Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 158151418 | . | C | A | CCDS1173.1:NM_001766.3:c.235Cag>Aag_NP_001757.1:p.79Q>K | Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1zt4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2005-07-19 | GLN | A:61 | A:61 | 149.0 | 0.828 | H | -86.3 | -44.1 | 149.0 | 0.828 | 0.0 | ||||||
GLN | C:61 | C:61 | 139.0 | 0.772 | H | -54.8 | -55.6 | NA | NA | NA | |||||||||||||
6v7y | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | GLN | A:58 | A:58 | 159.0 | 0.883 | H | -76.6 | -32.3 | 63.0 | 0.35 | 0.533 |
C:None:0.533 |
HOH |
3.948 |
NE2 |
O |
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6v7z | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | GLN | A:58 | A:61 | 71.0 | NA | H | -68.6 | -33.6 | 71.0 | NA | NA | ||||||
GLN | C:58 | C:61 | 151.0 | 0.839 | H | -67.6 | -34.6 | NA | NA | NA | |||||||||||||
6v80 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | GLN | A:58 | A:61 | 57.0 | NA | H | -109.7 | -33.9 | 28.0 | NA | NA |
E:None:NA |
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GLN | F:58 | F:61 | 132.0 | 0.733 | H | -85.3 | -16.4 | NA | NA | NA | |||||||||||||
4wwk | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | GLN | C:62 | C:61 | 143.0 | 0.794 | H | -66.2 | -47.3 | 84.0 | 0.467 | 0.327 |
B:None:0.244 A:None:0.078 |
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3huj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2009-07-28 | GLN | A:62 | A:61 | 144.0 | 0.8 | H | -67.9 | -38.8 | 144.0 | 0.8 | 0.0 |
HOH |
9.230 |
NE2 |
O |
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GLN | C:62 | C:61 | 128.0 | 0.711 | H | -62.4 | -40.4 | NA | NA | NA | |||||||||||||
3vwj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | GLN | A:62 | A:61 | 91.0 | NA | H | -89.5 | 4.9 | 91.0 | NA | NA | ||||||
3vwk | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | GLN | A:62 | A:61 | 75.0 | NA | H | -64.9 | -41.9 | 75.0 | NA | NA | ||||||
4ww2 | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | GLN | C:62 | C:61 | 134.0 | 0.744 | H | -70.5 | -45.9 | 71.0 | 0.394 | 0.35 |
A:None:0.35 |
HOH |
3.173 |
N |
O |
|
4en3 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2012-10-31 | GLN | A:62 | C:61 | 134.0 | 0.744 | H | -61.2 | -36.9 | 134.0 | 0.744 | 0.0 | ||||||
3sdx | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2011-10-05 | GLN | A:56 | A:61 | 138.0 | 0.767 | T | -87.2 | -33.9 | 138.0 | 0.767 | 0.0 | ||||||
GLN | F:56 | C:61 | 157.0 | 0.872 | H | -78.0 | -42.7 | NA | NA | NA | |||||||||||||
2po6 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2007-07-03 | GLN | A:56 | A:61 | 145.0 | 0.806 | H | -78.9 | -29.7 | 145.0 | 0.806 | 0.0 | ||||||
GLN | E:56 | E:61 | 135.0 | 0.75 | H | -71.2 | -40.4 | NA | NA | NA | |||||||||||||
4lhu | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2013-10-02 | GLN | A:56 | A:61 | 152.0 | 0.844 | H | -66.8 | -43.1 | 64.0 | 0.356 | 0.488 |
D:None:0.25 C:None:0.333 |
HOH |
3.107 |
N |
O |
|
4wo4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2014-11-26 | GLN | A:56 | A:61 | 69.0 | NA | H | -72.4 | -48.6 | 69.0 | NA | NA |
HOH |
3.144 |
N |
O |
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3u0p | 1 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | GLN | A:62 | A:61 | 162.0 | 0.9 | H | -54.5 | -60.6 | 162.0 | 0.9 | 0.0 | ||||||
GLN | C:62 | C:61 | 139.0 | 0.772 | H | -86.3 | -9.6 | NA | NA | NA | |||||||||||||
GLN | E:62 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3tzv | 3 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | GLN | C:60 | C:61 | 132.0 | 0.733 | H | -66.0 | -68.7 | 132.0 | 0.733 | 0.0 | ||||||
4mng | 2 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | GLN | B:62 | A:61 | 68.0 | NA | H | -64.8 | -43.0 | 68.0 | NA | NA | ||||||
GLN | D:62 | C:61 | 156.0 | 0.867 | H | -65.2 | -42.6 | NA | NA | NA | |||||||||||||
4mq7 | 1 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | GLN | A:62 | A:61 | 137.0 | 0.761 | H | -78.2 | -37.2 | 137.0 | 0.761 | 0.0 |
HOH |
8.720 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15813-f1 | 1 | P15813 | 100.0 | 0.0 | GLN | A:79 | A:79 | 139.0 | 0.772 | H | -64.4 | -41.9 |