Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104205393 . A C CCDS30782.1:NM_001008221.1:c.1216Ata>Cta_NP_001008222.1:p.406I>L Homo sapiens amylase, alpha 1A (salivary) (AMY1A), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1c8q 1 P04745 99.8 0.0 X-RAY
2001-06-13 ILE A:391 A:391 1.0 0.006 H -83.8 -44.5 1.0 0.006 0.0 HOH
3.443
CG1
O
1mfv 1 P04745 99.8 0.0 X-RAY
2002-11-20 ILE A:391 A:391 1.0 0.006 H -89.4 -47.4 1.0 0.006 0.0 HOH
5.249
CD1
O
1smd 1 P04745 99.8 0.0 X-RAY
1996-07-11 ILE A:391 A:391 2.0 0.011 H -80.0 -50.6 2.0 0.011 0.0 HOH
3.515
CG1
O
1xv8 1 P04745 99.8 0.0 X-RAY
2005-10-11 ILE A:391 A:391 0.0 0.0 H -85.6 -57.9 0.0 0.0 0.0 HOH
4.453
CD1
O
ILE B:391 B:391 1.0 0.006 H -85.5 -57.9 1.0 0.006 0.0 HOH
4.453
CD1
O
1q4n 1 P04745 99.6 0.0 X-RAY
2004-03-16 ILE A:391 X:391 1.0 0.006 H -82.1 -53.5 1.0 0.006 0.0 HOH
3.548
CA
O
1z32 1 P04745 99.6 0.0 X-RAY
2005-05-31 ILE A:391 X:391 1.0 0.006 H -85.1 -52.2 1.0 0.006 0.0 HOH
3.669
CA
O
1jxj 1 P04745 99.6 0.0 X-RAY
2001-09-14 ILE A:391 A:391 1.0 0.006 H -89.4 -48.4 1.0 0.006 0.0 HOH
3.661
CG1
O
1nm9 1 P04745 99.6 0.0 X-RAY
2004-01-20 ILE A:391 A:391 1.0 0.006 H -88.2 -49.2 1.0 0.006 0.0 HOH
3.649
CA
O
3blk 1 P04745 99.6 0.0 X-RAY
2008-11-25 ILE A:391 A:391 2.0 0.011 H -82.1 -50.3 2.0 0.011 0.0 HOH
3.752
CA
O
3blp 1 P04745 99.6 0.0 X-RAY
2008-11-18 ILE A:391 X:391 4.0 0.023 H -90.3 -47.1 4.0 0.023 0.0 HOH
3.778
CA
O
1jxk 1 P04745 98.79 0.0 X-RAY
2001-09-14 ILE A:386 A:386 2.0 0.011 H -86.5 -46.5 2.0 0.011 0.0 HOH
3.569
CA
O
1mfu 1 P04745 98.79 0.0 X-RAY
2002-11-20 ILE A:386 A:386 2.0 0.011 H -87.9 -50.5 2.0 0.011 0.0 GLC
GLC
AGL
HMC
HOH
9.822
7.685
6.975
9.020
3.706
CD1
N
N
N
CA
O4
O3
O5
O7
O
3dhp 1 P04745 98.59 0.0 X-RAY
2008-07-01 ILE A:391 A:391 6.0 0.034 H -85.1 -50.5 6.0 0.034 0.0 HOH
3.703
CA
O
3old 1 P04746 97.38 0.0 X-RAY
2011-04-13 ILE A:391 A:391 0.0 0.0 H -89.6 -47.5 0.0 0.0 0.0 BGC
GLC
GLC
HOH
9.724
7.437
6.934
3.536
CD1
N
N
CA
O4
O3
O5
O
3ole 1 P04746 97.38 0.0 X-RAY
2011-04-13 ILE A:391 A:391 1.0 0.006 H -89.1 -46.8 1.0 0.006 0.0 BGC
GLC
GLC
HOH
9.712
7.337
6.928
3.690
CD1
N
N
CA
O4
O3
O5
O
3olg 1 P04746 97.38 0.0 X-RAY
2011-04-13 ILE A:391 A:391 1.0 0.006 H -89.6 -47.9 1.0 0.006 0.0 GLC
HOH
7.348
3.625
N
CG1
O3
O
3oli 1 P04746 97.38 0.0 X-RAY
2011-04-13 ILE A:391 A:391 1.0 0.006 H -93.4 -47.6 1.0 0.006 0.0 BGC
MPD
HOH
7.683
7.850
3.801
N
N
CD1
O3
C1
O
6z8l 1 P04746 97.18 0.0 X-RAY
2020-12-02 ILE A:391 A:391 1.0 0.006 H -88.1 -49.5 1.0 0.006 0.0 HOH
2.874
HA
O
1b2y 1 P04746 97.18 0.0 X-RAY
2000-02-16 ILE A:391 A:391 2.0 0.011 H -86.5 -50.4 2.0 0.011 0.0 HOH
6.854
N
O
1bsi 1 P04746 96.98 0.0 X-RAY
1999-05-18 ILE A:391 A:391 2.0 0.011 H -88.1 -49.1 2.0 0.011 0.0 HOH
4.894
CD1
O
1cpu 1 P04746 96.98 0.0 X-RAY
1999-06-14 ILE A:391 A:391 2.0 0.011 H -87.0 -45.6 2.0 0.011 0.0 HOH
3.918
CA
O
1hny 1 P04746 96.98 0.0 X-RAY
1996-03-08 ILE A:391 A:391 2.0 0.011 H -85.4 -54.6 2.0 0.011 0.0 HOH
3.912
CG1
O
1u2y 1 P04746 96.98 0.0 X-RAY
2004-09-07 ILE A:391 A:391 1.0 0.006 H -83.5 -46.4 1.0 0.006 0.0 HOH
3.775
CG1
O
1u30 1 P04746 96.98 0.0 X-RAY
2004-09-07 ILE A:391 A:391 1.0 0.006 H -85.2 -46.9 1.0 0.006 0.0 HOH
4.672
CD1
O
1u33 1 P04746 96.98 0.0 X-RAY
2004-09-07 ILE A:391 A:391 1.0 0.006 H -85.6 -46.1 1.0 0.006 0.0 HOH
3.714
CA
O
1xcw 1 P04746 96.98 0.0 X-RAY
2004-12-07 ILE A:391 A:391 2.0 0.011 H -80.7 -45.7 2.0 0.011 0.0 HOH
4.905
CD1
O
1xcx 1 P04746 96.98 0.0 X-RAY
2004-12-07 ILE A:391 A:391 2.0 0.011 H -84.1 -44.3 2.0 0.011 0.0 HOH
4.807
CD1
O
1xd0 1 P04746 96.98 0.0 X-RAY
2004-12-07 ILE A:391 A:391 1.0 0.006 H -85.5 -48.6 1.0 0.006 0.0 HOH
4.877
CD1
O
1xd1 1 P04746 96.98 0.0 X-RAY
2004-12-07 ILE A:391 A:391 2.0 0.011 H -85.0 -45.8 2.0 0.011 0.0 HOH
7.484
O
O
2qmk 1 P04746 96.98 0.0 X-RAY
2008-03-25 ILE A:391 A:391 1.0 0.006 H -86.8 -58.3 1.0 0.006 0.0 HOH
3.351
CA
O
2qv4 1 P04746 96.98 0.0 X-RAY
2008-03-25 ILE A:391 A:391 1.0 0.006 H -94.0 -49.5 1.0 0.006 0.0 HOH
3.483
CA
O
3bai 1 P04746 96.98 0.0 X-RAY
2008-03-25 ILE A:391 A:391 1.0 0.006 H -86.6 -45.3 1.0 0.006 0.0 HOH
3.662
CG1
O
3baj 1 P04746 96.98 0.0 X-RAY
2008-03-25 ILE A:391 A:391 1.0 0.006 H -87.5 -49.9 1.0 0.006 0.0 HOH
4.935
CD1
O
3baw 1 P04746 96.98 0.0 X-RAY
2008-03-25 ILE A:391 A:391 2.0 0.011 H -90.8 -50.1 2.0 0.011 0.0 HOH
3.610
CA
O
3ij7 1 P04746 96.98 0.0 X-RAY
2009-10-27 ILE A:391 A:391 1.0 0.006 H -90.4 -44.7 1.0 0.006 0.0 GLF
B8D
HOH
7.247
7.070
3.660
N
N
CA
O3
O5
O
3ij8 1 P04746 96.98 0.0 X-RAY
2009-10-27 ILE A:391 A:391 1.0 0.006 H -91.4 -47.1 1.0 0.006 0.0 HOH
3.712
CA
O
3ij9 1 P04746 96.98 0.0 X-RAY
2009-10-27 ILE A:391 A:391 1.0 0.006 H -89.7 -46.5 1.0 0.006 0.0 HOH
3.641
CA
O
4gqq 1 P04746 96.98 0.0 X-RAY
2012-10-24 ILE A:391 A:391 1.0 0.006 H -84.3 -48.6 1.0 0.006 0.0 HOH
5.700
CD1
O
4gqr 1 P04746 96.98 0.0 X-RAY
2012-10-24 ILE A:391 A:391 0.0 0.0 H -89.3 -49.7 0.0 0.0 0.0 HOH
3.693
CA
O
4w93 1 P04746 96.98 0.0 X-RAY
2015-07-15 ILE A:391 A:391 1.0 0.006 H -84.4 -49.7 1.0 0.006 0.0 HOH
3.677
CA
O
4x9y 1 P04746 96.98 0.0 X-RAY
2014-12-31 ILE A:391 A:391 0.0 0.0 H -90.6 -51.4 0.0 0.0 0.0 HOH
2.834
HA
O
5e0f 1 P04746 96.98 0.0 X-RAY
2016-09-07 ILE A:391 A:391 1.0 0.006 H -88.3 -52.0 1.0 0.006 0.0 HOH
2.823
HA
O
5emy 1 P04746 96.98 0.0 X-RAY
2016-07-06 ILE A:391 A:391 0.0 0.0 H -90.5 -51.1 0.0 0.0 0.0 HOH
2.826
HA
O
5kez 1 P04746 96.98 0.0 X-RAY
2017-03-29 ILE A:391 A:391 1.0 0.006 H -87.0 -51.5 1.0 0.006 0.0 HOH
3.753
CA
O
5u3a 1 P04746 96.98 0.0 X-RAY
2017-12-06 ILE A:391 A:391 1.0 0.006 H -90.5 -51.4 1.0 0.006 0.0 HOH
2.835
HA
O
5va9 1 P04746 96.98 0.0 X-RAY
2018-03-28 ILE A:391 A:391 1.0 0.006 H -86.7 -46.6 1.0 0.006 0.0 HOH
6.719
N
O
ILE B:391 B:391 0.0 0.0 H -86.1 -46.3 NA NA NA
6obx 1 P04746 96.98 0.0 X-RAY
2020-02-12 ILE A:391 A:391 0.0 0.0 H -89.8 -52.2 0.0 0.0 0.0 HOH
2.834
HA
O
6ocn 1 P04746 96.98 0.0 X-RAY
2020-02-12 ILE A:391 A:391 1.0 0.006 H -89.3 -51.7 1.0 0.006 0.0 HOH
2.840
HA
O
1kgw 1 P04746 96.77 0.0 X-RAY
2002-01-16 ILE A:391 A:391 1.0 0.006 H -84.4 -48.4 1.0 0.006 0.0 HOH
3.975
CD1
O
1xgz 1 P04746 96.77 0.0 X-RAY
2005-05-24 ILE A:391 A:391 3.0 0.017 H -80.6 -48.3 3.0 0.017 0.0 HOH
3.812
CA
O
1xh0 1 P04746 96.77 0.0 X-RAY
2005-05-24 ILE A:391 A:391 2.0 0.011 H -81.1 -52.4 2.0 0.011 0.0 HOH
3.752
CA
O
1xh1 1 P04746 96.77 0.0 X-RAY
2005-05-24 ILE A:391 A:391 1.0 0.006 H -86.6 -45.2 1.0 0.006 0.0 HOH
3.559
CG1
O
1xh2 1 P04746 96.77 0.0 X-RAY
2005-05-24 ILE A:391 A:391 2.0 0.011 H -86.7 -46.0 2.0 0.011 0.0 HOH
3.773
CA
O
3bak 1 P04746 96.77 0.0 X-RAY
2008-03-25 ILE A:391 A:391 1.0 0.006 H -83.9 -46.4 1.0 0.006 0.0 HOH
3.557
CG1
O
3bax 1 P04746 96.77 0.0 X-RAY
2008-03-25 ILE A:391 A:391 2.0 0.011 H -90.7 -49.3 2.0 0.011 0.0 HOH
3.564
CA
O
3bay 1 P04746 96.77 0.0 X-RAY
2008-03-25 ILE A:391 A:391 2.0 0.011 H -78.9 -54.5 2.0 0.011 0.0 HOH
5.413
CD1
O
1kgx 1 P04746 96.77 0.0 X-RAY
2002-01-16 ILE A:391 A:391 2.0 0.011 H -84.9 -45.2 2.0 0.011 0.0 HOH
2.554
CG1
O
2cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 ILE A:391 A:391 2.0 0.011 H -84.6 -48.1 2.0 0.011 0.0 HOH
5.077
CD1
O
3cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 ILE A:391 A:391 2.0 0.011 H -78.5 -50.6 2.0 0.011 0.0 HOH
3.903
CD1
O
5td4 1 P04746 96.77 0.0 X-RAY
2016-11-02 ILE A:391 A:391 1.0 0.006 H -85.7 -50.0 1.0 0.006 0.0 HOH
3.611
CA
O
1kgu 1 P04746 96.77 0.0 X-RAY
2002-01-16 ILE A:391 A:391 2.0 0.011 H -86.7 -47.8 2.0 0.011 0.0 HOH
3.895
CD1
O
1kb3 1 P04746 96.77 0.0 X-RAY
2002-05-01 ILE A:391 A:391 2.0 0.011 H -88.4 -46.3 2.0 0.011 0.0 HOH
3.711
CA
O
1kbb 1 P04746 96.77 0.0 X-RAY
2002-04-10 ILE A:391 A:391 1.0 0.006 H -84.7 -50.2 1.0 0.006 0.0 HOH
4.183
CD1
O
1kbk 1 P04746 96.77 0.0 X-RAY
2002-04-10 ILE A:391 A:391 2.0 0.011 H -87.3 -44.8 2.0 0.011 0.0 HOH
3.713
CA
O
1kxq 1 P00690 86.29 0.0 X-RAY
2002-06-19 ILE A:391 A:391 1.0 0.006 H -93.3 -47.8 1.0 0.006 0.0 HOH
2.696
CD1
O
ILE B:391 B:391 1.0 0.006 H -91.6 -49.3 NA NA NA
ILE C:391 C:391 2.0 0.011 H -94.1 -45.8 NA NA NA
ILE D:391 D:391 2.0 0.011 H -93.4 -48.7 NA NA NA
1kxt 1 P00690 86.29 0.0 X-RAY
2002-06-19 ILE A:391 A:391 1.0 0.006 H -87.5 -42.1 1.0 0.006 0.0 HOH
3.914
CA
O
ILE C:391 C:391 2.0 0.011 H -92.9 -52.7 NA NA NA
ILE E:391 E:391 1.0 0.006 H -90.1 -38.5 NA NA NA
1kxv 1 P00690 86.29 0.0 X-RAY
2002-06-19 ILE A:391 A:391 1.0 0.006 H -87.0 -47.2 1.0 0.006 0.0 HOH
3.629
CG1
O
ILE B:391 B:391 2.0 0.011 H -86.6 -50.4 NA NA NA
1dhk 1 P00690 86.29 0.0 X-RAY
1997-12-24 ILE A:391 A:391 2.0 0.011 H -85.2 -42.8 2.0 0.011 0.0 HOH
3.587
CD1
O
1ppi 1 P00690 86.29 0.0 X-RAY
1995-05-24 ILE A:391 A:391 3.0 0.017 H -75.8 -51.7 3.0 0.017 0.0 HOH
3.807
CD1
O
1vah 1 P00690 86.09 0.0 X-RAY
2005-04-26 ILE A:391 A:391 2.0 0.011 H -75.6 -46.8 2.0 0.011 0.0 HOH
6.279
O
O
3l2l 1 P00690 86.09 0.0 X-RAY
2010-04-14 ILE A:391 A:391 3.0 0.017 H -84.3 -48.9 3.0 0.017 0.0 HOH
2.865
HG12
O
3l2m 1 P00690 86.09 0.0 X-RAY
2010-04-14 ILE A:391 A:391 2.0 0.011 H -84.4 -50.4 2.0 0.011 0.0 HOH
2.915
HG12
O
1ua3 1 P00690 86.09 0.0 X-RAY
2003-10-14 ILE A:391 A:391 1.0 0.006 H -92.7 -48.3 1.0 0.006 0.0 GLC
GLC
HOH
7.408
6.956
3.671
N
N
CD1
O3
O5
O
1ose 1 P00690 85.89 0.0 X-RAY
1997-04-01 ILE A:391 A:391 1.0 0.006 H -86.2 -49.3 1.0 0.006 0.0 HOH
3.489
CD1
O
1jfh 1 P00690 86.09 0.0 X-RAY
1998-12-02 ILE A:391 A:391 1.0 0.006 H -86.9 -45.0 1.0 0.006 0.0 MA1
GLC
HOH
7.585
7.001
3.777
N
N
CD1
O3
O5
O
1hx0 1 P00690 85.89 0.0 X-RAY
2001-08-08 ILE A:391 A:391 1.0 0.006 H -89.9 -47.6 1.0 0.006 0.0 EDO
EDO
HOH
7.155
9.908
3.827
CD1
CD1
CA
C2
O1
O
1wo2 1 P00690 85.89 0.0 X-RAY
2005-03-15 ILE A:391 A:391 2.0 0.011 H -91.1 -45.6 2.0 0.011 0.0 BGC
GLC
HOH
7.382
7.239
3.571
N
N
CD1
O3
O5
O
1pif 1 P00690 85.69 0.0 X-RAY
1996-12-07 ILE A:391 A:391 2.0 0.011 H -81.5 -52.5 2.0 0.011 0.0 HOH
3.563
CG1
O
1pig 1 P00690 85.69 0.0 X-RAY
1996-12-07 ILE A:391 A:391 2.0 0.011 H -84.7 -47.3 2.0 0.011 0.0 GLC
GLC
HOH
7.224
6.890
3.514
N
N
CG1
O3
O5
O
4x0n 1 P00690 85.69 0.0 X-RAY
2015-11-25 ILE A:391 A:391 2.0 0.011 H -89.4 -46.8 2.0 0.011 0.0 HOH
5.878
O
O
1bvn 1 P00690 85.48 0.0 X-RAY
1998-09-23 ILE A:391 P:391 4.0 0.023 H -80.4 -48.1 4.0 0.023 0.0 HOH
5.923
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dte7-f1 1 P0DTE7 100.0 0.0 ILE A:406 A:406 1.0 0.006 H -79.8 -50.0
af-p0dte8-f1 1 P0DTE8 100.0 0.0 ILE A:406 A:406 1.0 0.006 H -80.0 -49.7
af-p0dub6-f1 1 P0DUB6 100.0 0.0 ILE A:406 A:406 1.0 0.006 H -81.0 -49.8
af-p19961-f1 1 P19961 97.46 0.0 ILE A:406 A:406 1.0 0.006 H -79.6 -49.4
af-p04746-f1 1 P04746 96.87 0.0 ILE A:406 A:406 1.0 0.006 H -76.6 -50.4