0 HOH
3.457
CA
O
1xcw 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:405 A:405 75.0 0.517 -72.6 163.4 75.0 0.517 0.0 HOH
3.477
N
O
1xcx 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:405 A:405 74.0 0.51 -76.1 157.1 74.0 0.51 0.0 HOH
8.048
O
O
1xd0 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:405 A:405 75.0 0.517 -73.4 159.6 75.0 0.517 0.0 HOH
3.644
CA
O
1xd1 1 P04746 99.8 0.0 X-RAY
2004-12-07 PRO A:405 A:405 77.0 0.531 -73.4 163.8 77.0 0.531 0.0 HOH
3.630
CA
O
2qmk 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:405 A:405 73.0 0.503 -74.5 168.4 73.0 0.503 0.0 HOH
3.417
N
O
2qv4 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:405 A:405 81.0 0.559 -74.7 153.2 81.0 0.559 0.0 HOH
3.738
N
O
3bai 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:405 A:405 82.0 0.566 -68.5 151.8 82.0 0.566 0.0 HOH
3.734
CA
O
3baj 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:405 A:405 77.0 0.531 -70.9 157.1 77.0 0.531 0.0 HOH
3.513
N
O
3baw 1 P04746 99.8 0.0 X-RAY
2008-03-25 PRO A:405 A:405 76.0 0.524 -77.7 155.2 76.0 0.524 0.0 HOH
3.637
CG
O
3ij7 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:405 A:405 75.0 0.517 -74.5 155.2 75.0 0.517 0.0 HOH
5.807
O
O
3ij8 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:405 A:405 82.0 0.566 -76.0 152.3 82.0 0.566 0.0 HOH
3.545
N
O
3ij9 1 P04746 99.8 0.0 X-RAY
2009-10-27 PRO A:405 A:405 74.0 0.51 -79.2 157.0 74.0 0.51 0.0 HOH
5.959
O
O
4gqq 1 P04746 99.8 0.0 X-RAY
2012-10-24 PRO A:405 A:405 77.0 0.531 -69.8 152.6 77.0 0.531 0.0 HOH
4.248
CB
O
4gqr 1 P04746 99.8 0.0 X-RAY
2012-10-24 PRO A:405 A:405 77.0 0.531 -73.3 152.2 77.0 0.531 0.0 HOH
3.379
N
O
4w93 1 P04746 99.8 0.0 X-RAY
2015-07-15 PRO A:405 A:405 80.0 0.552 -75.2 145.7 80.0 0.552 0.0 HOH
3.562
CA
O
4x9y 1 P04746 99.8 0.0 X-RAY
2014-12-31 PRO A:405 A:405 80.0 0.552 -76.7 152.3 80.0 0.552 0.0 HOH
2.736
HA
O
5e0f 1 P04746 99.8 0.0 X-RAY
2016-09-07 PRO A:405 A:405 81.0 0.559 -74.6 143.8 81.0 0.559 0.0 HOH
2.805
HA
O
5emy 1 P04746 99.8 0.0 X-RAY
2016-07-06 PRO A:405 A:405 79.0 0.545 -75.8 152.3 79.0 0.545 0.0 HOH
2.744
HA
O
5kez 1 P04746 99.8 0.0 X-RAY
2017-03-29 PRO A:405 A:405 80.0 0.552 -75.7 146.1 80.0 0.552 0.0 HOH
3.543
CA
O
5u3a 1 P04746 99.8 0.0 X-RAY
2017-12-06 PRO A:405 A:405 80.0 0.552 -76.3 152.6 80.0 0.552 0.0 HOH
2.760
HD3
O
5va9 1 P04746 99.8 0.0 X-RAY
2018-03-28 PRO A:405 A:405 84.0 0.579 -73.5 146.4 84.0 0.579 0.0 HOH
6.127
O
O
PRO B:405 B:405 83.0 0.572 -72.2 146.5 NA NA NA
6obx 1 P04746 99.8 0.0 X-RAY
2020-02-12 PRO A:405 A:405 80.0 0.552 -75.8 153.3 80.0 0.552 0.0 HOH
2.739
HD3
O
6ocn 1 P04746 99.8 0.0 X-RAY
2020-02-12 PRO A:405 A:405 80.0 0.552 -76.4 152.9 80.0 0.552 0.0 HOH
2.750
HA
O
3old 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:405 A:405 80.0 0.552 -74.7 155.1 80.0 0.552 0.0 HOH
3.381
CA
O
3ole 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:405 A:405 82.0 0.566 -74.2 153.8 82.0 0.566 0.0 HOH
3.384
N
O
3olg 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:405 A:405 80.0 0.552 -77.2 149.2 80.0 0.552 0.0 HOH
5.992
O
O
3oli 1 P04746 99.8 0.0 X-RAY
2011-04-13 PRO A:405 A:405 81.0 0.559 -74.0 146.9 81.0 0.559 0.0 HOH
3.197
N
O
1kgw 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:405 A:405 74.0 0.51 -75.2 151.7 74.0 0.51 0.0 HOH
6.323
N
O
1xgz 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:405 A:405 75.0 0.517 -70.7 159.5 75.0 0.517 0.0 HOH
3.761
N
O
1xh0 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:405 A:405 76.0 0.524 -72.8 159.2 76.0 0.524 0.0 HOH
3.283
CG
O
1xh1 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:405 A:405 77.0 0.531 -74.7 159.0 77.0 0.531 0.0 HOH
3.666
CA
O
1xh2 1 P04746 99.6 0.0 X-RAY
2005-05-24 PRO A:405 A:405 77.0 0.531 -73.3 169.9 77.0 0.531 0.0 HOH
3.516
C
O
3bak 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:405 A:405 79.0 0.545 -70.5 160.0 79.0 0.545 0.0 HOH
3.518
CA
O
3bax 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:405 A:405 80.0 0.552 -75.2 156.0 80.0 0.552 0.0 HOH
3.490
N
O
3bay 1 P04746 99.6 0.0 X-RAY
2008-03-25 PRO A:405 A:405 75.0 0.517 -69.4 169.3 75.0 0.517 0.0 HOH
5.967
O
O
1kgx 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:405 A:405 77.0 0.531 -73.1 166.6 77.0 0.531 0.0 HOH
3.771
CA
O
6z8l 1 P04746 99.6 0.0 X-RAY
2020-12-02 PRO A:405 A:405 82.0 0.566 -77.9 147.1 82.0 0.566 0.0 HOH
2.745
HA
O
1kgu 1 P04746 99.6 0.0 X-RAY
2002-01-16 PRO A:405 A:405 76.0 0.524 -80.5 154.5 76.0 0.524 0.0 HOH
3.678
CA
O
2cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PRO A:405 A:405 76.0 0.524 -71.6 162.0 76.0 0.524 0.0 HOH
3.624
CA
O
3cpu 1 P04746 99.6 0.0 X-RAY
2001-06-30 PRO A:405 A:405 74.0 0.51 -72.1 148.2 74.0 0.51 0.0 HOH
3.597
CB
O
5td4 1 P04746 99.6 0.0 X-RAY
2016-11-02 PRO A:405 A:405 83.0 0.572 -71.8 147.0 83.0 0.572 0.0 HOH
3.618
CA
O
1kb3 1 P04746 99.6 0.0 X-RAY
2002-05-01 PRO A:405 A:405 76.0 0.524 -74.4 161.9 76.0 0.524 0.0 HOH
6.101
O
O
1kbb 1 P04746 99.6 0.0 X-RAY
2002-04-10 PRO A:405 A:405 77.0 0.531 -78.4 151.5 77.0 0.531 0.0 HOH
6.069
O
O
1kbk 1 P04746 99.6 0.0 X-RAY
2002-04-10 PRO A:405 A:405 82.0 0.566 -73.2 161.8 82.0 0.566 0.0 HOH
8.295
O
O
1c8q 1 P04745 96.98 0.0 X-RAY
2001-06-13 PRO A:405 A:405 73.0 0.503 -81.8 146.6 73.0 0.503 0.0 HOH
3.563
CA
O
1mfv 1 P04745 96.98 0.0 X-RAY
2002-11-20 PRO A:405 A:405 77.0 0.531 -72.4 149.0 77.0 0.531 0.0 HOH
3.449
CA
O
1smd 1 P04745 96.98 0.0 X-RAY
1996-07-11 PRO A:405 A:405 76.0 0.524 -69.7 164.8 76.0 0.524 0.0 HOH
7.885
N
O
1xv8 1 P04745 96.98 0.0 X-RAY
2005-10-11 PRO A:405 A:405 81.0 0.559 -74.7 157.2 81.0 0.559 0.0 HOH
6.585
CD
O
PRO B:405 B:405 82.0 0.566 -74.8 157.2 82.0 0.566 0.0 HOH
6.585
CD
O
1z32 1 P04745 96.77 0.0 X-RAY
2005-05-31 PRO A:405 X:405 82.0 0.566 -73.0 144.9 82.0 0.566 0.0 HOH
3.598
CA
O
1jxj 1 P04745 96.77 0.0 X-RAY
2001-09-14 PRO A:405 A:405 81.0 0.559 -77.2 148.5 81.0 0.559 0.0 HOH
3.465
CA
O
1q4n 1 P04745 96.77 0.0 X-RAY
2004-03-16 PRO A:405 X:405 76.0 0.524 -77.2 144.3 76.0 0.524 0.0 HOH
3.434
CA
O
1nm9 1 P04745 96.77 0.0 X-RAY
2004-01-20 PRO A:405 A:405 83.0 0.572 -74.6 140.7 83.0 0.572 0.0 HOH
3.473
CA
O
3blk 1 P04745 96.77 0.0 X-RAY
2008-11-25 PRO A:405 A:405 78.0 0.538 -71.4 149.3 78.0 0.538 0.0 HOH
3.684
CA
O
3blp 1 P04745 96.77 0.0 X-RAY
2008-11-18 PRO A:405 X:405 76.0 0.524 -74.4 149.8 76.0 0.524 0.0 HOH
3.643
CA
O
1jxk 1 P04745 95.97 0.0 X-RAY
2001-09-14 PRO A:400 A:400 74.0 0.51 -77.1 151.5 74.0 0.51 0.0 HOH
3.432
CA
O
1mfu 1 P04745 95.97 0.0 X-RAY
2002-11-20 PRO A:400 A:400 83.0 0.572 -73.4 144.9 83.0 0.572 0.0 HOH
3.441
CA
O
3dhp 1 P04745 95.77 0.0 X-RAY
2008-07-01 PRO A:405 A:405 81.0 0.559 -78.9 149.9 81.0 0.559 0.0 HOH
3.315
N
O
1kxq 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:405 A:405 81.0 0.559 -77.7 157.8 81.0 0.559 0.0 HOH
3.629
CA
O
PRO B:405 B:405 82.0 0.566 -75.1 149.5 NA NA NA
PRO C:405 C:405 82.0 0.566 -74.8 152.0 NA NA NA
PRO D:405 D:405 82.0 0.566 -78.9 152.2 NA NA NA
1kxt 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:405 A:405 85.0 0.586 -76.3 145.3 85.0 0.586 0.0 HOH
3.511
CA
O
PRO C:405 C:405 84.0 0.579 -73.6 155.2 NA NA NA
PRO E:405 E:405 87.0 0.6 -73.9 144.5 NA NA NA
1kxv 1 P00690 86.9 0.0 X-RAY
2002-06-19 PRO A:405 A:405 81.0 0.559 -73.2 152.2 81.0 0.559 0.0 HOH
3.601
CA
O
PRO B:405 B:405 83.0 0.572 -73.5 150.3 NA NA NA
1dhk 1 P00690 86.9 0.0 X-RAY
1997-12-24 PRO A:405 A:405 84.0 0.579 -70.8 155.2 84.0 0.579 0.0 HOH
3.404
CA
O
1ppi 1 P00690 86.9 0.0 X-RAY
1995-05-24 PRO A:405 A:405 84.0 0.579 -72.3 147.4 84.0 0.579 0.0 HOH
3.466
CA
O
1vah 1 P00690 86.69 0.0 X-RAY
2005-04-26 PRO A:405 A:405 84.0 0.579 -81.5 159.8 84.0 0.579 0.0 HOH
3.526
CA
O
3l2l 1 P00690 86.69 0.0 X-RAY
2010-04-14 PRO A:405 A:405 82.0 0.566 -72.0 155.1 82.0 0.566 0.0 HOH
2.761
HA
O
3l2m 1 P00690 86.69 0.0 X-RAY
2010-04-14 PRO A:405 A:405 81.0 0.559 -71.9 152.0 81.0 0.559 0.0 HOH
2.787
HA
O
1ua3 1 P00690 86.69 0.0 X-RAY
2003-10-14 PRO A:405 A:405 81.0 0.559 -75.0 147.8 81.0 0.559 0.0 HOH
3.359
N
O
1jfh 1 P00690 86.69 0.0 X-RAY
1998-12-02 PRO A:405 A:405 83.0 0.572 -71.7 151.1 83.0 0.572 0.0 HOH
3.654
CA
O
1ose 1 P00690 86.49 0.0 X-RAY
1997-04-01 PRO A:405 A:405 83.0 0.572 -77.5 153.7 83.0 0.572 0.0 HOH
3.611
CA
O
1hx0 1 P00690 86.49 0.0 X-RAY
2001-08-08 PRO A:405 A:405 83.0 0.572 -77.6 152.7 83.0 0.572 0.0 HOH
3.402
N
O
1wo2 1 P00690 86.49 0.0 X-RAY
2005-03-15 PRO A:405 A:405 84.0 0.579 -77.0 155.5 84.0 0.579 0.0 HOH
3.359
N
O
1bvn 1 P00690 86.49 0.0 X-RAY
1998-09-23 PRO A:405 P:405 80.0 0.552 -76.7 153.5 80.0 0.552 0.0 HOH
5.700
O
O
1pif 1 P00690 86.29 0.0 X-RAY
1996-12-07 PRO A:405 A:405 84.0 0.579 -75.5 158.9 84.0 0.579 0.0 HOH
3.470
CA
O
1pig 1 P00690 86.29 0.0 X-RAY
1996-12-07 PRO A:405 A:405 82.0 0.566 -73.5 152.5 82.0 0.566 0.0 HOH
3.981
CA
O
4x0n 1 P00690 86.29 0.0 X-RAY
2015-11-25 PRO A:405 A:405 83.0 0.572 -77.2 151.7 83.0 0.572 0.0 HOH
5.851
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p04746-f1 1 P04746 100.0 0.0 PRO A:420 A:420 78.0 0.538 -71.2 158.0
af-p19961-f1 1 P19961 98.83 0.0 PRO A:420 A:420 83.0 0.572 -71.7 152.6
af-p0dte7-f1 1 P0DTE7 96.87 0.0 PRO A:420 A:420 83.0 0.572 -71.9 152.2
af-p0dte8-f1 1 P0DTE8 96.87 0.0 PRO A:420 A:420 82.0 0.566 -72.2 152.2
af-p0dub6-f1 1 P0DUB6 96.87 0.0 PRO A:420 A:420 75.0 0.517 -70.2 155.2