Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 158151956 | . | G | A | CCDS1173.1:NM_001766.3:c.463Gcc>Acc_NP_001757.1:p.155A>T | Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1zt4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2005-07-19 | ALA | A:137 | A:137 | 17.0 | 0.148 | 175.6 | 97.3 | 17.0 | 0.148 | 0.0 | |||||||
ALA | C:137 | C:137 | 8.0 | 0.07 | -19.7 | 136.7 | NA | NA | NA | ||||||||||||||
6v7y | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | ALA | A:134 | A:134 | 16.0 | 0.139 | -15.0 | 127.6 | 16.0 | 0.139 | 0.0 |
HOH |
7.404 |
N |
O |
|||
6v7z | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | ALA | A:134 | A:137 | 19.0 | 0.165 | -83.8 | 137.8 | 9.0 | 0.078 | 0.087 |
F:None:0.087 |
HOH |
5.163 |
N |
O |
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ALA | C:134 | C:137 | 18.0 | 0.157 | -84.1 | 138.0 | NA | NA | NA | ||||||||||||||
6v80 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | ALA | A:134 | A:137 | 24.0 | 0.209 | -102.5 | 152.7 | 24.0 | 0.209 | 0.0 | |||||||
ALA | F:134 | F:137 | 43.0 | 0.374 | -138.8 | -171.2 | NA | NA | NA | ||||||||||||||
4wwk | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | ALA | C:138 | C:137 | 15.0 | 0.13 | -68.2 | 145.7 | 15.0 | 0.13 | 0.0 | |||||||
3huj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2009-07-28 | ALA | A:138 | A:137 | 23.0 | 0.2 | -78.7 | 147.3 | 23.0 | 0.2 | 0.0 |
HOH |
4.367 |
N |
O |
|||
ALA | C:138 | C:137 | 19.0 | 0.165 | -14.7 | 132.7 | NA | NA | NA | ||||||||||||||
3vwj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | ALA | A:138 | A:137 | 24.0 | 0.209 | -71.8 | 142.8 | 24.0 | 0.209 | 0.0 | |||||||
3vwk | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | ALA | A:138 | A:137 | 31.0 | 0.27 | -102.9 | 151.9 | 31.0 | 0.27 | 0.0 | |||||||
4ww2 | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | ALA | C:138 | C:137 | 28.0 | 0.243 | -137.2 | 134.3 | 28.0 | 0.243 | 0.0 |
HOH |
4.783 |
N |
O |
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4en3 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2012-10-31 | ALA | A:138 | C:137 | 26.0 | 0.226 | -138.7 | 129.2 | 26.0 | 0.226 | 0.0 | |||||||
3sdx | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2011-10-05 | ALA | A:132 | A:137 | 21.0 | 0.183 | -63.7 | 150.0 | 21.0 | 0.183 | 0.0 |
HOH |
7.153 |
CA |
O |
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ALA | F:132 | C:137 | 22.0 | 0.191 | -63.4 | 149.3 | NA | NA | NA | ||||||||||||||
2po6 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2007-07-03 | ALA | A:132 | A:137 | 20.0 | 0.174 | -62.3 | 143.1 | 20.0 | 0.174 | 0.0 | |||||||
ALA | E:132 | E:137 | 26.0 | 0.226 | -149.4 | 128.9 | NA | NA | NA | ||||||||||||||
4lhu | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2013-10-02 | ALA | A:132 | A:137 | 26.0 | 0.226 | -97.5 | 105.3 | 26.0 | 0.226 | 0.0 | |||||||
4wo4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2014-11-26 | ALA | A:132 | A:137 | 24.0 | 0.209 | -120.1 | 145.4 | 24.0 | 0.209 | 0.0 |
HOH |
6.553 |
CA |
O |
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3u0p | 1 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | ALA | A:138 | A:137 | 12.0 | 0.104 | -35.5 | 127.2 | 12.0 | 0.104 | 0.0 | |||||||
ALA | C:138 | C:137 | 18.0 | 0.157 | -66.4 | 142.5 | NA | NA | NA | ||||||||||||||
ALA | E:138 | E:137 | 20.0 | 0.174 | -113.0 | 163.5 | NA | NA | NA | ||||||||||||||
3tzv | 3 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | ALA | C:136 | C:137 | 16.0 | 0.139 | S | -76.2 | 132.0 | 16.0 | 0.139 | 0.0 |
LSC |
8.775 |
CB |
C2 |
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4mng | 2 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | ALA | B:138 | A:137 | 32.0 | 0.278 | -149.6 | 148.6 | 32.0 | 0.278 | 0.0 | |||||||
ALA | D:138 | C:137 | 32.0 | 0.278 | -149.8 | 148.6 | NA | NA | NA | ||||||||||||||
4mq7 | 1 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | ALA | A:138 | A:137 | 31.0 | 0.27 | -155.0 | 136.2 | 31.0 | 0.27 | 0.0 |
HOH |
8.504 |
N |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15813-f1 | 1 | P15813 | 100.0 | 0.0 | ALA | A:155 | A:155 | 22.0 | 0.191 | -65.1 | 136.4 |