Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 153598864 . G A CCDS30874.1:NM_001024210.1:c.85Cgg>Tgg_NP_001019381.1:p.29R>W Homo sapiens S100 calcium binding protein A13 (S100A13), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2h2k 1 Q99584 100.0 4e-67 X-RAY
 2007-05-22 ARG A:37 A:29 191.0 0.849 S -57.1 132.5 191.0 0.849 0.0 CA
HOH
 2.314
2.578
 O
NH1
 CA
O
ARG B:37 B:29 150.0 0.667 S -60.2 129.3 150.0 0.667 0.0 CA
CA
HOH
 2.257
7.594
2.546
 O
NH1
NH2
 CA
CA
O
2egd 1 Q99584 100.0 9e-67 X-RAY
 2008-03-11 ARG A:29 A:29 97.0 NA -65.4 135.8 97.0 NA NA CA
HOH
 2.469
3.489
 O
O
 CA
O
ARG B:29 B:29 123.0 0.547 S -57.7 127.2 123.0 0.547 0.0 CA
CA
HOH
 2.427
6.606
3.308
 O
NH1
O
 CA
CA
O
2k8m 2 Q99584 100.0 9e-67 NMR
 2009-03-17 ARG B:29 B:29 173.0 0.769 63.9 71.8 173.0 0.769 0.0
ARG C:29 C:29 114.0 0.507 69.2 124.3 114.0 0.507 0.0
2ki4 2 Q99584 100.0 9e-67 NMR
 2010-03-09 ARG B:29 B:29 175.0 0.778 S 73.5 121.1 172.0 0.764 0.014 A:P05230:0.013
2ki4 3 Q99584 100.0 9e-67 NMR
 2010-03-09 ARG C:29 C:29 160.0 0.711 52.0 106.7 160.0 0.711 0.0
2ki6 3 Q99584 100.0 9e-67 NMR
 2010-03-09 ARG C:29 C:29 175.0 0.778 S 73.5 121.1 172.0 0.764 0.014 B:P05230:0.013
2ki6 4 Q99584 100.0 9e-67 NMR
 2010-03-09 ARG D:29 D:29 160.0 0.711 52.0 106.7 160.0 0.711 0.0
2kot 1 Q99584 100.0 9e-67 NMR
 2010-03-09 ARG A:29 A:29 176.0 0.782 64.9 137.0 176.0 0.782 0.0 ANW
 7.364
 C
 HAJ
ARG B:29 B:29 150.0 0.667 61.4 114.9 150.0 0.667 0.0 ANW
 6.409
 C
 HNAA
2l5x 2 Q99584 100.0 9e-67 NMR
 2011-01-26 ARG B:29 B:29 110.0 0.489 64.3 96.0 1.0 0.004 0.485 A:P01583:0.484
ARG C:29 C:29 106.0 0.471 64.2 93.4 1.0 0.004 0.467 D:P01583:0.467
2le9 2 Q99584 100.0 7e-66 NMR
 2012-06-27 ARG B:28 B:29 141.0 0.627 63.0 66.8 16.0 0.071 0.556 A:Q15109:0.556
ARG C:28 C:29 174.0 0.773 S 69.3 76.2 106.0 0.471 0.302 D:Q15109:0.302

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q99584-f1 1 Q99584 100.0 4e-67 ARG A:29 A:29 122.0 0.542 -95.5 103.8