Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104234213 . C A CCDS30783.1:NM_001008218.1:c.898Ggt>Tgt_NP_001008219.1:p.300G>C Homo sapiens amylase, alpha 1B (salivary) (AMY1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1c8q 1 P04745 99.8 0.0 X-RAY
 2001-06-13 GLY A:285 A:285 45.0 0.6 T 96.0 3.8 45.0 0.6 0.0 HOH
 3.053
 O
 O
1mfv 1 P04745 99.8 0.0 X-RAY
 2002-11-20 GLY A:285 A:285 47.0 0.627 T 85.1 11.1 47.0 0.627 0.0 BGC
GLC
AGL
HOH
 9.457
6.074
3.742
3.299
 N
N
N
O
 O3
C6
C6
O
1smd 1 P04745 99.8 0.0 X-RAY
 1996-07-11 GLY A:285 A:285 49.0 0.653 T 92.4 10.4 49.0 0.653 0.0 HOH
 3.731
 O
 O
1xv8 1 P04745 99.8 0.0 X-RAY
 2005-10-11 GLY A:285 A:285 45.0 0.6 T 84.6 23.3 19.0 0.253 0.347 B:P04745:0.347
 HOH
 2.548
 O
 O
GLY B:285 B:285 44.0 0.587 T 84.6 23.3 19.0 0.253 0.334 A:P04745:0.333
 HOH
 3.301
 O
 O
1q4n 1 P04745 99.6 0.0 X-RAY
 2004-03-16 GLY A:285 X:285 44.0 0.587 T 86.9 11.0 44.0 0.587 0.0 HOH
 3.112
 O
 O
1z32 1 P04745 99.6 0.0 X-RAY
 2005-05-31 GLY A:285 X:285 46.0 0.613 T 90.5 10.1 46.0 0.613 0.0 HOH
 3.223
 O
 O
1jxj 1 P04745 99.6 0.0 X-RAY
 2001-09-14 GLY A:285 A:285 44.0 0.587 T 89.3 7.2 44.0 0.587 0.0 HOH
 3.210
 O
 O
1nm9 1 P04745 99.6 0.0 X-RAY
 2004-01-20 GLY A:285 A:285 48.0 0.64 T 86.4 10.9 48.0 0.64 0.0 GLC
AGL
GLC
HOH
 6.121
3.776
9.540
3.181
 N
N
N
O
 C6
C6
O3
O
3blk 1 P04745 99.6 0.0 X-RAY
 2008-11-25 GLY A:285 A:285 50.0 0.667 T 81.7 18.5 50.0 0.667 0.0 HOH
 4.019
 O
 O
3blp 1 P04745 99.6 0.0 X-RAY
 2008-11-18 GLY A:285 X:285 47.0 0.627 T 85.8 11.9 47.0 0.627 0.0 HOH
 3.224
 O
 O
1jxk 1 P04745 98.79 0.0 X-RAY
 2001-09-14 GLY A:285 A:285 45.0 0.6 T 90.4 8.9 45.0 0.6 0.0 HOH
 3.203
 O
 O
1mfu 1 P04745 98.79 0.0 X-RAY
 2002-11-20 GLY A:285 A:285 47.0 0.627 T 79.3 17.1 47.0 0.627 0.0 GLC
GLC
AGL
HMC
HOH
 9.666
6.261
3.887
5.501
3.155
 N
N
N
CA
O
 O3
C6
C6
C1
O
3dhp 1 P04745 98.59 0.0 X-RAY
 2008-07-01 GLY A:285 A:285 46.0 0.613 T 99.5 5.7 46.0 0.613 0.0 HOH
 3.193
 O
 O
3old 1 P04746 97.38 0.0 X-RAY
 2011-04-13 GLY A:285 A:285 44.0 0.587 T 84.3 16.5 44.0 0.587 0.0 HOH
 3.063
 O
 O
3ole 1 P04746 97.38 0.0 X-RAY
 2011-04-13 GLY A:285 A:285 44.0 0.587 T 89.2 10.7 44.0 0.587 0.0 HOH
 3.017
 O
 O
3olg 1 P04746 97.38 0.0 X-RAY
 2011-04-13 GLY A:285 A:285 49.0 0.653 T 90.8 8.0 49.0 0.653 0.0 HOH
 3.142
 O
 O
3oli 1 P04746 97.38 0.0 X-RAY
 2011-04-13 GLY A:285 A:285 44.0 0.587 T 88.3 10.9 44.0 0.587 0.0 HOH
 3.105
 O
 O
6z8l 1 P04746 97.18 0.0 X-RAY
 2020-12-02 GLY A:285 A:285 47.0 0.627 T 88.0 8.4 47.0 0.627 0.0 GLC
GLC
HOH
 9.361
5.039
2.781
 H
N
HA2
 O3
HO4
O
1b2y 1 P04746 97.18 0.0 X-RAY
 2000-02-16 GLY A:285 A:285 47.0 0.627 T 84.2 13.8 47.0 0.627 0.0 HOH
 7.071
 O
 O
1bsi 1 P04746 96.98 0.0 X-RAY
 1999-05-18 GLY A:285 A:285 44.0 0.587 T 85.7 21.0 44.0 0.587 0.0 HOH
 6.186
 O
 O
1cpu 1 P04746 96.98 0.0 X-RAY
 1999-06-14 GLY A:285 A:285 44.0 0.587 T 87.4 16.7 44.0 0.587 0.0 HOH
 3.286
 O
 O
1hny 1 P04746 96.98 0.0 X-RAY
 1996-03-08 GLY A:285 A:285 48.0 0.64 T 83.2 16.7 48.0 0.64 0.0 HOH
 4.149
 CA
 O
1u2y 1 P04746 96.98 0.0 X-RAY
 2004-09-07 GLY A:285 A:285 46.0 0.613 T 80.9 23.1 46.0 0.613 0.0 HOH
 3.196
 O
 O
1u30 1 P04746 96.98 0.0 X-RAY
 2004-09-07 GLY A:285 A:285 45.0 0.6 T 85.5 19.2 45.0 0.6 0.0 HOH
 3.109
 O
 O
1u33 1 P04746 96.98 0.0 X-RAY
 2004-09-07 GLY A:285 A:285 45.0 0.6 T 78.7 21.5 45.0 0.6 0.0 HOH
 3.132
 O
 O
1xcw 1 P04746 96.98 0.0 X-RAY
 2004-12-07 GLY A:285 A:285 51.0 0.68 T 83.6 17.2 51.0 0.68 0.0 HOH
 5.888
 N
 O
1xcx 1 P04746 96.98 0.0 X-RAY
 2004-12-07 GLY A:285 A:285 46.0 0.613 T 85.6 15.4 46.0 0.613 0.0 HOH
 2.907
 O
 O
1xd0 1 P04746 96.98 0.0 X-RAY
 2004-12-07 GLY A:285 A:285 42.0 0.56 T 90.5 18.3 42.0 0.56 0.0 HOH
 3.086
 O
 O
1xd1 1 P04746 96.98 0.0 X-RAY
 2004-12-07 GLY A:285 A:285 45.0 0.6 T 86.1 18.1 45.0 0.6 0.0 HOH
 3.085
 O
 O
2qmk 1 P04746 96.98 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 48.0 0.64 T 80.8 9.0 48.0 0.64 0.0 HOH
 2.650
 O
 O
2qv4 1 P04746 96.98 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 45.0 0.6 T 82.8 14.3 45.0 0.6 0.0 HOH
 2.957
 O
 O
3bai 1 P04746 96.98 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 45.0 0.6 T 85.0 21.0 45.0 0.6 0.0 HOH
 3.234
 O
 O
3baj 1 P04746 96.98 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 47.0 0.627 T 80.7 27.0 47.0 0.627 0.0 HOH
 3.169
 O
 O
3baw 1 P04746 96.98 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 46.0 0.613 T 84.0 12.1 46.0 0.613 0.0 HOH
 3.035
 O
 O
3ij7 1 P04746 96.98 0.0 X-RAY
 2009-10-27 GLY A:285 A:285 45.0 0.6 T 87.2 14.6 45.0 0.6 0.0 HOH
 3.148
 O
 O
3ij8 1 P04746 96.98 0.0 X-RAY
 2009-10-27 GLY A:285 A:285 45.0 0.6 T 87.4 13.8 45.0 0.6 0.0 HOH
 3.037
 O
 O
3ij9 1 P04746 96.98 0.0 X-RAY
 2009-10-27 GLY A:285 A:285 46.0 0.613 T 84.6 13.1 46.0 0.613 0.0 HOH
 3.113
 O
 O
4gqq 1 P04746 96.98 0.0 X-RAY
 2012-10-24 GLY A:285 A:285 58.0 0.773 T 82.5 17.7 58.0 0.773 0.0 0XR
HOH
 2.447
4.751
 O
O
 O3
O
4gqr 1 P04746 96.98 0.0 X-RAY
 2012-10-24 GLY A:285 A:285 46.0 0.613 T 85.3 15.4 46.0 0.613 0.0 HOH
 2.878
 O
 O
4w93 1 P04746 96.98 0.0 X-RAY
 2015-07-15 GLY A:285 A:285 45.0 0.6 T 83.7 19.1 45.0 0.6 0.0 HOH
 3.009
 O
 O
4x9y 1 P04746 96.98 0.0 X-RAY
 2014-12-31 GLY A:285 A:285 44.0 0.587 T 89.9 15.4 44.0 0.587 0.0 HOH
 2.761
 HA2
 O
5e0f 1 P04746 96.98 0.0 X-RAY
 2016-09-07 GLY A:285 A:285 44.0 0.587 T 92.3 11.5 44.0 0.587 0.0 HOH
 2.508
 HA2
 O
5emy 1 P04746 96.98 0.0 X-RAY
 2016-07-06 GLY A:285 A:285 43.0 0.573 T 90.0 14.1 43.0 0.573 0.0 HOH
 2.846
 HA2
 O
5kez 1 P04746 96.98 0.0 X-RAY
 2017-03-29 GLY A:285 A:285 44.0 0.587 T 86.1 15.8 44.0 0.587 0.0 HOH
 6.944
 N
 O
5u3a 1 P04746 96.98 0.0 X-RAY
 2017-12-06 GLY A:285 A:285 42.0 0.56 T 90.7 14.1 42.0 0.56 0.0 HOH
 2.845
 HA2
 O
5va9 1 P04746 96.98 0.0 X-RAY
 2018-03-28 GLY A:285 A:285 45.0 0.6 T 82.7 20.7 45.0 0.6 0.0 HOH
 6.462
 N
 O
GLY B:285 B:285 46.0 0.613 T 83.1 20.8 NA NA NA
6obx 1 P04746 96.98 0.0 X-RAY
 2020-02-12 GLY A:285 A:285 44.0 0.587 T 90.8 11.9 44.0 0.587 0.0 HOH
 2.839
 HA2
 O
6ocn 1 P04746 96.98 0.0 X-RAY
 2020-02-12 GLY A:285 A:285 43.0 0.573 T 89.9 13.9 43.0 0.573 0.0 HOH
 2.800
 HA2
 O
1kgw 1 P04746 96.77 0.0 X-RAY
 2002-01-16 GLY A:285 A:285 46.0 0.613 T 91.8 15.6 46.0 0.613 0.0 HOH
 6.429
 O
 O
1xgz 1 P04746 96.77 0.0 X-RAY
 2005-05-24 GLY A:285 A:285 46.0 0.613 T 86.5 19.8 46.0 0.613 0.0 HOH
 3.071
 O
 O
1xh0 1 P04746 96.77 0.0 X-RAY
 2005-05-24 GLY A:285 A:285 43.0 0.573 T 90.0 20.0 43.0 0.573 0.0 HOH
 3.049
 O
 O
1xh1 1 P04746 96.77 0.0 X-RAY
 2005-05-24 GLY A:285 A:285 47.0 0.627 T 87.4 16.0 47.0 0.627 0.0 HOH
 3.003
 O
 O
1xh2 1 P04746 96.77 0.0 X-RAY
 2005-05-24 GLY A:285 A:285 45.0 0.6 T 90.9 13.4 45.0 0.6 0.0 HOH
 3.272
 O
 O
3bak 1 P04746 96.77 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 44.0 0.587 T 84.3 16.9 44.0 0.587 0.0 HOH
 3.169
 O
 O
3bax 1 P04746 96.77 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 45.0 0.6 T 86.7 13.2 45.0 0.6 0.0 HOH
 3.038
 O
 O
3bay 1 P04746 96.77 0.0 X-RAY
 2008-03-25 GLY A:285 A:285 47.0 0.627 T 81.5 19.8 47.0 0.627 0.0 HOH
 3.063
 O
 O
1kgx 1 P04746 96.77 0.0 X-RAY
 2002-01-16 GLY A:285 A:285 48.0 0.64 T 90.9 11.7 48.0 0.64 0.0 HOH
 3.102
 O
 O
2cpu 1 P04746 96.77 0.0 X-RAY
 2001-06-30 GLY A:285 A:285 45.0 0.6 T 86.1 16.6 45.0 0.6 0.0 HOH
 3.224
 O
 O
3cpu 1 P04746 96.77 0.0 X-RAY
 2001-06-30 GLY A:285 A:285 54.0 0.72 T 80.0 15.5 54.0 0.72 0.0 HOH
 3.883
 O
 O
5td4 1 P04746 96.77 0.0 X-RAY
 2016-11-02 GLY A:285 A:285 47.0 0.627 T 87.5 12.7 47.0 0.627 0.0 HOH
 3.086
 O
 O
1kgu 1 P04746 96.77 0.0 X-RAY
 2002-01-16 GLY A:285 A:285 51.0 0.68 T 90.4 13.6 51.0 0.68 0.0 HOH
 6.241
 O
 O
1kb3 1 P04746 96.77 0.0 X-RAY
 2002-05-01 GLY A:285 A:285 46.0 0.613 T 90.1 13.7 46.0 0.613 0.0 HOH
 3.215
 O
 O
1kbb 1 P04746 96.77 0.0 X-RAY
 2002-04-10 GLY A:285 A:285 45.0 0.6 T 87.4 18.2 45.0 0.6 0.0 HOH
 6.728
 O
 O
1kbk 1 P04746 96.77 0.0 X-RAY
 2002-04-10 GLY A:285 A:285 46.0 0.613 T 86.7 18.1 46.0 0.613 0.0 HOH
 3.113
 O
 O
1kxq 1 P00690 86.29 0.0 X-RAY
 2002-06-19 GLY A:285 A:285 55.0 0.733 T 87.9 11.8 55.0 0.733 0.0 HOH
 3.176
 CA
 O
GLY B:285 B:285 55.0 0.733 T 88.0 11.2 NA NA NA
GLY C:285 C:285 52.0 0.693 T 83.8 14.2 NA NA NA
GLY D:285 D:285 47.0 0.627 T 86.8 10.8 NA NA NA
1kxt 1 P00690 86.29 0.0 X-RAY
 2002-06-19 GLY A:285 A:285 52.0 0.693 T 96.0 1.1 14.0 0.187 0.506 B:None:0.507
 HOH
 2.280
 O
 O
GLY C:285 C:285 51.0 0.68 T 118.4 1.8 NA NA NA
GLY E:285 E:285 48.0 0.64 T 85.5 13.1 NA NA NA
1kxv 1 P00690 86.29 0.0 X-RAY
 2002-06-19 GLY A:285 A:285 56.0 0.747 T 88.9 10.2 19.0 0.253 0.494 C:None:0.493
 HOH
 2.800
 O
 O
GLY B:285 B:285 48.0 0.64 T 91.2 12.8 NA NA NA
1dhk 1 P00690 86.29 0.0 X-RAY
 1997-12-24 GLY A:285 A:285 45.0 0.6 T 88.9 20.8 45.0 0.6 0.0 HOH
 2.362
 O
 H1
1ppi 1 P00690 86.29 0.0 X-RAY
 1995-05-24 GLY A:285 A:285 48.0 0.64 T 87.1 18.8 48.0 0.64 0.0 HOH
 3.580
 O
 O
1vah 1 P00690 86.09 0.0 X-RAY
 2005-04-26 GLY A:285 A:285 47.0 0.627 T 89.3 15.6 47.0 0.627 0.0 HOH
 3.653
 C
 O
3l2l 1 P00690 86.09 0.0 X-RAY
 2010-04-14 GLY A:285 A:285 47.0 0.627 T 84.1 19.2 47.0 0.627 0.0 HOH
 2.748
 HA3
 O
3l2m 1 P00690 86.09 0.0 X-RAY
 2010-04-14 GLY A:285 A:285 49.0 0.653 T 82.1 13.1 49.0 0.653 0.0 HOH
 2.882
 HA3
 O
1ua3 1 P00690 86.09 0.0 X-RAY
 2003-10-14 GLY A:285 A:285 46.0 0.613 T 86.8 15.9 46.0 0.613 0.0 GLC
GLC
HOH
 6.378
3.851
3.002
 N
N
O
 O4
O6
O
1ose 1 P00690 85.89 0.0 X-RAY
 1997-04-01 GLY A:285 A:285 45.0 0.6 T 87.1 16.7 45.0 0.6 0.0 BGC
HOH
 5.972
3.948
 N
O
 O4
O
1jfh 1 P00690 86.09 0.0 X-RAY
 1998-12-02 GLY A:285 A:285 46.0 0.613 T 89.4 15.5 46.0 0.613 0.0 HOH
 3.725
 O
 O
1hx0 1 P00690 85.89 0.0 X-RAY
 2001-08-08 GLY A:285 A:285 45.0 0.6 T 85.4 13.6 45.0 0.6 0.0 GLC
GLC
HOH
 6.379
3.738
2.949
 N
N
O
 C6
C6
O
1wo2 1 P00690 85.89 0.0 X-RAY
 2005-03-15 GLY A:285 A:285 46.0 0.613 T 84.2 13.6 46.0 0.613 0.0 GLC
GLC
HOH
 6.341
3.746
3.363
 N
N
CA
 O4
C6
O
1pif 1 P00690 85.69 0.0 X-RAY
 1996-12-07 GLY A:285 A:285 44.0 0.587 T 88.9 17.4 44.0 0.587 0.0 HOH
 3.707
 O
 O
1pig 1 P00690 85.69 0.0 X-RAY
 1996-12-07 GLY A:285 A:285 47.0 0.627 T 78.0 20.2 47.0 0.627 0.0 GLC
BGC
HOH
 6.246
3.818
3.821
 N
N
O
 O4
C6
O
4x0n 1 P00690 85.69 0.0 X-RAY
 2015-11-25 GLY A:285 A:285 47.0 0.627 T 85.8 14.5 47.0 0.627 0.0 HOH
 3.560
 O
 O
1bvn 1 P00690 85.48 0.0 X-RAY
 1998-09-23 GLY A:285 P:285 54.0 0.72 T 77.3 29.7 54.0 0.72 0.0 HOH
 6.606
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dte7-f1 1 P0DTE7 100.0 0.0 GLY A:300 A:300 49.0 0.653 T 75.2 24.3
af-p0dte8-f1 1 P0DTE8 100.0 0.0 GLY A:300 A:300 46.0 0.613 T 75.3 24.2
af-p0dub6-f1 1 P0DUB6 100.0 0.0 GLY A:300 A:300 47.0 0.627 T 75.9 24.2
af-p19961-f1 1 P19961 97.46 0.0 GLY A:300 A:300 47.0 0.627 T 75.2 24.0
af-p04746-f1 1 P04746 96.87 0.0 GLY A:300 A:300 49.0 0.653 T 75.4 24.8