Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104203288 . A C CCDS30782.1:NM_001008221.1:c.1091gAa>gCa_NP_001008222.1:p.364E>A Homo sapiens amylase, alpha 1A (salivary) (AMY1A), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1c8q 1 P04745 99.8 0.0 X-RAY
2001-06-13 GLU A:349 A:349 133.0 0.7 S -135.4 52.3 133.0 0.7 0.0 HOH
5.400
O
O
1mfv 1 P04745 99.8 0.0 X-RAY
2002-11-20 GLU A:349 A:349 121.0 0.637 E -124.7 115.6 121.0 0.637 0.0 HOH
2.803
OE1
O
1smd 1 P04745 99.8 0.0 X-RAY
1996-07-11 GLU A:349 A:349 124.0 0.653 S -101.6 61.7 124.0 0.653 0.0 HOH
3.236
O
O
1xv8 1 P04745 99.8 0.0 X-RAY
2005-10-11 GLU A:349 A:349 96.0 0.505 E -146.4 116.0 96.0 0.505 0.0
GLU B:349 B:349 92.0 0.484 E -146.4 116.0 92.0 0.484 0.0
1q4n 1 P04745 99.6 0.0 X-RAY
2004-03-16 GLU A:349 X:349 119.0 0.626 E -151.8 120.5 119.0 0.626 0.0 HOH
3.682
N
O
1z32 1 P04745 99.6 0.0 X-RAY
2005-05-31 GLU A:349 X:349 115.0 0.605 E -132.3 120.9 115.0 0.605 0.0 HOH
2.564
OE1
O
1jxj 1 P04745 99.6 0.0 X-RAY
2001-09-14 GLU A:349 A:349 108.0 0.568 E -124.4 104.8 108.0 0.568 0.0 HOH
2.625
OE2
O
1nm9 1 P04745 99.6 0.0 X-RAY
2004-01-20 GLU A:349 A:349 117.0 0.616 E -130.6 108.0 117.0 0.616 0.0 HOH
9.469
N
O
3blk 1 P04745 99.6 0.0 X-RAY
2008-11-25 GLU A:349 A:349 122.0 0.642 S -150.0 117.8 122.0 0.642 0.0 HOH
9.439
N
O
3blp 1 P04745 99.6 0.0 X-RAY
2008-11-18 GLU A:349 X:349 111.0 0.584 E -140.9 119.2 111.0 0.584 0.0 HOH
2.789
OE1
O
1jxk 1 P04745 98.79 0.0 X-RAY
2001-09-14 GLU A:344 A:344 138.0 0.726 S -119.2 61.8 138.0 0.726 0.0 HOH
3.250
OE2
O
1mfu 1 P04745 98.79 0.0 X-RAY
2002-11-20 GLU A:344 A:344 109.0 0.574 E -132.6 126.7 109.0 0.574 0.0 HOH
2.409
OE2
O
3dhp 1 P04745 98.59 0.0 X-RAY
2008-07-01 GLU A:349 A:349 101.0 0.532 E -149.1 134.5 101.0 0.532 0.0 HOH
3.437
C
O
3old 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLN A:349 A:349 97.0 0.539 E -134.6 115.3 97.0 0.539 0.0 HOH
2.461
O
O
3ole 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLN A:349 A:349 97.0 0.539 E -132.5 117.0 97.0 0.539 0.0 HOH
2.642
O
O
3olg 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLN A:349 A:349 102.0 0.567 E -127.0 116.6 102.0 0.567 0.0 HOH
4.590
CG
O
3oli 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLN A:349 A:349 105.0 0.583 E -130.1 106.1 105.0 0.583 0.0 HOH
3.651
C
O
6z8l 1 P04746 97.18 0.0 X-RAY
2020-12-02 GLN A:349 A:349 110.0 0.611 E -124.8 130.9 110.0 0.611 0.0 GLC
HOH
9.085
1.891
HE22
HE22
O6
O
1b2y 1 P04746 97.18 0.0 X-RAY
2000-02-16 GLN A:349 A:349 125.0 0.694 E -139.6 113.2 125.0 0.694 0.0 HOH
2.952
NE2
O
1bsi 1 P04746 96.98 0.0 X-RAY
1999-05-18 GLN A:349 A:349 91.0 0.506 E -121.5 121.5 91.0 0.506 0.0 HOH
6.127
OE1
O
1cpu 1 P04746 96.98 0.0 X-RAY
1999-06-14 GLN A:349 A:349 100.0 0.556 E -123.1 118.7 100.0 0.556 0.0 HOH
8.442
OE1
O
1hny 1 P04746 96.98 0.0 X-RAY
1996-03-08 GLN A:349 A:349 124.0 0.689 E -134.5 112.5 124.0 0.689 0.0 HOH
3.113
O
O
1u2y 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLN A:349 A:349 97.0 0.539 E -141.1 115.7 97.0 0.539 0.0 HOH
2.744
O
O
1u30 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLN A:349 A:349 105.0 0.583 E -124.5 113.8 105.0 0.583 0.0 HOH
6.516
C
O
1u33 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLN A:349 A:349 95.0 0.528 E -140.7 117.5 95.0 0.528 0.0 HOH
6.094
N
O
1xcw 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLN A:349 A:349 98.0 0.544 E -134.7 121.0 98.0 0.544 0.0 HOH
2.838
O
O
1xcx 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLN A:349 A:349 99.0 0.55 E -143.3 116.4 99.0 0.55 0.0 HOH
2.637
O
O
1xd0 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLN A:349 A:349 96.0 0.533 E -140.3 115.9 96.0 0.533 0.0 HOH
6.543
C
O
1xd1 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLN A:349 A:349 99.0 0.55 E -122.4 116.7 99.0 0.55 0.0 HOH
6.303
NE2
O
2qmk 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLN A:349 A:349 88.0 0.489 E -146.7 128.0 88.0 0.489 0.0 HOH
3.308
N
O
2qv4 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLN A:349 A:349 94.0 0.522 E -154.4 125.3 94.0 0.522 0.0 HOH
3.497
N
O
3bai 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLN A:349 A:349 103.0 0.572 E -139.3 117.0 103.0 0.572 0.0 HOH
3.724
C
O
3baj 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLN A:349 A:349 95.0 0.528 E -135.3 123.1 95.0 0.528 0.0 HOH
3.995
C
O
3baw 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLN A:349 A:349 94.0 0.522 E -147.7 123.8 94.0 0.522 0.0 HOH
3.781
C
O
3ij7 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLN A:349 A:349 105.0 0.583 E -137.4 115.6 105.0 0.583 0.0 HOH
3.787
C
O
3ij8 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLN A:349 A:349 94.0 0.522 E -138.1 110.3 94.0 0.522 0.0 HOH
3.694
C
O
3ij9 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLN A:349 A:349 92.0 0.511 E -139.8 114.6 92.0 0.511 0.0 HOH
3.747
C
O
4gqq 1 P04746 96.98 0.0 X-RAY
2012-10-24 GLN A:349 A:349 136.0 0.756 -134.7 -172.7 136.0 0.756 0.0
4gqr 1 P04746 96.98 0.0 X-RAY
2012-10-24 GLN A:349 A:349 103.0 0.572 E -135.9 113.4 103.0 0.572 0.0 HOH
2.587
O
O
4w93 1 P04746 96.98 0.0 X-RAY
2015-07-15 GLN A:349 A:349 103.0 0.572 E -141.6 132.2 103.0 0.572 0.0 HOH
2.818
OE1
O
4x9y 1 P04746 96.98 0.0 X-RAY
2014-12-31 GLN A:349 A:349 104.0 0.578 E -130.4 124.6 104.0 0.578 0.0 HOH
2.708
O
O
5e0f 1 P04746 96.98 0.0 X-RAY
2016-09-07 GLN A:349 A:349 95.0 0.528 E -141.8 106.6 95.0 0.528 0.0 HOH
2.706
OE1
O
5emy 1 P04746 96.98 0.0 X-RAY
2016-07-06 GLN A:349 A:349 103.0 0.572 E -132.1 123.3 103.0 0.572 0.0 HOH
2.711
O
O
5kez 1 P04746 96.98 0.0 X-RAY
2017-03-29 GLN A:349 A:349 122.0 0.678 E -134.5 110.5 122.0 0.678 0.0 HOH
7.371
O
O
5u3a 1 P04746 96.98 0.0 X-RAY
2017-12-06 GLN A:349 A:349 101.0 0.561 E -128.8 123.8 101.0 0.561 0.0 HOH
2.683
O
O
5va9 1 P04746 96.98 0.0 X-RAY
2018-03-28 GLN A:349 A:349 126.0 0.7 E -135.4 121.2 121.0 0.672 0.028 C:None:0.028
HOH
7.868
OE1
O
GLN B:349 B:349 136.0 0.756 E -140.6 125.3 NA NA NA
6obx 1 P04746 96.98 0.0 X-RAY
2020-02-12 GLN A:349 A:349 102.0 0.567 E -132.4 122.0 102.0 0.567 0.0 HOH
2.579
O
O
6ocn 1 P04746 96.98 0.0 X-RAY
2020-02-12 GLN A:349 A:349 100.0 0.556 E -131.5 124.1 100.0 0.556 0.0 HOH
2.727
O
O
1kgw 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLN A:349 A:349 112.0 0.622 S -131.7 97.8 112.0 0.622 0.0 HOH
4.053
O
O
1xgz 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLN A:349 A:349 105.0 0.583 E -149.9 123.7 105.0 0.583 0.0 HOH
2.695
O
O
1xh0 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLN A:349 A:349 105.0 0.583 E -132.3 118.6 105.0 0.583 0.0 HOH
2.637
O
O
1xh1 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLN A:349 A:349 94.0 0.522 E -146.0 119.2 94.0 0.522 0.0 HOH
4.747
O
O
1xh2 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLN A:349 A:349 107.0 0.594 E -148.6 110.4 107.0 0.594 0.0 HOH
3.753
CG
O
3bak 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLN A:349 A:349 94.0 0.522 E -143.0 119.2 94.0 0.522 0.0 HOH
4.273
O
O
3bax 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLN A:349 A:349 101.0 0.561 E -143.4 115.7 101.0 0.561 0.0 HOH
3.456
OE1
O
3bay 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLN A:349 A:349 93.0 0.517 E -145.5 124.9 93.0 0.517 0.0 HOH
5.486
OE1
O
1kgx 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLN A:349 A:349 107.0 0.594 S -88.2 -75.8 107.0 0.594 0.0 HOH
5.893
N
O
2cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 GLN A:349 A:349 105.0 0.583 E -129.0 113.7 105.0 0.583 0.0 HOH
6.370
CB
O
3cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 GLN A:349 A:349 106.0 0.589 S -132.2 92.5 106.0 0.589 0.0 HOH
3.927
O
O
5td4 1 P04746 96.77 0.0 X-RAY
2016-11-02 GLN A:349 A:349 119.0 0.661 E -119.6 111.2 119.0 0.661 0.0 GLC
GLC
HOH
9.194
6.233
2.881
NE2
NE2
OE1
O6
O4
O
1kgu 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLN A:349 A:349 107.0 0.594 S -124.4 81.3 107.0 0.594 0.0 HOH
2.679
CB
O
1kb3 1 P04746 96.77 0.0 X-RAY
2002-05-01 GLN A:349 A:349 105.0 0.583 S -89.6 -68.7 105.0 0.583 0.0 HOH
9.293
N
O
1kbb 1 P04746 96.77 0.0 X-RAY
2002-04-10 GLN A:349 A:349 116.0 0.644 E -156.3 109.8 116.0 0.644 0.0 HOH
9.470
N
O
1kbk 1 P04746 96.77 0.0 X-RAY
2002-04-10 GLN A:349 A:349 103.0 0.572 S -149.5 106.7 103.0 0.572 0.0 HOH
9.319
N
O
1kxq 1 P00690 86.29 0.0 X-RAY
2002-06-19 VAL A:349 A:349 67.0 0.432 E -125.0 115.3 9.0 0.058 0.374 H:None:0.374
HOH
3.485
CA
O
VAL B:349 B:349 71.0 0.458 E -135.4 111.0 NA NA NA
VAL C:349 C:349 62.0 0.4 E -133.4 115.1 NA NA NA
VAL D:349 D:349 72.0 0.465 E -126.8 110.4 NA NA NA
1kxt 1 P00690 86.29 0.0 X-RAY
2002-06-19 VAL A:349 A:349 66.0 0.426 E -123.8 117.5 66.0 0.426 0.0 HOH
3.270
CG2
O
VAL C:349 C:349 54.0 0.348 E -130.9 120.2 NA NA NA
VAL E:349 E:349 64.0 0.413 E -126.4 127.9 NA NA NA
1kxv 1 P00690 86.29 0.0 X-RAY
2002-06-19 VAL A:349 A:349 64.0 0.413 E -130.1 121.7 64.0 0.413 0.0 HOH
2.473
CG1
O
VAL B:349 B:349 65.0 0.419 E -122.9 113.9 NA NA NA
1dhk 1 P00690 86.29 0.0 X-RAY
1997-12-24 VAL A:349 A:349 85.0 0.548 E -134.7 108.9 85.0 0.548 0.0 HOH
6.739
H
H2
1ppi 1 P00690 86.29 0.0 X-RAY
1995-05-24 VAL A:349 A:349 62.0 0.4 E -122.5 131.0 62.0 0.4 0.0 HOH
3.656
C
O
1vah 1 P00690 86.09 0.0 X-RAY
2005-04-26 VAL A:349 A:349 61.0 0.394 E -116.0 124.0 61.0 0.394 0.0 HOH
3.990
CA
O
3l2l 1 P00690 86.09 0.0 X-RAY
2010-04-14 VAL A:349 A:349 73.0 0.471 S -130.0 110.6 73.0 0.471 0.0 GLC
HOH
9.119
3.588
HG22
C
H61
O
3l2m 1 P00690 86.09 0.0 X-RAY
2010-04-14 VAL A:349 A:349 73.0 0.471 S -132.8 108.4 73.0 0.471 0.0 HOH
3.605
HA
O
1ua3 1 P00690 86.09 0.0 X-RAY
2003-10-14 VAL A:349 A:349 68.0 0.439 E -101.7 127.7 68.0 0.439 0.0 HOH
3.474
CG1
O
1ose 1 P00690 85.89 0.0 X-RAY
1997-04-01 VAL A:349 A:349 64.0 0.413 E -118.0 115.6 64.0 0.413 0.0 HOH
5.909
CG2
O
1jfh 1 P00690 86.09 0.0 X-RAY
1998-12-02 VAL A:349 A:349 60.0 0.387 E -122.2 122.3 60.0 0.387 0.0 HOH
3.760
C
O
1hx0 1 P00690 85.89 0.0 X-RAY
2001-08-08 VAL A:349 A:349 68.0 0.439 E -123.4 117.7 68.0 0.439 0.0 HOH
3.418
O
O
1wo2 1 P00690 85.89 0.0 X-RAY
2005-03-15 VAL A:349 A:349 61.0 0.394 E -124.6 120.9 61.0 0.394 0.0 HOH
2.814
O
O
1pif 1 P00690 85.69 0.0 X-RAY
1996-12-07 VAL A:349 A:349 81.0 0.523 S -131.0 104.7 81.0 0.523 0.0 HOH
8.437
CG2
O
1pig 1 P00690 85.69 0.0 X-RAY
1996-12-07 VAL A:349 A:349 79.0 0.51 S -134.1 111.0 79.0 0.51 0.0 HOH
6.307
N
O
4x0n 1 P00690 85.69 0.0 X-RAY
2015-11-25 VAL A:349 A:349 65.0 0.419 E -125.6 119.2 65.0 0.419 0.0 HOH
3.883
CG2
O
1bvn 1 P00690 85.48 0.0 X-RAY
1998-09-23 VAL A:349 P:349 87.0 0.561 E -130.4 94.3 87.0 0.561 0.0 HOH
3.895
CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dte7-f1 1 P0DTE7 100.0 0.0 GLU A:364 A:364 102.0 0.537 E -116.4 126.4
af-p0dte8-f1 1 P0DTE8 100.0 0.0 GLU A:364 A:364 103.0 0.542 E -117.1 126.9
af-p0dub6-f1 1 P0DUB6 100.0 0.0 GLU A:364 A:364 98.0 0.516 E -116.7 127.7
af-p19961-f1 1 P19961 97.46 0.0 GLN A:364 A:364 103.0 0.572 E -126.4 126.6
af-p04746-f1 1 P04746 96.87 0.0 GLN A:364 A:364 104.0 0.578 E -128.5 125.5