Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104297206 . G A CCDS30784.1:NM_001008219.1:c.964Gct>Act_NP_001008220.1:p.322A>T Homo sapiens amylase, alpha 1C (salivary) (AMY1C), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1c8q 1 P04745 99.8 0.0 X-RAY
2001-06-13 ALA A:307 A:307 29.0 0.252 -52.0 169.6 29.0 0.252 0.0 HOH
3.907
CA
O
1mfv 1 P04745 99.8 0.0 X-RAY
2002-11-20 ALA A:307 A:307 47.0 0.409 T -73.6 -17.0 47.0 0.409 0.0 GLC
GLC
AGL
HMC
HOH
8.395
3.750
5.641
8.407
3.171
N
CA
N
N
N
O2
O1
C5
C1
O
1smd 1 P04745 99.8 0.0 X-RAY
1996-07-11 ALA A:307 A:307 14.0 0.122 S -154.0 137.9 14.0 0.122 0.0 CL
HOH
9.614
2.741
N
O
CL
O
1xv8 1 P04745 99.8 0.0 X-RAY
2005-10-11 ALA A:307 A:307 33.0 0.287 S -60.0 -63.9 33.0 0.287 0.0 CL
HOH
9.674
3.877
CB
N
CL
O
ALA B:307 B:307 34.0 0.296 S -60.0 -63.9 34.0 0.296 0.0 CL
HOH
9.674
3.877
CB
N
CL
O
1q4n 1 P04745 99.6 0.0 X-RAY
2004-03-16 ALA A:307 X:307 20.0 0.174 S -130.0 160.6 20.0 0.174 0.0 CL
TAM
HOH
9.656
7.880
3.260
O
N
O
CL
O5
O
1z32 1 P04745 99.6 0.0 X-RAY
2005-05-31 ALA A:307 X:307 56.0 0.487 T -84.3 -6.3 56.0 0.487 0.0 GLC
AGL
HMC
HOH
8.122
5.405
8.154
3.043
N
N
N
N
O2
C5
C1
O
1jxj 1 P04745 99.6 0.0 X-RAY
2001-09-14 ALA A:307 A:307 54.0 0.47 T -60.7 -33.7 54.0 0.47 0.0 HOH
2.608
N
O
1nm9 1 P04745 99.6 0.0 X-RAY
2004-01-20 ALA A:307 A:307 24.0 0.209 S -94.0 -121.7 24.0 0.209 0.0 GLC
AGL
HMC
CL
HOH
4.202
5.812
8.477
9.911
3.135
CA
N
N
N
N
O1
C5
C1
CL
O
3blk 1 P04745 99.6 0.0 X-RAY
2008-11-25 ALA A:307 A:307 45.0 0.391 T -74.6 -12.6 45.0 0.391 0.0 GLC
GLC
AGL
CL
HMC
HOH
8.359
4.017
5.533
9.992
8.253
2.661
N
CA
N
N
N
N
O2
O1
C5
CL
C1
O
3blp 1 P04745 99.6 0.0 X-RAY
2008-11-18 ALA A:307 X:307 52.0 0.452 T -77.7 -17.2 52.0 0.452 0.0 GLC
GLC
AGL
HMC
HOH
8.319
3.811
5.617
8.350
2.927
N
CA
N
N
N
O2
O1
C5
C1
O
3dhp 1 P04745 98.59 0.0 X-RAY
2008-07-01 ALA A:307 A:307 52.0 0.452 T -78.6 -13.1 52.0 0.452 0.0 GLC
AGL
GLC
HMC
HOH
3.631
5.578
8.287
8.313
2.916
CB
N
N
N
N
O1
C5
O2
C1
O
3old 1 P04746 97.38 0.0 X-RAY
2011-04-13 ALA A:307 A:307 27.0 0.235 S -146.3 166.0 27.0 0.235 0.0 GLC
GLC
GLC
G6D
CL
ACI
MPD
HOH
8.449
3.753
4.962
5.796
9.135
7.016
5.860
2.551
N
CB
CB
N
O
N
N
N
O2
O4
C5
C6
CL
N1
C5
O
3ole 1 P04746 97.38 0.0 X-RAY
2011-04-13 ALA A:307 A:307 27.0 0.235 S -148.2 161.9 27.0 0.235 0.0 GLC
GLC
GLC
G6D
CL
ACI
MPD
HOH
8.365
3.823
4.869
5.738
8.992
6.982
5.864
2.554
N
CB
CB
N
O
N
N
N
O2
O4
C5
C5
CL
N1
C5
O
3olg 1 P04746 97.38 0.0 X-RAY
2011-04-13 ALA A:307 A:307 28.0 0.243 S -140.2 106.5 28.0 0.243 0.0 GLC
BGC
GLC
G6D
CL
HSD
HOH
8.442
3.900
4.750
5.679
9.286
7.026
3.516
N
CB
N
N
O
N
O
O2
O4
C5
C5
CL
N1
O
3oli 1 P04746 97.38 0.0 X-RAY
2011-04-13 ALA A:307 A:307 48.0 0.417 T -76.0 -16.7 48.0 0.417 0.0 GLC
GLC
GLC
G6D
CL
HSD
HOH
8.331
3.918
4.384
5.492
9.902
6.912
2.627
N
CA
N
N
N
N
O
O2
O6
C5
C5
CL
N1
O
6z8l 1 P04746 97.18 0.0 X-RAY
2020-12-02 ALA A:307 A:307 49.0 0.426 T -78.3 -11.7 49.0 0.426 0.0 GLC
GLC
GLC
CL
HOH
7.546
4.391
2.208
9.093
2.166
N
N
HA
H
H
HO2
H4
H61
CL
O
1b2y 1 P04746 97.18 0.0 X-RAY
2000-02-16 ALA A:307 A:307 20.0 0.174 S -137.8 146.2 20.0 0.174 0.0 BGC
AC1
GLC
CL
HOH
4.735
6.162
8.565
9.346
2.691
CB
N
N
O
N
C1
C5
O2
CL
O
1bsi 1 P04746 96.98 0.0 X-RAY
1999-05-18 ALA A:307 A:307 11.0 0.096 T -54.1 124.0 11.0 0.096 0.0 CL
HOH
9.417
2.666
CB
N
CL
O
1cpu 1 P04746 96.98 0.0 X-RAY
1999-06-14 ALA A:307 A:307 20.0 0.174 S -147.6 146.6 20.0 0.174 0.0 GLC
AGL
GLC
CL
HMC
HOH
4.291
6.556
9.043
9.577
8.667
2.726
CB
N
N
O
N
N
O1
C5
O2
CL
O2
O
1hny 1 P04746 96.98 0.0 X-RAY
1996-03-08 ALA A:307 A:307 7.0 0.061 S -109.7 51.5 7.0 0.061 0.0 CL
HOH
8.219
2.640
CB
O
CL
O
1u2y 1 P04746 96.98 0.0 X-RAY
2004-09-07 ALA A:307 A:307 14.0 0.122 S -135.8 147.0 14.0 0.122 0.0 CL
GOX
HOH
9.382
5.782
3.075
N
N
O
CL
O6
O
1u30 1 P04746 96.98 0.0 X-RAY
2004-09-07 ALA A:307 A:307 25.0 0.217 S -162.2 147.6 25.0 0.217 0.0 LAG
CL
GOX
HOH
8.665
9.740
5.077
3.007
N
O
CB
O
OA2
CL
C5
O
1u33 1 P04746 96.98 0.0 X-RAY
2004-09-07 ALA A:307 A:307 25.0 0.217 S -151.9 149.3 25.0 0.217 0.0 LM2
CL
HOH
8.551
9.300
2.610
N
O
N
OA2
CL
O
1xcw 1 P04746 96.98 0.0 X-RAY
2004-12-07 ALA A:307 A:307 18.0 0.157 S -131.1 145.9 18.0 0.157 0.0 GLC
AC1
CL
HOH
3.649
6.647
9.572
3.253
CB
N
N
N
O1
C5
CL
O
1xcx 1 P04746 96.98 0.0 X-RAY
2004-12-07 ALA A:307 A:307 16.0 0.139 S -141.0 151.3 16.0 0.139 0.0 BGC
GLC
AC1
CL
HOH
3.868
5.212
6.291
9.442
2.744
CB
N
N
O
N
C6
C5
C5
CL
O
1xd0 1 P04746 96.98 0.0 X-RAY
2004-12-07 ALA A:307 A:307 20.0 0.174 S -132.9 159.2 20.0 0.174 0.0 ARE
CL
HOH
3.587
9.572
3.221
CB
O
C
O1G
CL
O
1xd1 1 P04746 96.98 0.0 X-RAY
2004-12-07 ALA A:307 A:307 8.0 0.07 S -110.6 151.5 8.0 0.07 0.0 6SA
CL
HOH
3.409
9.003
2.615
CB
N
O
CW6
CL
O
2qmk 1 P04746 96.98 0.0 X-RAY
2008-03-25 ALA A:307 A:307 7.0 0.061 T -67.3 148.1 7.0 0.061 0.0 NO2
HOH
8.691
2.721
CB
O
O2
O
2qv4 1 P04746 96.98 0.0 X-RAY
2008-03-25 ALA A:307 A:307 10.0 0.087 T -61.9 143.1 10.0 0.087 0.0 NO2
QV4
HOH
8.500
6.265
2.747
CB
N
N
O1
O1T
O
3bai 1 P04746 96.98 0.0 X-RAY
2008-03-25 ALA A:307 A:307 14.0 0.122 T -59.7 134.7 14.0 0.122 0.0 NO3
HOH
8.537
2.826
O
N
O3
O
3baj 1 P04746 96.98 0.0 X-RAY
2008-03-25 ALA A:307 A:307 28.0 0.243 T -55.7 147.4 28.0 0.243 0.0 ARE
NO3
HOH
4.165
8.851
3.449
CB
O
CA
O1G
O3
O
3baw 1 P04746 96.98 0.0 X-RAY
2008-03-25 ALA A:307 A:307 18.0 0.157 S -128.1 133.6 18.0 0.157 0.0 CL
AZI
NA
HOH
9.284
7.625
8.225
2.611
O
CB
N
N
CL
N3
NA
O
3ij7 1 P04746 96.98 0.0 X-RAY
2009-10-27 ALA A:307 A:307 15.0 0.13 T -72.5 150.6 15.0 0.13 0.0 B9D
BGC
CL
HOH
9.102
9.155
9.187
3.108
N
N
N
O
O3
O2
CL
O
3ij8 1 P04746 96.98 0.0 X-RAY
2009-10-27 ALA A:307 A:307 13.0 0.113 T -65.2 -170.6 13.0 0.113 0.0 B0D
B9D
CL
HOH
4.622
9.326
9.327
2.795
N
N
N
N
O6
O3
CL
O
3ij9 1 P04746 96.98 0.0 X-RAY
2009-10-27 ALA A:307 A:307 12.0 0.104 T -75.4 141.9 12.0 0.104 0.0 B9D
BGC
CL
HOH
8.925
8.698
9.032
2.547
N
N
N
N
O3
O2
CL
O
4gqq 1 P04746 96.98 0.0 X-RAY
2012-10-24 ALA A:307 A:307 74.0 0.643 -112.5 82.9 74.0 0.643 0.0 HOH
6.499
O
O
4gqr 1 P04746 96.98 0.0 X-RAY
2012-10-24 ALA A:307 A:307 8.0 0.07 T -70.0 106.8 8.0 0.07 0.0 CL
MYC
HOH
8.634
8.620
2.756
CB
N
O
CL
O23
O
4w93 1 P04746 96.98 0.0 X-RAY
2015-07-15 ALA A:307 A:307 21.0 0.183 T -99.8 141.7 21.0 0.183 0.0 CL
3L9
HOH
9.704
5.207
2.598
O
N
O
CL
O25
O
4x9y 1 P04746 96.98 0.0 X-RAY
2014-12-31 ALA A:307 A:307 9.0 0.078 T -66.3 113.6 9.0 0.078 0.0 CL
HOH
8.095
1.990
HB3
H
CL
O
5e0f 1 P04746 96.98 0.0 X-RAY
2016-09-07 ALA A:307 A:307 15.0 0.13 T -62.4 110.6 15.0 0.13 0.0 5J7
CL
HOH
3.634
8.401
2.249
HB2
HB3
H
H04
CL
O
5emy 1 P04746 96.98 0.0 X-RAY
2016-07-06 ALA A:307 A:307 53.0 0.461 T -80.0 -7.0 53.0 0.461 0.0 5QP
CL
HOH
7.340
9.013
2.214
H
H
H
HAT1
CL
O
5kez 1 P04746 96.98 0.0 X-RAY
2017-03-29 ALA A:307 A:307 13.0 0.113 T -67.2 108.4 13.0 0.113 0.0 CL
HOH
9.633
2.707
CB
O
CL
O
5u3a 1 P04746 96.98 0.0 X-RAY
2017-12-06 ALA A:307 A:307 9.0 0.078 T -65.1 116.6 9.0 0.078 0.0 CL
HOH
8.089
2.029
HB3
H
CL
O
5va9 1 P04746 96.98 0.0 X-RAY
2018-03-28 ALA A:307 A:307 10.0 0.087 T -63.0 117.8 10.0 0.087 0.0 CL
HOH
8.935
4.350
CB
O
CL
O
ALA B:307 B:307 8.0 0.07 T -62.6 118.8 NA NA NA
6obx 1 P04746 96.98 0.0 X-RAY
2020-02-12 ALA A:307 A:307 10.0 0.087 T -67.7 115.1 10.0 0.087 0.0 CL
ZXU
HOH
8.135
4.808
2.025
HB3
H
H
CL
H23
O
6ocn 1 P04746 96.98 0.0 X-RAY
2020-02-12 ALA A:307 A:307 7.0 0.061 T -67.2 115.2 7.0 0.061 0.0 ZXY
CL
HOH
5.114
8.159
2.028
HB2
HB3
H
H23
CL
O
1kgw 1 P04746 96.77 0.0 X-RAY
2002-01-16 ALA A:307 A:307 14.0 0.122 T -65.6 154.7 14.0 0.122 0.0 HOH
3.183
O
O
1xgz 1 P04746 96.77 0.0 X-RAY
2005-05-24 ALA A:307 A:307 16.0 0.139 T -54.3 122.8 16.0 0.139 0.0 HOH
2.729
O
O
1xh0 1 P04746 96.77 0.0 X-RAY
2005-05-24 ALA A:307 A:307 23.0 0.2 T -59.9 142.7 23.0 0.2 0.0 AAO
HOH
4.439
2.869
CA
O
O1T
O
1xh1 1 P04746 96.77 0.0 X-RAY
2005-05-24 ALA A:307 A:307 14.0 0.122 T -60.8 141.5 14.0 0.122 0.0 CL
HOH
9.423
3.056
N
O
CL
O
1xh2 1 P04746 96.77 0.0 X-RAY
2005-05-24 ALA A:307 A:307 23.0 0.2 T -68.6 145.9 23.0 0.2 0.0 ARE
CL
HOH
4.524
9.529
2.777
CB
O
N
O1G
CL
O
3bak 1 P04746 96.77 0.0 X-RAY
2008-03-25 ALA A:307 A:307 11.0 0.096 T -52.6 146.4 11.0 0.096 0.0 NO3
HOH
8.809
2.750
N
O
O1
O
3bax 1 P04746 96.77 0.0 X-RAY
2008-03-25 ALA A:307 A:307 12.0 0.104 S -145.7 159.1 12.0 0.104 0.0 CL
AZI
NA
HOH
9.000
7.356
8.624
2.603
O
CB
N
N
CL
N3
NA
O
3bay 1 P04746 96.77 0.0 X-RAY
2008-03-25 ALA A:307 A:307 7.0 0.061 S -104.0 139.2 7.0 0.061 0.0 ARE
NO3
HOH
5.196
8.514
4.670
CB
N
O
O1G
O3
O
1kgx 1 P04746 96.77 0.0 X-RAY
2002-01-16 ALA A:307 A:307 15.0 0.13 T -68.0 145.3 15.0 0.13 0.0 HOH
3.186
O
O
2cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 ALA A:307 A:307 11.0 0.096 T -43.9 126.7 11.0 0.096 0.0 CL
HOH
9.078
2.859
CB
O
CL
O
3cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 ALA A:307 A:307 9.0 0.078 T -46.3 132.4 9.0 0.078 0.0 GLC
CL
HOH
8.961
9.069
3.166
N
CB
CA
O2
CL
O
5td4 1 P04746 96.77 0.0 X-RAY
2016-11-02 ALA A:307 A:307 29.0 0.252 S -172.7 165.5 29.0 0.252 0.0 GLC
GLC
GLC
GLC
CL
HOH
3.468
6.404
8.358
8.086
9.281
3.951
CB
N
N
N
O
O
O1
O6
O2
O2
CL
O
1kgu 1 P04746 96.77 0.0 X-RAY
2002-01-16 ALA A:307 A:307 10.0 0.087 T -55.5 127.4 10.0 0.087 0.0 HOH
2.665
N
O
1kb3 1 P04746 96.77 0.0 X-RAY
2002-05-01 ALA A:307 A:307 15.0 0.13 T -65.0 141.7 15.0 0.13 0.0 HOH
2.922
O
O
1kbb 1 P04746 96.77 0.0 X-RAY
2002-04-10 ALA A:307 A:307 24.0 0.209 S -111.0 138.8 24.0 0.209 0.0 CL
HOH
9.835
3.149
O
O
CL
O
1kbk 1 P04746 96.77 0.0 X-RAY
2002-04-10 ALA A:307 A:307 15.0 0.13 T -61.5 127.5 15.0 0.13 0.0 CL
HOH
9.423
2.830
CB
O
CL
O
1kxq 1 P00690 86.29 0.0 X-RAY
2002-06-19 ALA A:307 A:307 15.0 0.13 T -68.5 116.5 15.0 0.13 0.0 CL
HOH
9.277
2.877
CB
O
CL
O
ALA B:307 B:307 12.0 0.104 T -65.0 113.0 NA NA NA
ALA C:307 C:307 15.0 0.13 T -67.4 111.0 NA NA NA
ALA D:307 D:307 14.0 0.122 T -65.0 116.1 NA NA NA
1kxt 1 P00690 86.29 0.0 X-RAY
2002-06-19 ALA A:307 A:307 14.0 0.122 T -79.4 98.1 14.0 0.122 0.0 CL
HOH
8.997
2.888
CB
N
CL
O
ALA C:307 C:307 11.0 0.096 T -46.6 110.6 NA NA NA
ALA E:307 E:307 10.0 0.087 T -84.9 101.9 NA NA NA
1kxv 1 P00690 86.29 0.0 X-RAY
2002-06-19 ALA A:307 A:307 13.0 0.113 T -64.2 108.9 13.0 0.113 0.0 HOH
2.867
O
O
ALA B:307 B:307 13.0 0.113 T -66.5 114.4 NA NA NA
1dhk 1 P00690 86.29 0.0 X-RAY
1997-12-24 ALA A:307 A:307 80.0 0.696 T -81.9 5.8 67.0 0.583 0.113 B:P02873:0.113
HOH
1.375
H
H1
1ppi 1 P00690 86.29 0.0 X-RAY
1995-05-24 ALA A:307 A:307 31.0 0.27 S -148.0 150.4 31.0 0.27 0.0 GLC
BGC
DAF
CL
HOH
8.634
4.366
5.838
9.058
2.914
N
CB
N
O
O
O2
C1
C5
CL
O
1vah 1 P00690 86.09 0.0 X-RAY
2005-04-26 ALA A:307 A:307 6.0 0.052 T -81.2 122.0 6.0 0.052 0.0 CL
NPO
HOH
8.905
9.990
2.946
CB
N
O
CL
O3
O
3l2l 1 P00690 86.09 0.0 X-RAY
2010-04-14 ALA A:307 A:307 13.0 0.113 T -57.1 116.2 13.0 0.113 0.0 GLC
GLC
CL
HOH
5.656
8.318
8.439
2.102
H
H
HB3
H
HO2
HO2
CL
O
3l2m 1 P00690 86.09 0.0 X-RAY
2010-04-14 ALA A:307 A:307 13.0 0.113 T -64.4 115.9 13.0 0.113 0.0 GLC
GLC
GLC
CL
HOH
9.048
6.149
7.029
8.555
2.311
N
H
H
HB3
H
O3
H2
H1
CL
O
1ua3 1 P00690 86.09 0.0 X-RAY
2003-10-14 ALA A:307 A:307 12.0 0.104 T -45.3 114.2 12.0 0.104 0.0 GLC
GLC
CL
HOH
8.907
9.902
9.016
3.090
N
N
CB
N
O1
O2
CL
O
1ose 1 P00690 85.89 0.0 X-RAY
1997-04-01 ALA A:307 A:307 20.0 0.174 S -135.6 147.0 20.0 0.174 0.0 BGC
AC1
GLC
CL
HOH
4.624
6.156
8.751
9.404
2.759
CB
N
N
O
N
C1
C5
O2
CL
O
1jfh 1 P00690 86.09 0.0 X-RAY
1998-12-02 ALA A:307 A:307 59.0 0.513 T -84.3 -15.1 59.0 0.513 0.0 MA3
MA1
GLC
CL
HOH
8.305
3.706
5.949
9.985
3.000
N
CA
N
N
N
O2
S1
C1
CL
O
1hx0 1 P00690 85.89 0.0 X-RAY
2001-08-08 ALA A:307 A:307 23.0 0.2 S -137.8 160.7 23.0 0.2 0.0 GLC
BGC
AC1
GLC
CL
EDO
HOH
3.371
4.784
6.062
8.743
9.508
8.097
2.774
CB
CB
N
N
N
O
N
O1
C1
C5
O2
CL
C1
O
1wo2 1 P00690 85.89 0.0 X-RAY
2005-03-15 ALA A:307 A:307 9.0 0.078 T -64.9 118.6 9.0 0.078 0.0 BGC
GLC
CL
HOH
9.370
9.820
8.970
2.938
N
N
CB
N
O2
O2
CL
O
1pif 1 P00690 85.69 0.0 X-RAY
1996-12-07 ALA A:307 A:307 13.0 0.113 T -62.7 116.8 13.0 0.113 0.0 CL
HOH
9.233
2.999
CB
N
CL
O
1pig 1 P00690 85.69 0.0 X-RAY
1996-12-07 ALA A:307 A:307 16.0 0.139 S -124.5 159.3 16.0 0.139 0.0 GLC
BGC
GLC
AGL
HMC
CL
HOH
9.297
4.009
5.046
6.383
8.491
9.698
2.897
N
CB
N
N
N
N
N
O2
C5
C5
C5
O2
CL
O
4x0n 1 P00690 85.69 0.0 X-RAY
2015-11-25 ALA A:307 A:307 11.0 0.096 T -92.6 116.5 8.0 0.07 0.026 B:None:0.026
CL
GOL
HOH
9.047
6.456
2.884
CB
N
N
CL
O1
O
1bvn 1 P00690 85.48 0.0 X-RAY
1998-09-23 ALA A:307 P:307 19.0 0.165 T -67.3 93.1 4.0 0.035 0.13 B:P01092:0.13
CL
HOH
9.131
3.850
CB
N
CL
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dte7-f1 1 P0DTE7 100.0 0.0 ALA A:322 A:322 6.0 0.052 T -71.3 135.3
af-p0dte8-f1 1 P0DTE8 100.0 0.0 ALA A:322 A:322 5.0 0.043 T -67.8 131.0
af-p0dub6-f1 1 P0DUB6 100.0 0.0 ALA A:322 A:322 4.0 0.035 T -80.3 134.7
af-p19961-f1 1 P19961 97.46 0.0 ALA A:322 A:322 10.0 0.087 T -56.8 126.8
af-p04746-f1 1 P04746 96.87 0.0 ALA A:322 A:322 8.0 0.07 S -84.8 149.5