Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 158151950 | . | C | A | CCDS1173.1:NM_001766.3:c.457Caa>Aaa_NP_001757.1:p.153Q>K | Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1zt4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2005-07-19 | GLN | A:135 | A:135 | 189.0 | 1.0 | S | -28.8 | -85.8 | 189.0 | 1.0 | 0.0 | ||||||
GLN | C:135 | C:135 | 190.0 | 1.0 | S | -49.9 | -63.1 | NA | NA | NA | |||||||||||||
6v7y | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | GLN | A:132 | A:132 | 210.0 | 1.0 | S | -58.2 | -43.4 | 210.0 | 1.0 | 0.0 |
HOH |
3.386 |
N |
O |
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6v7z | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | GLN | A:132 | A:135 | 187.0 | 1.0 | T | -59.0 | -42.8 | 84.0 | 0.467 | 0.533 |
F:None:0.572 |
HOH |
2.649 |
O |
O |
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GLN | C:132 | C:135 | 170.0 | 0.944 | T | -56.3 | -45.2 | NA | NA | NA | |||||||||||||
6v80 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | GLN | A:132 | A:135 | 115.0 | NA | T | -63.0 | -17.5 | 115.0 | NA | NA | ||||||
GLN | F:132 | F:135 | 193.0 | 1.0 | S | -56.9 | -40.6 | NA | NA | NA | |||||||||||||
4wwk | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | GLN | C:136 | C:135 | 118.0 | NA | T | -60.5 | -41.3 | 118.0 | NA | NA | ||||||
3huj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2009-07-28 | GLN | A:136 | A:135 | 204.0 | 1.0 | T | -54.0 | -40.8 | 204.0 | 1.0 | 0.0 |
HOH |
3.132 |
N |
O |
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GLN | C:136 | C:135 | 204.0 | 1.0 | S | -46.0 | -45.8 | NA | NA | NA | |||||||||||||
3vwj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | GLN | A:136 | A:135 | 112.0 | NA | T | -60.4 | -58.4 | 112.0 | NA | NA | ||||||
3vwk | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | GLN | A:136 | A:135 | 119.0 | NA | T | -46.9 | -39.0 | 119.0 | NA | NA | ||||||
4ww2 | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | GLN | C:136 | C:135 | 119.0 | NA | S | -40.9 | -55.1 | 119.0 | NA | NA |
HOH |
4.437 |
C |
O |
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4en3 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2012-10-31 | GLN | A:136 | C:135 | 205.0 | 1.0 | S | -48.9 | -43.4 | 205.0 | 1.0 | 0.0 | ||||||
3sdx | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2011-10-05 | GLN | A:130 | A:135 | 190.0 | 1.0 | T | -49.2 | 98.0 | 190.0 | 1.0 | 0.0 | ||||||
GLN | F:130 | C:135 | 189.0 | 1.0 | T | -48.3 | 100.4 | NA | NA | NA | |||||||||||||
2po6 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2007-07-03 | GLN | A:130 | A:135 | 206.0 | 1.0 | T | -53.9 | -45.4 | 206.0 | 1.0 | 0.0 | ||||||
GLN | E:130 | E:135 | 183.0 | 1.0 | S | 1.9 | -101.5 | NA | NA | NA | |||||||||||||
4lhu | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2013-10-02 | GLN | A:130 | A:135 | 195.0 | 1.0 | S | -46.0 | -56.3 | 195.0 | 1.0 | 0.0 |
HOH |
2.906 |
NE2 |
O |
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4wo4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2014-11-26 | GLN | A:130 | A:135 | 114.0 | NA | T | -44.2 | -59.6 | 114.0 | NA | NA |
HOH |
5.730 |
N |
O |
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3u0p | 1 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | GLN | A:136 | A:135 | 209.0 | 1.0 | T | -59.2 | -34.7 | 209.0 | 1.0 | 0.0 |
HOH |
7.693 |
N |
O |
||
GLN | C:136 | C:135 | 207.0 | 1.0 | T | -60.5 | -33.5 | NA | NA | NA | |||||||||||||
GLN | E:136 | E:135 | 204.0 | 1.0 | T | -45.9 | -58.8 | NA | NA | NA | |||||||||||||
3tzv | 3 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | GLN | C:134 | C:135 | 115.0 | NA | T | -65.2 | -10.1 | 115.0 | NA | NA | ||||||
4mng | 2 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | GLN | B:136 | A:135 | 202.0 | 1.0 | S | -60.3 | -42.1 | 202.0 | 1.0 | 0.0 | ||||||
GLN | D:136 | C:135 | 204.0 | 1.0 | S | -60.7 | -42.9 | NA | NA | NA | |||||||||||||
4mq7 | 1 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | GLN | A:136 | A:135 | 121.0 | NA | S | -56.8 | -44.4 | 121.0 | NA | NA |
HOH |
8.159 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15813-f1 | 1 | P15813 | 100.0 | 0.0 | GLN | A:153 | A:153 | 208.0 | 1.0 | T | -59.9 | -31.4 |