Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 104297213 . G A CCDS30784.1:NM_001008219.1:c.971gGa>gAa_NP_001008220.1:p.324G>E Homo sapiens amylase, alpha 1C (salivary) (AMY1C), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1c8q 1 P04745 99.8 0.0 X-RAY
2001-06-13 GLY A:309 A:309 39.0 0.52 144.0 -172.2 39.0 0.52 0.0 HOH
3.206
CA
O
1mfv 1 P04745 99.8 0.0 X-RAY
2002-11-20 GLY A:309 A:309 51.0 0.68 115.5 128.4 51.0 0.68 0.0 GLC
HOH
8.487
2.806
N
O
O1
O
1smd 1 P04745 99.8 0.0 X-RAY
1996-07-11 GLY A:309 A:309 37.0 0.493 G 47.3 -126.8 37.0 0.493 0.0 HOH
3.095
O
O
1xv8 1 P04745 99.8 0.0 X-RAY
2005-10-11 GLY A:309 A:309 22.0 0.293 G 90.7 -158.2 22.0 0.293 0.0 HOH
4.086
C
O
GLY B:309 B:309 22.0 0.293 G 90.7 -158.1 22.0 0.293 0.0 HOH
4.086
C
O
1q4n 1 P04745 99.6 0.0 X-RAY
2004-03-16 GLY A:309 X:309 50.0 0.667 G 59.8 -134.7 50.0 0.667 0.0 HOH
2.520
O
O
1z32 1 P04745 99.6 0.0 X-RAY
2005-05-31 GLY A:309 X:309 49.0 0.653 114.6 124.8 49.0 0.653 0.0 HOH
2.831
O
O
1jxj 1 P04745 99.6 0.0 X-RAY
2001-09-14 GLY A:309 A:309 21.0 0.28 G 50.3 -137.1 21.0 0.28 0.0 HOH
2.726
O
O
1nm9 1 P04745 99.6 0.0 X-RAY
2004-01-20 GLY A:309 A:309 53.0 0.707 78.5 -169.6 53.0 0.707 0.0 GLC
HOH
8.285
2.879
N
O
O1
O
3blk 1 P04745 99.6 0.0 X-RAY
2008-11-25 GLY A:309 A:309 51.0 0.68 113.1 126.2 51.0 0.68 0.0 GLC
HOH
8.582
2.957
N
O
O1
O
3blp 1 P04745 99.6 0.0 X-RAY
2008-11-18 GLY A:309 X:309 52.0 0.693 108.5 126.8 52.0 0.693 0.0 GLC
HOH
8.565
2.850
N
O
O1
O
3dhp 1 P04745 98.59 0.0 X-RAY
2008-07-01 GLY A:309 A:309 50.0 0.667 114.9 124.1 50.0 0.667 0.0 GLC
HOH
8.610
2.786
N
N
O1
O
3old 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:309 A:309 53.0 0.707 87.7 -177.6 53.0 0.707 0.0 GLC
GLC
MPD
HOH
5.568
9.501
9.016
2.927
N
N
N
O
O1
C5
C5
O
3ole 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:309 A:309 55.0 0.733 86.7 -172.0 55.0 0.733 0.0 GLC
GLC
MPD
HOH
5.662
9.417
9.001
2.850
N
N
N
O
O1
C5
C5
O
3olg 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:309 A:309 62.0 0.827 91.3 175.3 62.0 0.827 0.0 BGC
GLC
HOH
5.900
9.651
3.026
CA
N
O
O1
C5
O
3oli 1 P04746 97.38 0.0 X-RAY
2011-04-13 GLY A:309 A:309 50.0 0.667 113.1 125.1 50.0 0.667 0.0 GLC
GLC
HOH
6.228
9.376
2.892
CA
N
O
O1
C5
O
6z8l 1 P04746 97.18 0.0 X-RAY
2020-12-02 GLY A:309 A:309 49.0 0.653 109.9 123.7 49.0 0.653 0.0 GLC
GLC
HOH
9.687
7.293
1.992
H
H
H
H61
H62
O
1b2y 1 P04746 97.18 0.0 X-RAY
2000-02-16 GLY A:309 A:309 55.0 0.733 G 79.9 -151.5 55.0 0.733 0.0 BGC
HOH
8.983
6.929
N
O
O6
O
1bsi 1 P04746 96.98 0.0 X-RAY
1999-05-18 GLY A:309 A:309 35.0 0.467 G 56.6 -113.1 35.0 0.467 0.0 HOH
2.758
O
O
1cpu 1 P04746 96.98 0.0 X-RAY
1999-06-14 GLY A:309 A:309 56.0 0.747 G 71.9 -149.3 56.0 0.747 0.0 GLC
HOH
8.407
2.720
N
O
O1
O
1hny 1 P04746 96.98 0.0 X-RAY
1996-03-08 GLY A:309 A:309 23.0 0.307 G 68.1 -139.1 23.0 0.307 0.0 HOH
2.628
O
O
1u2y 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLY A:309 A:309 54.0 0.72 G 71.5 -147.7 54.0 0.72 0.0 HOH
2.734
O
O
1u30 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLY A:309 A:309 57.0 0.76 G 74.3 -148.6 57.0 0.76 0.0 GOX
HOH
9.974
2.821
N
O
O4
O
1u33 1 P04746 96.98 0.0 X-RAY
2004-09-07 GLY A:309 A:309 57.0 0.76 G 80.9 -164.0 57.0 0.76 0.0 HOH
2.846
O
O
1xcw 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:309 A:309 59.0 0.787 G 78.5 -155.4 59.0 0.787 0.0 GLC
HOH
8.081
2.658
N
O
O1
O
1xcx 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:309 A:309 50.0 0.667 G 70.1 -150.4 50.0 0.667 0.0 BGC
GLC
HOH
7.181
9.272
2.691
N
N
O
C6
C5
O
1xd0 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:309 A:309 59.0 0.787 G 74.7 -152.9 59.0 0.787 0.0 ARE
HOH
8.145
3.250
N
N
O1G
O
1xd1 1 P04746 96.98 0.0 X-RAY
2004-12-07 GLY A:309 A:309 56.0 0.747 G 67.7 -135.7 56.0 0.747 0.0 6SA
HOH
4.885
4.659
CA
O
OW2
O
2qmk 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:309 A:309 41.0 0.547 T 65.6 -128.3 41.0 0.547 0.0 HOH
5.569
N
O
2qv4 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:309 A:309 37.0 0.493 G 63.2 -128.5 37.0 0.493 0.0 HOH
2.596
O
O
3bai 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:309 A:309 39.0 0.52 G 60.8 -130.8 39.0 0.52 0.0 HOH
2.701
O
O
3baj 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:309 A:309 46.0 0.613 G 63.7 -143.7 46.0 0.613 0.0 ARE
HOH
8.455
2.610
N
O
O1G
O
3baw 1 P04746 96.98 0.0 X-RAY
2008-03-25 GLY A:309 A:309 52.0 0.693 G 74.9 -153.9 52.0 0.693 0.0 HOH
2.742
O
O
3ij7 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLY A:309 A:309 49.0 0.653 G 81.3 -152.5 49.0 0.653 0.0 HOH
2.657
O
O
3ij8 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLY A:309 A:309 43.0 0.573 G 71.8 -145.1 43.0 0.573 0.0 B0D
HOH
9.039
2.709
N
O
O6
O
3ij9 1 P04746 96.98 0.0 X-RAY
2009-10-27 GLY A:309 A:309 46.0 0.613 G 79.5 -150.2 46.0 0.613 0.0 HOH
2.583
O
O
4gqq 1 P04746 96.98 0.0 X-RAY
2012-10-24 GLY A:309 A:309 22.0 0.293 -82.7 140.5 22.0 0.293 0.0 HOH
7.782
O
O
4gqr 1 P04746 96.98 0.0 X-RAY
2012-10-24 GLY A:309 A:309 24.0 0.32 G 65.7 -140.0 24.0 0.32 0.0 HOH
2.585
O
O
4w93 1 P04746 96.98 0.0 X-RAY
2015-07-15 GLY A:309 A:309 28.0 0.373 G 45.1 -137.8 28.0 0.373 0.0 3L9
HOH
8.875
2.771
N
O
O25
O
4x9y 1 P04746 96.98 0.0 X-RAY
2014-12-31 GLY A:309 A:309 22.0 0.293 G 47.8 -127.5 22.0 0.293 0.0 HOH
2.782
O
O
5e0f 1 P04746 96.98 0.0 X-RAY
2016-09-07 GLY A:309 A:309 28.0 0.373 G 51.1 -131.1 28.0 0.373 0.0 5J7
HOH
7.562
2.886
H
O
H04
O
5emy 1 P04746 96.98 0.0 X-RAY
2016-07-06 GLY A:309 A:309 49.0 0.653 109.6 120.1 49.0 0.653 0.0 HOH
2.576
HA3
O
5kez 1 P04746 96.98 0.0 X-RAY
2017-03-29 GLY A:309 A:309 23.0 0.307 G 56.4 -128.4 23.0 0.307 0.0 HOH
2.928
O
O
5u3a 1 P04746 96.98 0.0 X-RAY
2017-12-06 GLY A:309 A:309 23.0 0.307 G 51.0 -133.6 23.0 0.307 0.0 HOH
2.804
O
O
5va9 1 P04746 96.98 0.0 X-RAY
2018-03-28 GLY A:309 A:309 24.0 0.32 G 57.4 -134.1 24.0 0.32 0.0 HOH
2.652
O
O
GLY B:309 B:309 22.0 0.293 G 57.3 -134.9 NA NA NA
6obx 1 P04746 96.98 0.0 X-RAY
2020-02-12 GLY A:309 A:309 22.0 0.293 G 49.5 -133.5 22.0 0.293 0.0 ZXU
HOH
7.871
2.652
H
HA3
H23
O
6ocn 1 P04746 96.98 0.0 X-RAY
2020-02-12 GLY A:309 A:309 22.0 0.293 G 49.6 -132.6 22.0 0.293 0.0 ZXY
HOH
8.200
2.647
H
HA3
H23
O
1kgw 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLY A:309 A:309 45.0 0.6 G 83.2 -136.5 45.0 0.6 0.0 HOH
5.137
O
O
1xgz 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:309 A:309 29.0 0.387 G 52.0 -126.0 29.0 0.387 0.0 HOH
2.893
O
O
1xh0 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:309 A:309 43.0 0.573 G 57.6 -139.3 43.0 0.573 0.0 AAO
HOH
5.551
2.741
N
O
O1T
O
1xh1 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:309 A:309 41.0 0.547 G 68.1 -137.4 41.0 0.547 0.0 HOH
3.017
O
O
1xh2 1 P04746 96.77 0.0 X-RAY
2005-05-24 GLY A:309 A:309 43.0 0.573 G 68.0 -131.4 43.0 0.573 0.0 ARE
HOH
8.554
2.133
N
N
O1G
O
3bak 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLY A:309 A:309 41.0 0.547 G 69.7 -129.0 41.0 0.547 0.0 HOH
2.931
O
O
3bax 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLY A:309 A:309 48.0 0.64 G 65.9 -138.3 48.0 0.64 0.0 HOH
2.653
O
O
3bay 1 P04746 96.77 0.0 X-RAY
2008-03-25 GLY A:309 A:309 39.0 0.52 T 58.0 -106.9 39.0 0.52 0.0 ARE
HOH
8.810
7.115
N
O
O1G
O
1kgx 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLY A:309 A:309 45.0 0.6 T 76.8 -137.7 45.0 0.6 0.0 HOH
4.061
N
O
2cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 GLY A:309 A:309 38.0 0.507 G 70.1 -134.7 38.0 0.507 0.0 HOH
2.746
O
O
3cpu 1 P04746 96.77 0.0 X-RAY
2001-06-30 GLY A:309 A:309 50.0 0.667 T 85.6 -146.4 50.0 0.667 0.0 HOH
2.441
O
O
5td4 1 P04746 96.77 0.0 X-RAY
2016-11-02 GLY A:309 A:309 60.0 0.8 G 77.0 -161.1 60.0 0.8 0.0 GLC
HOH
8.353
2.718
N
O
O1
O
1kgu 1 P04746 96.77 0.0 X-RAY
2002-01-16 GLY A:309 A:309 40.0 0.533 T 62.8 -108.3 40.0 0.533 0.0 HOH
5.801
O
O
1kb3 1 P04746 96.77 0.0 X-RAY
2002-05-01 GLY A:309 A:309 45.0 0.6 T 76.1 -138.6 45.0 0.6 0.0 HOH
2.655
O
O
1kbb 1 P04746 96.77 0.0 X-RAY
2002-04-10 GLY A:309 A:309 37.0 0.493 G 80.6 -153.8 37.0 0.493 0.0 HOH
5.971
N
O
1kbk 1 P04746 96.77 0.0 X-RAY
2002-04-10 GLY A:309 A:309 36.0 0.48 G 68.9 -139.5 36.0 0.48 0.0 HOH
2.855
O
O
1kxq 1 P00690 86.29 0.0 X-RAY
2002-06-19 GLY A:309 A:309 21.0 0.28 G 50.9 -133.5 21.0 0.28 0.0 HOH
2.822
O
O
GLY B:309 B:309 21.0 0.28 G 54.6 -137.2 NA NA NA
GLY C:309 C:309 23.0 0.307 G 51.5 -139.0 NA NA NA
GLY D:309 D:309 23.0 0.307 G 51.6 -134.8 NA NA NA
1kxt 1 P00690 86.29 0.0 X-RAY
2002-06-19 GLY A:309 A:309 32.0 0.427 G 55.2 -148.1 10.0 0.133 0.294 B:None:0.293
HOH
2.823
N
O
GLY C:309 C:309 24.0 0.32 G 82.2 -146.1 NA NA NA
GLY E:309 E:309 28.0 0.373 G 70.5 -150.2 NA NA NA
1kxv 1 P00690 86.29 0.0 X-RAY
2002-06-19 GLY A:309 A:309 24.0 0.32 G 52.7 -138.8 24.0 0.32 0.0 HOH
2.910
O
O
GLY B:309 B:309 24.0 0.32 G 49.4 -134.4 NA NA NA
1dhk 1 P00690 86.29 0.0 X-RAY
1997-12-24 GLY A:309 A:309 76.0 1.0 80.7 -6.4 33.0 0.44 0.56 B:P02873:0.573
HOH
1.853
O
H2
1ppi 1 P00690 86.29 0.0 X-RAY
1995-05-24 GLY A:309 A:309 54.0 0.72 G 70.1 -153.5 54.0 0.72 0.0 BGC
HOH
9.004
2.789
N
O
C1
O
1vah 1 P00690 86.09 0.0 X-RAY
2005-04-26 GLY A:309 A:309 24.0 0.32 G 65.1 -133.5 24.0 0.32 0.0 HOH
2.648
O
O
3l2l 1 P00690 86.09 0.0 X-RAY
2010-04-14 GLY A:309 A:309 21.0 0.28 G 58.8 -132.4 21.0 0.28 0.0 GLC
HOH
9.983
2.737
H
O
HO2
O
3l2m 1 P00690 86.09 0.0 X-RAY
2010-04-14 GLY A:309 A:309 24.0 0.32 G 58.2 -135.0 24.0 0.32 0.0 GLC
HOH
8.447
2.654
H
HA3
HO2
O
1ua3 1 P00690 86.09 0.0 X-RAY
2003-10-14 GLY A:309 A:309 23.0 0.307 G 54.3 -136.4 23.0 0.307 0.0 HOH
2.843
O
O
1ose 1 P00690 85.89 0.0 X-RAY
1997-04-01 GLY A:309 A:309 55.0 0.733 G 79.0 -151.8 55.0 0.733 0.0 BGC
HOH
8.799
2.917
N
O
O6
O
1jfh 1 P00690 86.09 0.0 X-RAY
1998-12-02 GLY A:309 A:309 52.0 0.693 111.4 127.2 52.0 0.693 0.0 MA1
HOH
7.772
2.793
N
O
S1
O
1hx0 1 P00690 85.89 0.0 X-RAY
2001-08-08 GLY A:309 A:309 49.0 0.653 G 65.8 -153.8 49.0 0.653 0.0 GLC
BGC
EDO
HOH
8.054
9.110
3.807
2.848
N
N
O
O
O1
O6
C1
O
1wo2 1 P00690 85.89 0.0 X-RAY
2005-03-15 GLY A:309 A:309 22.0 0.293 G 56.5 -135.3 22.0 0.293 0.0 HOH
2.757
O
O
1pif 1 P00690 85.69 0.0 X-RAY
1996-12-07 GLY A:309 A:309 24.0 0.32 G 58.7 -136.2 24.0 0.32 0.0 HOH
2.764
O
O
1pig 1 P00690 85.69 0.0 X-RAY
1996-12-07 GLY A:309 A:309 54.0 0.72 G 74.7 -145.5 54.0 0.72 0.0 BGC
GLC
HOH
6.651
9.488
2.743
N
N
O
O5
C5
O
4x0n 1 P00690 85.69 0.0 X-RAY
2015-11-25 GLY A:309 A:309 27.0 0.36 G 67.3 -150.7 7.0 0.093 0.267 B:None:0.267
GOL
HOH
7.677
4.728
O
C
O1
O
1bvn 1 P00690 85.48 0.0 X-RAY
1998-09-23 GLY A:309 P:309 23.0 0.307 T 60.0 -123.1 2.0 0.027 0.28 B:P01092:0.28
HOH
3.257
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dte7-f1 1 P0DTE7 100.0 0.0 GLY A:324 A:324 29.0 0.387 G 52.8 -134.4
af-p0dte8-f1 1 P0DTE8 100.0 0.0 GLY A:324 A:324 28.0 0.373 G 52.8 -133.5
af-p0dub6-f1 1 P0DUB6 100.0 0.0 GLY A:324 A:324 31.0 0.413 G 53.0 -138.4
af-p19961-f1 1 P19961 97.46 0.0 GLY A:324 A:324 23.0 0.307 G 52.5 -134.3
af-p04746-f1 1 P04746 96.87 0.0 GLY A:324 A:324 38.0 0.507 G 53.2 -141.0