Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 158152883 | . | G | A | CCDS1173.1:NM_001766.3:c.823Gct>Act_NP_001757.1:p.275A>T | Homo sapiens CD1d molecule (CD1D), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1zt4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2005-07-19 | ALA | A:257 | A:257 | 70.0 | 0.609 | S | -87.3 | 160.6 | 70.0 | 0.609 | 0.0 | ||||||
ALA | C:257 | C:257 | 67.0 | 0.583 | T | -88.3 | 160.1 | NA | NA | NA | |||||||||||||
6v7y | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | ALA | A:254 | A:254 | 62.0 | 0.539 | -129.4 | 33.6 | 62.0 | 0.539 | 0.0 |
HOH |
3.445 |
N |
O |
|||
6v7z | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | ALA | A:254 | A:257 | 72.0 | 0.626 | T | -61.6 | 129.7 | 72.0 | 0.626 | 0.0 | ||||||
ALA | C:254 | C:257 | 86.0 | 0.748 | -144.1 | 173.4 | NA | NA | NA | ||||||||||||||
6v80 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2020-09-16 | ALA | A:254 | A:257 | 66.0 | 0.574 | T | -76.7 | 128.2 | 66.0 | 0.574 | 0.0 | ||||||
ALA | F:254 | F:257 | 59.0 | 0.513 | S | -82.1 | 80.6 | NA | NA | NA | |||||||||||||
4wwk | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | ALA | C:258 | C:257 | 71.0 | 0.617 | T | -69.0 | 134.1 | 71.0 | 0.617 | 0.0 | ||||||
3huj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2009-07-28 | ALA | A:258 | A:257 | 56.0 | 0.487 | 61.9 | 91.8 | 56.0 | 0.487 | 0.0 |
HOH |
2.711 |
O |
O |
|||
ALA | C:258 | C:257 | 79.0 | 0.687 | S | -156.5 | 118.5 | NA | NA | NA | |||||||||||||
3vwj | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | ALA | A:258 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
3vwk | 1 | P15813 | 99.28 | 0.0 |
X-RAY |
2012-10-03 | ALA | A:258 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
4ww2 | 3 | P15813 | 99.28 | 0.0 |
X-RAY |
2016-02-03 | ALA | C:258 | C:257 | 70.0 | 0.609 | T | -67.2 | 139.6 | 70.0 | 0.609 | 0.0 |
HOH |
6.673 |
N |
O |
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4en3 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2012-10-31 | ALA | A:258 | C:257 | 113.0 | 0.983 | 360.0 | 86.0 | 113.0 | 0.983 | 0.0 | |||||||
3sdx | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2011-10-05 | ALA | A:252 | A:257 | 58.0 | 0.504 | S | -55.3 | 151.7 | 58.0 | 0.504 | 0.0 | ||||||
ALA | F:252 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
2po6 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2007-07-03 | ALA | A:252 | A:257 | 72.0 | 0.626 | T | -62.8 | 117.7 | 72.0 | 0.626 | 0.0 | ||||||
ALA | E:252 | E:257 | 86.0 | 0.748 | T | -69.2 | 130.1 | NA | NA | NA | |||||||||||||
4lhu | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2013-10-02 | ALA | A:252 | A:257 | 71.0 | 0.617 | T | -69.3 | 130.0 | 71.0 | 0.617 | 0.0 |
HOH |
5.744 |
C |
O |
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4wo4 | 1 | P15813 | 100.0 | 0.0 |
X-RAY |
2014-11-26 | ALA | A:252 | A:257 | 53.0 | 0.461 | T | -64.3 | 129.0 | 53.0 | 0.461 | 0.0 |
HOH |
3.805 |
C |
O |
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3u0p | 1 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | ALA | A:258 | A:257 | 74.0 | 0.643 | T | -58.3 | 124.9 | 74.0 | 0.643 | 0.0 |
HOH |
2.959 |
O |
O |
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ALA | C:258 | C:257 | 76.0 | 0.661 | T | -56.7 | 131.7 | NA | NA | NA | |||||||||||||
ALA | E:258 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3tzv | 3 | P15813 | 98.91 | 0.0 |
X-RAY |
2012-04-25 | ALA | C:256 | C:258 | 83.0 | 0.722 | -98.4 | -47.5 | 83.0 | 0.722 | 0.0 | |||||||
4mng | 2 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | ALA | B:258 | A:257 | 74.0 | 0.643 | T | -61.3 | 134.1 | 74.0 | 0.643 | 0.0 | ||||||
ALA | D:258 | C:257 | 72.0 | 0.626 | T | -61.6 | 134.1 | NA | NA | NA | |||||||||||||
4mq7 | 1 | P15813,Q7TMK5 | 92.06 | 0.0 |
X-RAY |
2013-12-18 | ALA | A:258 | A:257 | 80.0 | 0.696 | T | -72.2 | 137.8 | 80.0 | 0.696 | 0.0 |
HOH |
3.949 |
C |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p15813-f1 | 1 | P15813 | 100.0 | 0.0 | ALA | A:275 | A:275 | 76.0 | 0.661 | T | -64.0 | 138.5 |