Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr10 115481418 . G A CCDS7580.1:NM_033338.5:c.355Gtt>Att_NP_203124.1:p.119V>I Homo sapiens caspase 7 (CASP7), transcript variant a, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5v6u 1 P55210 100.0 0.0 X-RAY
2017-10-18 VAL A:86 A:86 58.0 NA -59.4 124.6 58.0 NA NA HOH
3.418
N
O
VAL B:86 B:86 68.0 0.439 -58.4 141.3 68.0 0.439 0.0 HOH
6.078
N
O
5v6z 1 P55210 100.0 0.0 X-RAY
2018-03-21 VAL A:86 A:86 81.0 NA -61.2 126.2 81.0 NA NA HOH
8.292
C
O
VAL B:86 B:86 76.0 0.49 -58.0 133.0 76.0 0.49 0.0 HOH
5.934
CG1
O
4fdl 1 P55210 100.0 0.0 X-RAY
2012-08-01 VAL A:88 A:86 66.0 0.426 -62.4 128.7 66.0 0.426 0.0 HOH
3.402
CG2
O
VAL B:88 B:86 68.0 0.439 -71.3 126.0 68.0 0.439 0.0 HOH
5.876
N
O
1kmc 1 P55210 99.67 0.0 X-RAY
2002-01-16 VAL A:86 A:178 65.0 0.419 -73.4 109.1 65.0 0.419 0.0 HOH
8.222
CG1
O
VAL B:86 B:178 64.0 0.413 -74.1 109.6 64.0 0.413 0.0 HOH
8.566
CG1
O
1f1j 1 P55210 99.67 0.0 X-RAY
2001-05-23 VAL A:88 A:86 61.0 0.394 -62.6 127.3 58.0 0.374 0.02 C:None:0.019
SO4
HOH
6.795
3.015
CG1
O
O4
O
VAL B:88 B:386 68.0 0.439 -59.2 132.8 NA NA NA
3r5k 1 P55210 99.01 0.0 X-RAY
2011-06-29 VAL A:86 A:86 75.0 0.484 -87.4 145.8 75.0 0.484 0.0 FMT
FMT
HOH
6.686
7.428
3.392
CG1
O
CG2
O2
O2
O
VAL B:86 B:386 73.0 0.471 -44.6 128.2 73.0 0.471 0.0 FMT
HOH
7.601
3.176
O
N
C
O
1i4o 1 P55210 100.0 0.0 X-RAY
2001-03-21 VAL A:63 A:86 66.0 0.426 -66.2 134.2 65.0 0.419 0.007 C:P98170:0.006
HOH
6.237
N
O
VAL B:63 B:86 61.0 0.394 -77.4 134.4 NA NA NA
1gqf 1 P55210 99.61 0.0 X-RAY
2002-01-04 VAL A:40 A:178 72.0 0.465 -63.0 137.4 72.0 0.465 0.0 SO4
HOH
5.321
6.397
O
CG2
O1
O
VAL B:40 B:178 NA NA NA NA NA NA NA NA SO4
SO4
SO4
HOH
5.469
6.590
6.839
7.116
C
CG2
CG2
CB
O2
O4
O1
O
1shj 1 P55210 99.61 0.0 X-RAY
2004-08-17 VAL A:37 A:86 76.0 0.49 -67.9 115.2 76.0 0.49 0.0
VAL B:37 B:86 79.0 0.51 -61.1 127.4 79.0 0.51 0.0 SO4
6.518
CG1
O4
4hq0 1 P55210 97.34 0.0 X-RAY
2013-09-11 VAL A:41 A:86 65.0 0.419 -55.2 150.6 65.0 0.419 0.0
VAL B:41 B:86 69.0 0.445 -65.3 135.7 69.0 0.445 0.0
4hqr 1 P55210 97.34 0.0 X-RAY
2013-09-11 VAL A:41 A:86 71.0 0.458 -65.9 145.5 66.0 0.426 0.032 C:None:0.032
VAL B:41 B:86 76.0 0.49 -68.8 135.1 70.0 0.452 0.038 D:None:0.039
1k86 1 P55210 99.6 0.0 X-RAY
2001-11-21 VAL A:36 A:86 71.0 0.458 -72.5 128.1 71.0 0.458 0.0 HOH
5.979
CG1
O
VAL B:36 B:86 65.0 0.419 -51.5 137.6 65.0 0.419 0.0 HOH
3.060
N
O
3h1p 1 P55210 99.21 0.0 X-RAY
2009-06-30 VAL A:37 A:86 70.0 0.452 -73.0 129.6 63.0 0.406 0.046 C:None:0.045
HOH
6.270
CG1
O
VAL B:37 B:86 71.0 0.458 -51.1 137.9 64.0 0.413 0.045 D:None:0.045
HOH
2.640
CG2
O
1k88 1 P55210 99.21 0.0 X-RAY
2001-11-21 VAL A:36 A:86 71.0 0.458 -47.1 137.8 71.0 0.458 0.0 HOH
2.702
N
O
VAL B:36 B:86 76.0 0.49 -65.7 139.7 76.0 0.49 0.0 HOH
3.307
CG2
O
4fea 1 P55210 100.0 0.0 X-RAY
2012-08-01 VAL A:30 NA:NA DO NA DO DO DO NA NA NA
VAL B:30 B:86 79.0 0.51 -80.5 106.9 79.0 0.51 0.0
4jj8 1 P55210 100.0 0.0 X-RAY
2013-06-12 VAL A:30 A:86 59.0 0.381 -66.8 134.2 59.0 0.381 0.0 HOH
7.016
CG2
O
VAL B:30 B:86 68.0 0.439 -67.8 132.4 NA NA NA
4jr1 1 P55210 99.6 0.0 X-RAY
2013-05-08 VAL A:33 A:86 74.0 0.477 -66.9 137.5 67.0 0.432 0.045 C:None:0.045
CL
HOH
7.058
2.946
CG1
N
CL
O
VAL B:33 B:86 69.0 0.445 -68.9 132.6 62.0 0.4 0.045 D:None:0.045
CL
HOH
6.309
3.080
CG1
N
CL
O
4jr2 1 P55210 99.6 0.0 X-RAY
2013-05-08 VAL A:33 A:86 64.0 0.413 -62.5 135.0 57.0 0.368 0.045 C:None:0.045
CL
HOH
6.271
2.952
CG2
N
CL
O
VAL B:33 B:86 70.0 0.452 -63.0 140.4 65.0 0.419 0.033 D:None:0.032
HOH
2.810
O
O
1shl 1 P55210 95.55 1e-177 X-RAY
2004-08-17 VAL A:30 A:86 77.0 0.497 -53.4 128.3 77.0 0.497 0.0
VAL B:30 B:86 76.0 0.49 -61.2 137.5 76.0 0.49 0.0
4zvo 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 72.0 0.465 -57.4 133.9 56.0 0.361 0.104 B:P55210:0.039
E:None:0.097
VAL C:86 C:386 74.0 0.477 -58.5 132.8 61.0 0.394 0.083 F:None:0.077
D:P55210:0.039
4zvp 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 78.0 0.503 -66.2 138.9 66.0 0.426 0.077 B:P55210:0.039
E:None:0.071
HOH
6.595
CG1
O
VAL C:86 C:386 69.0 0.445 -67.6 141.3 58.0 0.374 0.071 F:None:0.065
D:P55210:0.032
HOH
3.117
N
O
4zvq 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 77.0 0.497 -67.7 135.6 63.0 0.406 0.091 B:P55210:0.032
E:None:0.09
HOH
6.615
CG1
O
VAL C:86 C:386 77.0 0.497 -68.0 136.0 66.0 0.426 0.071 F:None:0.058
D:P55210:0.039
HOH
5.558
CG1
O
4zvr 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 80.0 0.516 -68.7 138.2 66.0 0.426 0.09 B:P55210:0.045
E:None:0.077
HOH
6.578
CG1
O
VAL C:86 C:386 80.0 0.516 -65.9 141.8 67.0 0.432 0.084 F:None:0.071
D:P55210:0.045
HOH
4.813
O
O
4zvs 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 78.0 0.503 -66.8 142.7 61.0 0.394 0.109 B:P55210:0.045
E:None:0.11
HOH
4.010
CG1
O
VAL C:86 C:386 80.0 0.516 -66.2 142.7 68.0 0.439 0.077 F:None:0.071
D:P55210:0.045
HOH
2.699
O
O
4zvt 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 65.0 0.419 -59.3 131.9 52.0 0.335 0.084 B:P55210:0.032
E:None:0.077
HOH
6.573
CG1
O
VAL C:86 C:386 75.0 0.484 -59.2 131.4 63.0 0.406 0.078 D:P55210:0.032
F:None:0.065
HOH
6.680
CG1
O
4zvu 1 P55210 100.0 1e-146 X-RAY
2016-04-20 VAL A:86 A:86 73.0 0.471 -58.2 131.9 60.0 0.387 0.084 B:P55210:0.032
F:None:0.077
HOH
6.568
CG1
O
VAL C:86 C:386 76.0 0.49 -59.0 132.2 63.0 0.406 0.084 D:P55210:0.026
E:None:0.077
HOH
7.052
CG1
O
5ic6 1 P55210 100.0 1e-146 X-RAY
2016-07-20 VAL A:86 A:86 77.0 0.497 -65.2 134.1 63.0 0.406 0.091 B:P55210:0.045
E:None:0.084
VAL C:86 C:86 76.0 0.49 -65.5 134.7 NA NA NA
5k20 1 P55210 100.0 1e-146 X-RAY
2017-01-11 VAL A:86 A:86 67.0 0.432 -63.6 143.8 67.0 0.432 0.0 FMT
6.707
CG2
O1
VAL C:86 C:386 74.0 0.477 -59.7 141.6 74.0 0.477 0.0 FMT
HOH
6.580
3.166
CG1
N
O2
O
6cl1 1 P55210 100.0 1e-146 X-RAY
2019-03-06 VAL A:86 A:86 71.0 0.458 -68.6 132.1 65.0 0.419 0.039 B:P55210:0.039
VAL C:86 C:86 76.0 0.49 -68.8 131.2 71.0 0.458 0.032 D:P55210:0.032
HOH
3.120
N
O
6cl2 1 P55210 100.0 1e-146 X-RAY
2019-03-06 VAL A:86 A:86 76.0 0.49 -68.7 137.5 72.0 0.465 0.025 B:P55210:0.026
HOH
2.758
O
O
VAL C:86 C:86 76.0 0.49 -59.2 132.9 71.0 0.458 0.032 D:P55210:0.032
HOH
3.249
O
O
6x8j 1 P55210 100.0 1e-146 X-RAY
2021-06-02 VAL A:86 A:86 69.0 0.445 -73.0 138.6 57.0 0.368 0.077 B:P55210:0.039
E:None:0.077
HOH
3.124
N
O
VAL C:86 B:86 73.0 0.471 -73.4 137.9 59.0 0.381 0.09 F:None:0.09
D:P55210:0.039
6x8l 1 P55210 100.0 1e-146 X-RAY
2021-06-02 VAL A:86 A:86 69.0 0.445 -67.8 137.6 58.0 0.374 0.071 B:P55210:0.039
E:None:0.065
HOH
5.401
CG2
O
VAL C:86 B:86 79.0 0.51 -70.9 135.0 66.0 0.426 0.084 F:None:0.077
D:P55210:0.039
HOH
8.082
CG1
O
4jb8 1 P55210 100.0 1e-128 X-RAY
2013-08-21 VAL A:63 A:86 74.0 0.477 -62.3 142.5 67.0 0.432 0.045 B:P55210:0.045
HOH
3.984
CG1
O
4lsz 1 P55210 100.0 1e-128 X-RAY
2014-07-02 VAL A:63 A:86 76.0 0.49 -69.3 140.7 70.0 0.452 0.038 B:P55210:0.039
HOH
4.387
CG1
O
VAL C:63 C:86 82.0 0.529 -69.9 139.0 76.0 0.49 0.039 D:P55210:0.039
HOH
3.479
N
O
2ql5 1 P55210 100.0 4e-127 X-RAY
2007-08-28 VAL A:63 A:86 73.0 0.471 -64.6 125.6 69.0 0.445 0.026 B:P55210:0.026
HOH
6.835
CG1
O
VAL C:63 C:386 78.0 0.503 -66.2 133.2 69.0 0.445 0.058 F:None:0.052
D:P55210:0.026
HOH
3.307
N
O
2ql7 1 P55210 100.0 4e-127 X-RAY
2007-08-28 VAL A:63 A:86 78.0 0.503 -71.1 133.3 64.0 0.413 0.09 B:P55210:0.045
E:None:0.084
HOH
3.747
N
O
VAL C:63 C:386 77.0 0.497 -62.0 134.2 67.0 0.432 0.065 F:None:0.058
D:P55210:0.032
HOH
2.881
CG2
O
2ql9 1 P55210 100.0 4e-127 X-RAY
2007-08-28 VAL A:63 A:86 77.0 0.497 -64.9 130.1 64.0 0.413 0.084 B:P55210:0.039
E:None:0.071
HOH
3.462
N
O
VAL C:63 C:386 76.0 0.49 -65.7 141.1 62.0 0.4 0.09 F:None:0.077
D:P55210:0.039
HOH
2.862
O
O
2qlb 1 P55210 100.0 4e-127 X-RAY
2007-08-28 VAL A:63 A:86 76.0 0.49 -67.4 135.0 71.0 0.458 0.032 B:P55210:0.026
E:None:0.013
HOH
3.301
O
O
VAL C:63 C:386 76.0 0.49 -58.7 137.9 70.0 0.452 0.038 D:P55210:0.039
HOH
2.814
N
O
2qlf 1 P55210 100.0 4e-127 X-RAY
2007-08-28 VAL A:63 A:86 61.0 0.394 -66.8 122.8 54.0 0.348 0.046 B:P55210:0.026
E:None:0.032
HOH
6.226
CG1
O
VAL C:63 C:386 74.0 0.477 -70.0 127.7 66.0 0.426 0.051 F:None:0.039
D:P55210:0.032
HOH
6.872
CG1
O
2qlj 1 P55210 100.0 4e-127 X-RAY
2007-08-28 VAL A:63 A:86 74.0 0.477 -61.4 136.1 60.0 0.387 0.09 B:P55210:0.039
E:None:0.084
HOH
7.092
CG1
O
VAL C:63 C:386 80.0 0.516 -58.9 141.6 69.0 0.445 0.071 F:None:0.065
D:P55210:0.026
HOH
3.100
N
O
3edr 1 P55210 100.0 4e-127 X-RAY
2008-10-28 VAL A:63 A:86 71.0 0.458 -68.8 127.5 62.0 0.4 0.058 B:P55210:0.026
E:None:0.045
HOH
7.037
CG1
O
VAL C:63 C:386 72.0 0.465 -62.5 139.2 63.0 0.406 0.059 F:None:0.045
D:P55210:0.026
HOH
3.327
N
O
3ibc 1 P55210 100.0 4e-127 X-RAY
2009-09-01 VAL A:63 A:86 74.0 0.477 -84.8 127.8 70.0 0.452 0.025 B:P55210:0.026
HOH
7.326
CG1
O
VAL C:63 C:386 70.0 0.452 -54.1 122.2 68.0 0.439 0.013 D:P55210:0.013
HOH
6.793
CG1
O
3ibf 1 P55210 100.0 4e-127 X-RAY
2009-09-01 VAL A:63 A:86 68.0 0.439 -65.8 140.5 66.0 0.426 0.013 B:P55210:0.013
HOH
7.825
CG1
O
VAL C:63 C:386 74.0 0.477 -58.9 142.3 71.0 0.458 0.019 D:P55210:0.019
HOH
6.226
CG1
O
1i51 1 P55210 99.32 6e-107 X-RAY
2002-02-23 VAL A:36 A:86 77.0 0.497 -82.5 123.7 70.0 0.452 0.045 B:P55210:0.045
E:P98170:0.019
VAL C:36 C:86 77.0 0.497 -78.3 135.7 68.0 0.439 0.058 D:P55210:0.045
F:P98170:0.032

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55210-f1 1 P55210 100.0 0.0 VAL A:86 A:86 76.0 0.49 -68.9 132.3