Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 2416708 | . | C | A | CCDS7734.1:NM_004356.3:c.417gaC>gaA_NP_004347.1:p.139D>E | Homo sapiens CD81 molecule (CD81), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 7jic | 2 | P60033 | 99.15 | 6e-172 |
EM |
2021-01-20 | ASP | B:150 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5tcx | 1 | P60033 | 98.3 | 7e-170 |
X-RAY |
2016-11-09 | ASP | A:139 | A:139 | 110.0 | 0.733 | T | -92.9 | 27.3 | 110.0 | 0.733 | 0.0 |
HOH |
8.102 |
N |
O |
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| 6ejg | 1 | P60033 | 98.91 | 1e-61 |
X-RAY |
2018-05-30 | ASP | A:30 | A:139 | 116.0 | 0.773 | T | -119.0 | 50.8 | 116.0 | 0.773 | 0.0 |
HOH |
4.694 |
O |
O |
||
| ASP | B:30 | B:139 | 134.0 | 0.893 | S | -70.6 | -58.6 | 134.0 | 0.893 | 0.0 |
HOH |
9.555 |
OD1 |
O |
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| 6ejm | 1 | P60033 | 98.91 | 1e-61 |
X-RAY |
2018-05-30 | ASP | A:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ASP | B:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5dfv | 1 | P60033 | 97.83 | 7e-61 |
X-RAY |
2015-12-16 | ASP | A:30 | A:139 | 107.0 | 0.713 | 28.8 | 80.7 | 104.0 | 0.693 | 0.02 |
C:None:0.02 |
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| ASP | B:30 | B:139 | 133.0 | 0.887 | S | -79.1 | -11.1 | 133.0 | 0.887 | 0.0 | |||||||||||||
| 5dfw | 1 | P60033 | 97.83 | 9e-61 |
X-RAY |
2015-12-16 | ASP | A:30 | A:139 | 91.0 | 0.607 | -66.5 | 127.3 | 60.0 | 0.4 | 0.207 |
B:None:0.207 |
HOH |
3.439 |
O |
O |
||
| 6ek2 | 1 | P60033 | 97.83 | 9e-61 |
X-RAY |
2018-05-30 | ASP | A:30 | A:139 | 133.0 | 0.887 | S | -90.9 | 58.9 | 133.0 | 0.887 | 0.0 |
HOH |
2.816 |
OD2 |
O |
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| ASP | B:30 | B:139 | 138.0 | 0.92 | S | -67.5 | -4.6 | 138.0 | 0.92 | 0.0 |
HOH |
4.527 |
OD1 |
O |
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| 5m2c | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASP | A:30 | A:139 | 123.0 | 0.82 | T | -104.7 | -21.1 | 123.0 | 0.82 | 0.0 |
HOH |
7.626 |
N |
O |
||
| ASP | B:30 | B:139 | 127.0 | 0.847 | T | -111.6 | -6.1 | 127.0 | 0.847 | 0.0 |
HOH |
7.610 |
N |
O |
|||||||||
| 5m33 | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASP | A:30 | A:139 | 133.0 | 0.887 | T | -97.3 | 8.8 | 133.0 | 0.887 | 0.0 |
HOH |
2.508 |
OD2 |
O |
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| ASP | B:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5m3d | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASP | A:30 | A:139 | 130.0 | 0.867 | T | -100.7 | -2.6 | 130.0 | 0.867 | 0.0 |
EDO HOH |
9.919 4.232 |
O O |
HO1 O |
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| ASP | B:30 | B:139 | 124.0 | 0.827 | T | -84.8 | -13.6 | NA | NA | NA | |||||||||||||
| ASP | C:30 | C:139 | 71.0 | 0.473 | -124.8 | 19.1 | NA | NA | NA | ||||||||||||||
| ASP | D:30 | D:139 | 73.0 | 0.487 | -143.5 | 27.0 | 73.0 | 0.487 | 0.0 |
PO4 EDO |
3.014 6.020 |
HB3 HA |
O1 H11 |
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| 5m3t | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASP | A:30 | A:139 | 150.0 | 1.0 | S | 55.4 | 25.6 | 150.0 | 1.0 | 0.0 |
EDO |
8.299 |
O |
O2 |
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| ASP | B:30 | B:139 | 121.0 | 0.807 | T | 65.4 | 3.3 | 121.0 | 0.807 | 0.0 |
EDO HOH |
9.741 8.897 |
O N |
HO2 O |
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| 5m4r | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASP | A:30 | A:139 | 140.0 | 0.933 | -63.7 | 169.7 | 140.0 | 0.933 | 0.0 | |||||||
| ASP | B:30 | B:139 | 114.0 | 0.76 | S | -55.7 | 142.8 | NA | NA | NA | |||||||||||||
| ASP | C:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| ASP | D:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| ASP | E:30 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 3x0e | 1 | P60033 | 100.0 | 3e-60 |
X-RAY |
2015-07-01 | ASP | A:30 | A:139 | 135.0 | 0.9 | T | -88.1 | 9.0 | 135.0 | 0.9 | 0.0 |
MG MG HOH |
4.774 9.424 2.487 |
O O O |
MG MG O |
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| ASP | B:30 | B:139 | 163.0 | 1.0 | S | 59.0 | 32.8 | 163.0 | 1.0 | 0.0 |
MG HOH |
7.513 5.752 |
O O |
MG O |
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| 6u9s | 3 | P60033 | 96.74 | 4e-60 |
X-RAY |
2020-05-13 | ASP | C:30 | C:139 | 133.0 | 0.887 | S | -85.1 | -21.4 | 133.0 | 0.887 | 0.0 |
HOH |
2.512 |
OD2 |
O |
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| ASP | F:30 | F:139 | 94.0 | 0.627 | S | -77.3 | 152.7 | NA | NA | NA | |||||||||||||
| 1g8q | 1 | P60033 | 100.0 | 2e-59 |
X-RAY |
2001-02-21 | ASP | A:27 | A:139 | 123.0 | 0.82 | T | -109.9 | 27.7 | 123.0 | 0.82 | 0.0 |
HOH |
3.163 |
OD1 |
O |
||
| ASP | B:27 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 1iv5 | 1 | P60033 | 100.0 | 2e-59 |
X-RAY |
2003-01-28 | ASP | A:27 | A:139 | 135.0 | 0.9 | 80.8 | -21.4 | 135.0 | 0.9 | 0.0 |
HOH |
3.017 |
O |
O |
|||
| ASP | B:27 | B:239 | 127.0 | 0.847 | T | 53.2 | 65.0 | 127.0 | 0.847 | 0.0 |
HOH |
6.186 |
C |
O |
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| 7mws | 1 | Q9N0J9 | 92.55 | 4e-59 |
X-RAY |
2021-09-15 | ASP | A:34 | A:139 | 138.0 | 0.92 | S | -118.8 | 11.2 | 138.0 | 0.92 | 0.0 |
PG4 HOH |
4.686 3.510 |
OD1 OD1 |
C2 O |
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| ASP | B:34 | B:139 | 125.0 | 0.833 | S | -125.5 | 55.4 | NA | NA | NA | |||||||||||||
| 7mwx | 4 | Q9N0J9 | 93.41 | 3e-57 |
X-RAY |
2021-09-15 | ASP | E:30 | D:36 | 31.0 | 0.207 | S | -129.9 | 172.5 | 31.0 | 0.207 | 0.0 | ||||||
| ASP | H:30 | H:36 | 85.0 | NA | T | 76.4 | -4.8 | NA | NA | NA | |||||||||||||
| 3x0g | 1 | ? | 94.44 | 1e-56 |
X-RAY |
2015-07-01 | ASP | A:30 | A:139 | 142.0 | 0.947 | T | -82.6 | -25.0 | 142.0 | 0.947 | 0.0 |
HOH |
3.973 |
O |
O |
||
| 3x0f | 1 | P35762 | 81.11 | 4e-45 |
X-RAY |
2015-07-01 | ASP | A:30 | A:139 | 138.0 | 0.92 | T | -124.5 | 27.4 | 138.0 | 0.92 | 0.0 |
HOH |
4.695 |
O |
O |
||
| ASP | B:30 | B:139 | 140.0 | 0.933 | T | -90.8 | -5.7 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p60033-f1 | 1 | P60033 | 100.0 | 8e-175 | ASP | A:139 | A:139 | 99.0 | 0.66 | S | -88.6 | -12.5 | |