Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr10 | 115481418 | . | G | A | CCDS7580.1:NM_033338.5:c.355Gtt>Att_NP_203124.1:p.119V>I | Homo sapiens caspase 7 (CASP7), transcript variant a, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5v6u | 1 | P55210 | 100.0 | 0.0 |
X-RAY |
2017-10-18 | VAL | A:86 | A:86 | 58.0 | NA | -59.4 | 124.6 | 58.0 | NA | NA |
HOH |
3.418 |
N |
O |
|||
VAL | B:86 | B:86 | 68.0 | 0.439 | -58.4 | 141.3 | 68.0 | 0.439 | 0.0 |
HOH |
6.078 |
N |
O |
||||||||||
5v6z | 1 | P55210 | 100.0 | 0.0 |
X-RAY |
2018-03-21 | VAL | A:86 | A:86 | 81.0 | NA | -61.2 | 126.2 | 81.0 | NA | NA |
HOH |
8.292 |
C |
O |
|||
VAL | B:86 | B:86 | 76.0 | 0.49 | -58.0 | 133.0 | 76.0 | 0.49 | 0.0 |
HOH |
5.934 |
CG1 |
O |
||||||||||
4fdl | 1 | P55210 | 100.0 | 0.0 |
X-RAY |
2012-08-01 | VAL | A:88 | A:86 | 66.0 | 0.426 | -62.4 | 128.7 | 66.0 | 0.426 | 0.0 |
HOH |
3.402 |
CG2 |
O |
|||
VAL | B:88 | B:86 | 68.0 | 0.439 | -71.3 | 126.0 | 68.0 | 0.439 | 0.0 |
HOH |
5.876 |
N |
O |
||||||||||
1kmc | 1 | P55210 | 99.67 | 0.0 |
X-RAY |
2002-01-16 | VAL | A:86 | A:178 | 65.0 | 0.419 | -73.4 | 109.1 | 65.0 | 0.419 | 0.0 |
HOH |
8.222 |
CG1 |
O |
|||
VAL | B:86 | B:178 | 64.0 | 0.413 | -74.1 | 109.6 | 64.0 | 0.413 | 0.0 |
HOH |
8.566 |
CG1 |
O |
||||||||||
1f1j | 1 | P55210 | 99.67 | 0.0 |
X-RAY |
2001-05-23 | VAL | A:88 | A:86 | 61.0 | 0.394 | -62.6 | 127.3 | 58.0 | 0.374 | 0.02 |
C:None:0.019 |
SO4 HOH |
6.795 3.015 |
CG1 O |
O4 O |
||
VAL | B:88 | B:386 | 68.0 | 0.439 | -59.2 | 132.8 | NA | NA | NA | ||||||||||||||
3r5k | 1 | P55210 | 99.01 | 0.0 |
X-RAY |
2011-06-29 | VAL | A:86 | A:86 | 75.0 | 0.484 | -87.4 | 145.8 | 75.0 | 0.484 | 0.0 |
FMT FMT HOH |
6.686 7.428 3.392 |
CG1 O CG2 |
O2 O2 O |
|||
VAL | B:86 | B:386 | 73.0 | 0.471 | -44.6 | 128.2 | 73.0 | 0.471 | 0.0 |
FMT HOH |
7.601 3.176 |
O N |
C O |
||||||||||
1i4o | 1 | P55210 | 100.0 | 0.0 |
X-RAY |
2001-03-21 | VAL | A:63 | A:86 | 66.0 | 0.426 | -66.2 | 134.2 | 65.0 | 0.419 | 0.007 |
C:P98170:0.006 |
HOH |
6.237 |
N |
O |
||
VAL | B:63 | B:86 | 61.0 | 0.394 | -77.4 | 134.4 | NA | NA | NA | ||||||||||||||
1gqf | 1 | P55210 | 99.61 | 0.0 |
X-RAY |
2002-01-04 | VAL | A:40 | A:178 | 72.0 | 0.465 | -63.0 | 137.4 | 72.0 | 0.465 | 0.0 |
SO4 HOH |
5.321 6.397 |
O CG2 |
O1 O |
|||
VAL | B:40 | B:178 | NA | NA | NA | NA | NA | NA | NA | NA |
SO4 SO4 SO4 HOH |
5.469 6.590 6.839 7.116 |
C CG2 CG2 CB |
O2 O4 O1 O |
|||||||||
1shj | 1 | P55210 | 99.61 | 0.0 |
X-RAY |
2004-08-17 | VAL | A:37 | A:86 | 76.0 | 0.49 | -67.9 | 115.2 | 76.0 | 0.49 | 0.0 | |||||||
VAL | B:37 | B:86 | 79.0 | 0.51 | -61.1 | 127.4 | 79.0 | 0.51 | 0.0 |
SO4 |
6.518 |
CG1 |
O4 |
||||||||||
4hq0 | 1 | P55210 | 97.34 | 0.0 |
X-RAY |
2013-09-11 | VAL | A:41 | A:86 | 65.0 | 0.419 | -55.2 | 150.6 | 65.0 | 0.419 | 0.0 | |||||||
VAL | B:41 | B:86 | 69.0 | 0.445 | -65.3 | 135.7 | 69.0 | 0.445 | 0.0 | ||||||||||||||
4hqr | 1 | P55210 | 97.34 | 0.0 |
X-RAY |
2013-09-11 | VAL | A:41 | A:86 | 71.0 | 0.458 | -65.9 | 145.5 | 66.0 | 0.426 | 0.032 |
C:None:0.032 |
||||||
VAL | B:41 | B:86 | 76.0 | 0.49 | -68.8 | 135.1 | 70.0 | 0.452 | 0.038 |
D:None:0.039 |
|||||||||||||
1k86 | 1 | P55210 | 99.6 | 0.0 |
X-RAY |
2001-11-21 | VAL | A:36 | A:86 | 71.0 | 0.458 | -72.5 | 128.1 | 71.0 | 0.458 | 0.0 |
HOH |
5.979 |
CG1 |
O |
|||
VAL | B:36 | B:86 | 65.0 | 0.419 | -51.5 | 137.6 | 65.0 | 0.419 | 0.0 |
HOH |
3.060 |
N |
O |
||||||||||
3h1p | 1 | P55210 | 99.21 | 0.0 |
X-RAY |
2009-06-30 | VAL | A:37 | A:86 | 70.0 | 0.452 | -73.0 | 129.6 | 63.0 | 0.406 | 0.046 |
C:None:0.045 |
HOH |
6.270 |
CG1 |
O |
||
VAL | B:37 | B:86 | 71.0 | 0.458 | -51.1 | 137.9 | 64.0 | 0.413 | 0.045 |
D:None:0.045 |
HOH |
2.640 |
CG2 |
O |
|||||||||
1k88 | 1 | P55210 | 99.21 | 0.0 |
X-RAY |
2001-11-21 | VAL | A:36 | A:86 | 71.0 | 0.458 | -47.1 | 137.8 | 71.0 | 0.458 | 0.0 |
HOH |
2.702 |
N |
O |
|||
VAL | B:36 | B:86 | 76.0 | 0.49 | -65.7 | 139.7 | 76.0 | 0.49 | 0.0 |
HOH |
3.307 |
CG2 |
O |
||||||||||
4fea | 1 | P55210 | 100.0 | 0.0 |
X-RAY |
2012-08-01 | VAL | A:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
VAL | B:30 | B:86 | 79.0 | 0.51 | -80.5 | 106.9 | 79.0 | 0.51 | 0.0 | ||||||||||||||
4jj8 | 1 | P55210 | 100.0 | 0.0 |
X-RAY |
2013-06-12 | VAL | A:30 | A:86 | 59.0 | 0.381 | -66.8 | 134.2 | 59.0 | 0.381 | 0.0 |
HOH |
7.016 |
CG2 |
O |
|||
VAL | B:30 | B:86 | 68.0 | 0.439 | -67.8 | 132.4 | NA | NA | NA | ||||||||||||||
4jr1 | 1 | P55210 | 99.6 | 0.0 |
X-RAY |
2013-05-08 | VAL | A:33 | A:86 | 74.0 | 0.477 | -66.9 | 137.5 | 67.0 | 0.432 | 0.045 |
C:None:0.045 |
CL HOH |
7.058 2.946 |
CG1 N |
CL O |
||
VAL | B:33 | B:86 | 69.0 | 0.445 | -68.9 | 132.6 | 62.0 | 0.4 | 0.045 |
D:None:0.045 |
CL HOH |
6.309 3.080 |
CG1 N |
CL O |
|||||||||
4jr2 | 1 | P55210 | 99.6 | 0.0 |
X-RAY |
2013-05-08 | VAL | A:33 | A:86 | 64.0 | 0.413 | -62.5 | 135.0 | 57.0 | 0.368 | 0.045 |
C:None:0.045 |
CL HOH |
6.271 2.952 |
CG2 N |
CL O |
||
VAL | B:33 | B:86 | 70.0 | 0.452 | -63.0 | 140.4 | 65.0 | 0.419 | 0.033 |
D:None:0.032 |
HOH |
2.810 |
O |
O |
|||||||||
1shl | 1 | P55210 | 95.55 | 1e-177 |
X-RAY |
2004-08-17 | VAL | A:30 | A:86 | 77.0 | 0.497 | -53.4 | 128.3 | 77.0 | 0.497 | 0.0 | |||||||
VAL | B:30 | B:86 | 76.0 | 0.49 | -61.2 | 137.5 | 76.0 | 0.49 | 0.0 | ||||||||||||||
4zvo | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 72.0 | 0.465 | -57.4 | 133.9 | 56.0 | 0.361 | 0.104 |
B:P55210:0.039 E:None:0.097 |
||||||
VAL | C:86 | C:386 | 74.0 | 0.477 | -58.5 | 132.8 | 61.0 | 0.394 | 0.083 |
F:None:0.077 D:P55210:0.039 |
|||||||||||||
4zvp | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 78.0 | 0.503 | -66.2 | 138.9 | 66.0 | 0.426 | 0.077 |
B:P55210:0.039 E:None:0.071 |
HOH |
6.595 |
CG1 |
O |
||
VAL | C:86 | C:386 | 69.0 | 0.445 | -67.6 | 141.3 | 58.0 | 0.374 | 0.071 |
F:None:0.065 D:P55210:0.032 |
HOH |
3.117 |
N |
O |
|||||||||
4zvq | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 77.0 | 0.497 | -67.7 | 135.6 | 63.0 | 0.406 | 0.091 |
B:P55210:0.032 E:None:0.09 |
HOH |
6.615 |
CG1 |
O |
||
VAL | C:86 | C:386 | 77.0 | 0.497 | -68.0 | 136.0 | 66.0 | 0.426 | 0.071 |
F:None:0.058 D:P55210:0.039 |
HOH |
5.558 |
CG1 |
O |
|||||||||
4zvr | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 80.0 | 0.516 | -68.7 | 138.2 | 66.0 | 0.426 | 0.09 |
B:P55210:0.045 E:None:0.077 |
HOH |
6.578 |
CG1 |
O |
||
VAL | C:86 | C:386 | 80.0 | 0.516 | -65.9 | 141.8 | 67.0 | 0.432 | 0.084 |
F:None:0.071 D:P55210:0.045 |
HOH |
4.813 |
O |
O |
|||||||||
4zvs | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 78.0 | 0.503 | -66.8 | 142.7 | 61.0 | 0.394 | 0.109 |
B:P55210:0.045 E:None:0.11 |
HOH |
4.010 |
CG1 |
O |
||
VAL | C:86 | C:386 | 80.0 | 0.516 | -66.2 | 142.7 | 68.0 | 0.439 | 0.077 |
F:None:0.071 D:P55210:0.045 |
HOH |
2.699 |
O |
O |
|||||||||
4zvt | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 65.0 | 0.419 | -59.3 | 131.9 | 52.0 | 0.335 | 0.084 |
B:P55210:0.032 E:None:0.077 |
HOH |
6.573 |
CG1 |
O |
||
VAL | C:86 | C:386 | 75.0 | 0.484 | -59.2 | 131.4 | 63.0 | 0.406 | 0.078 |
D:P55210:0.032 F:None:0.065 |
HOH |
6.680 |
CG1 |
O |
|||||||||
4zvu | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-04-20 | VAL | A:86 | A:86 | 73.0 | 0.471 | -58.2 | 131.9 | 60.0 | 0.387 | 0.084 |
B:P55210:0.032 F:None:0.077 |
HOH |
6.568 |
CG1 |
O |
||
VAL | C:86 | C:386 | 76.0 | 0.49 | -59.0 | 132.2 | 63.0 | 0.406 | 0.084 |
D:P55210:0.026 E:None:0.077 |
HOH |
7.052 |
CG1 |
O |
|||||||||
5ic6 | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2016-07-20 | VAL | A:86 | A:86 | 77.0 | 0.497 | -65.2 | 134.1 | 63.0 | 0.406 | 0.091 |
B:P55210:0.045 E:None:0.084 |
||||||
VAL | C:86 | C:86 | 76.0 | 0.49 | -65.5 | 134.7 | NA | NA | NA | ||||||||||||||
5k20 | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2017-01-11 | VAL | A:86 | A:86 | 67.0 | 0.432 | -63.6 | 143.8 | 67.0 | 0.432 | 0.0 |
FMT |
6.707 |
CG2 |
O1 |
|||
VAL | C:86 | C:386 | 74.0 | 0.477 | -59.7 | 141.6 | 74.0 | 0.477 | 0.0 |
FMT HOH |
6.580 3.166 |
CG1 N |
O2 O |
||||||||||
6cl1 | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2019-03-06 | VAL | A:86 | A:86 | 71.0 | 0.458 | -68.6 | 132.1 | 65.0 | 0.419 | 0.039 |
B:P55210:0.039 |
||||||
VAL | C:86 | C:86 | 76.0 | 0.49 | -68.8 | 131.2 | 71.0 | 0.458 | 0.032 |
D:P55210:0.032 |
HOH |
3.120 |
N |
O |
|||||||||
6cl2 | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2019-03-06 | VAL | A:86 | A:86 | 76.0 | 0.49 | -68.7 | 137.5 | 72.0 | 0.465 | 0.025 |
B:P55210:0.026 |
HOH |
2.758 |
O |
O |
||
VAL | C:86 | C:86 | 76.0 | 0.49 | -59.2 | 132.9 | 71.0 | 0.458 | 0.032 |
D:P55210:0.032 |
HOH |
3.249 |
O |
O |
|||||||||
6x8j | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2021-06-02 | VAL | A:86 | A:86 | 69.0 | 0.445 | -73.0 | 138.6 | 57.0 | 0.368 | 0.077 |
B:P55210:0.039 E:None:0.077 |
HOH |
3.124 |
N |
O |
||
VAL | C:86 | B:86 | 73.0 | 0.471 | -73.4 | 137.9 | 59.0 | 0.381 | 0.09 |
F:None:0.09 D:P55210:0.039 |
|||||||||||||
6x8l | 1 | P55210 | 100.0 | 1e-146 |
X-RAY |
2021-06-02 | VAL | A:86 | A:86 | 69.0 | 0.445 | -67.8 | 137.6 | 58.0 | 0.374 | 0.071 |
B:P55210:0.039 E:None:0.065 |
HOH |
5.401 |
CG2 |
O |
||
VAL | C:86 | B:86 | 79.0 | 0.51 | -70.9 | 135.0 | 66.0 | 0.426 | 0.084 |
F:None:0.077 D:P55210:0.039 |
HOH |
8.082 |
CG1 |
O |
|||||||||
4jb8 | 1 | P55210 | 100.0 | 1e-128 |
X-RAY |
2013-08-21 | VAL | A:63 | A:86 | 74.0 | 0.477 | -62.3 | 142.5 | 67.0 | 0.432 | 0.045 |
B:P55210:0.045 |
HOH |
3.984 |
CG1 |
O |
||
4lsz | 1 | P55210 | 100.0 | 1e-128 |
X-RAY |
2014-07-02 | VAL | A:63 | A:86 | 76.0 | 0.49 | -69.3 | 140.7 | 70.0 | 0.452 | 0.038 |
B:P55210:0.039 |
HOH |
4.387 |
CG1 |
O |
||
VAL | C:63 | C:86 | 82.0 | 0.529 | -69.9 | 139.0 | 76.0 | 0.49 | 0.039 |
D:P55210:0.039 |
HOH |
3.479 |
N |
O |
|||||||||
2ql5 | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2007-08-28 | VAL | A:63 | A:86 | 73.0 | 0.471 | -64.6 | 125.6 | 69.0 | 0.445 | 0.026 |
B:P55210:0.026 |
HOH |
6.835 |
CG1 |
O |
||
VAL | C:63 | C:386 | 78.0 | 0.503 | -66.2 | 133.2 | 69.0 | 0.445 | 0.058 |
F:None:0.052 D:P55210:0.026 |
HOH |
3.307 |
N |
O |
|||||||||
2ql7 | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2007-08-28 | VAL | A:63 | A:86 | 78.0 | 0.503 | -71.1 | 133.3 | 64.0 | 0.413 | 0.09 |
B:P55210:0.045 E:None:0.084 |
HOH |
3.747 |
N |
O |
||
VAL | C:63 | C:386 | 77.0 | 0.497 | -62.0 | 134.2 | 67.0 | 0.432 | 0.065 |
F:None:0.058 D:P55210:0.032 |
HOH |
2.881 |
CG2 |
O |
|||||||||
2ql9 | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2007-08-28 | VAL | A:63 | A:86 | 77.0 | 0.497 | -64.9 | 130.1 | 64.0 | 0.413 | 0.084 |
B:P55210:0.039 E:None:0.071 |
HOH |
3.462 |
N |
O |
||
VAL | C:63 | C:386 | 76.0 | 0.49 | -65.7 | 141.1 | 62.0 | 0.4 | 0.09 |
F:None:0.077 D:P55210:0.039 |
HOH |
2.862 |
O |
O |
|||||||||
2qlb | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2007-08-28 | VAL | A:63 | A:86 | 76.0 | 0.49 | -67.4 | 135.0 | 71.0 | 0.458 | 0.032 |
B:P55210:0.026 E:None:0.013 |
HOH |
3.301 |
O |
O |
||
VAL | C:63 | C:386 | 76.0 | 0.49 | -58.7 | 137.9 | 70.0 | 0.452 | 0.038 |
D:P55210:0.039 |
HOH |
2.814 |
N |
O |
|||||||||
2qlf | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2007-08-28 | VAL | A:63 | A:86 | 61.0 | 0.394 | -66.8 | 122.8 | 54.0 | 0.348 | 0.046 |
B:P55210:0.026 E:None:0.032 |
HOH |
6.226 |
CG1 |
O |
||
VAL | C:63 | C:386 | 74.0 | 0.477 | -70.0 | 127.7 | 66.0 | 0.426 | 0.051 |
F:None:0.039 D:P55210:0.032 |
HOH |
6.872 |
CG1 |
O |
|||||||||
2qlj | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2007-08-28 | VAL | A:63 | A:86 | 74.0 | 0.477 | -61.4 | 136.1 | 60.0 | 0.387 | 0.09 |
B:P55210:0.039 E:None:0.084 |
HOH |
7.092 |
CG1 |
O |
||
VAL | C:63 | C:386 | 80.0 | 0.516 | -58.9 | 141.6 | 69.0 | 0.445 | 0.071 |
F:None:0.065 D:P55210:0.026 |
HOH |
3.100 |
N |
O |
|||||||||
3edr | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2008-10-28 | VAL | A:63 | A:86 | 71.0 | 0.458 | -68.8 | 127.5 | 62.0 | 0.4 | 0.058 |
B:P55210:0.026 E:None:0.045 |
HOH |
7.037 |
CG1 |
O |
||
VAL | C:63 | C:386 | 72.0 | 0.465 | -62.5 | 139.2 | 63.0 | 0.406 | 0.059 |
F:None:0.045 D:P55210:0.026 |
HOH |
3.327 |
N |
O |
|||||||||
3ibc | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2009-09-01 | VAL | A:63 | A:86 | 74.0 | 0.477 | -84.8 | 127.8 | 70.0 | 0.452 | 0.025 |
B:P55210:0.026 |
HOH |
7.326 |
CG1 |
O |
||
VAL | C:63 | C:386 | 70.0 | 0.452 | -54.1 | 122.2 | 68.0 | 0.439 | 0.013 |
D:P55210:0.013 |
HOH |
6.793 |
CG1 |
O |
|||||||||
3ibf | 1 | P55210 | 100.0 | 4e-127 |
X-RAY |
2009-09-01 | VAL | A:63 | A:86 | 68.0 | 0.439 | -65.8 | 140.5 | 66.0 | 0.426 | 0.013 |
B:P55210:0.013 |
HOH |
7.825 |
CG1 |
O |
||
VAL | C:63 | C:386 | 74.0 | 0.477 | -58.9 | 142.3 | 71.0 | 0.458 | 0.019 |
D:P55210:0.019 |
HOH |
6.226 |
CG1 |
O |
|||||||||
1i51 | 1 | P55210 | 99.32 | 6e-107 |
X-RAY |
2002-02-23 | VAL | A:36 | A:86 | 77.0 | 0.497 | -82.5 | 123.7 | 70.0 | 0.452 | 0.045 |
B:P55210:0.045 E:P98170:0.019 |
||||||
VAL | C:36 | C:86 | 77.0 | 0.497 | -78.3 | 135.7 | 68.0 | 0.439 | 0.058 |
D:P55210:0.045 F:P98170:0.032 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p55210-f1 | 1 | P55210 | 100.0 | 0.0 | VAL | A:86 | A:86 | 76.0 | 0.49 | -68.9 | 132.3 |