Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr11 2416713 . A C CCDS7734.1:NM_004356.3:c.422aAc>aCc_NP_004347.1:p.141N>T Homo sapiens CD81 molecule (CD81), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
7jic 2 P60033 99.15 6e-172 EM
 2021-01-20 ASN B:152 B:141 197.0 1.0 360.0 -33.0 197.0 1.0 0.0
5tcx 1 P60033 98.3 7e-170 X-RAY
 2016-11-09 ASN A:141 A:141 84.0 0.525 H -63.7 -30.6 84.0 0.525 0.0 HOH
 8.462
 OD1
 O
6ejg 1 P60033 98.91 1e-61 X-RAY
 2018-05-30 ASN A:32 A:141 110.0 0.688 H -71.8 -30.1 110.0 0.688 0.0 HOH
 2.921
 N
 O
ASN B:32 B:141 115.0 0.719 H -79.0 -18.5 115.0 0.719 0.0 HOH
 9.423
 ND2
 O
6ejm 1 P60033 98.91 1e-61 X-RAY
 2018-05-30 ASN A:32 A:141 134.0 0.838 H -80.4 -12.0 134.0 0.838 0.0 HOH
 8.846
 C
 O
ASN B:32 B:141 94.0 0.588 360.0 144.3 94.0 0.588 0.0 HOH
 2.602
 OD1
 O
5dfv 1 P60033 97.83 7e-61 X-RAY
 2015-12-16 ASN A:32 A:141 117.0 0.731 H -61.7 -36.5 117.0 0.731 0.0
ASN B:32 B:141 121.0 0.756 H -72.3 -51.9 121.0 0.756 0.0
5dfw 1 P60033 97.83 9e-61 X-RAY
 2015-12-16 ASN A:32 A:141 64.0 0.4 -150.7 178.6 58.0 0.362 0.038 B:None:0.037
 HOH
 3.116
 ND2
 O
6ek2 1 P60033 97.83 9e-61 X-RAY
 2018-05-30 ASN A:32 A:141 94.0 0.588 H -78.5 -18.4 94.0 0.588 0.0 HOH
 3.303
 O
 O
ASN B:32 B:141 104.0 0.65 H -79.3 -17.6 104.0 0.65 0.0 HOH
 7.735
 N
 O
5m2c 1 P60033 100.0 2e-60 X-RAY
 2016-12-14 ASN A:32 A:141 108.0 0.675 H -74.7 -30.9 108.0 0.675 0.0 HOH
 7.916
 OD1
 O
ASN B:32 B:141 100.0 0.625 H -76.9 -23.2 100.0 0.625 0.0 HOH
 6.546
 H
 O
5m33 1 P60033 100.0 2e-60 X-RAY
 2016-12-14 ASN A:32 A:141 120.0 0.75 H -55.2 -42.5 120.0 0.75 0.0 EDO
HOH
 6.074
2.816
 O
O
 HO2
O
ASN B:32 B:141 149.0 0.931 360.0 169.9 149.0 0.931 0.0 EDO
EDO
HOH
 7.198
9.219
2.871
 O
HB2
O
 HO1
H21
O
5m3d 1 P60033 100.0 2e-60 X-RAY
 2016-12-14 ASN A:32 A:141 103.0 0.644 H -62.4 -19.2 103.0 0.644 0.0 EDO
HOH
 6.980
5.527
 C
H
 HO1
O
ASN B:32 B:141 109.0 0.681 H -69.9 -26.3 NA NA NA
ASN C:32 C:141 122.0 0.762 T -121.7 33.4 NA NA NA
ASN D:32 D:141 125.0 0.781 T -129.0 21.1 125.0 0.781 0.0 PO4
EDO
 7.983
2.195
 H
HB3
 O1
H12
5m3t 1 P60033 100.0 2e-60 X-RAY
 2016-12-14 ASN A:32 A:141 114.0 0.713 H -65.4 -28.1 114.0 0.713 0.0 EDO
HOH
 6.928
5.828
 C
O
 HO2
O
ASN B:32 B:141 124.0 0.775 H -55.4 -41.0 124.0 0.775 0.0 EDO
 6.735
 C
 HO2
5m4r 1 P60033 100.0 2e-60 X-RAY
 2016-12-14 ASN A:32 A:141 118.0 0.738 H -80.6 -21.9 118.0 0.738 0.0
ASN B:32 B:141 101.0 0.631 T -42.3 -25.0 NA NA NA
ASN C:32 C:141 143.0 0.894 H 58.2 177.7 NA NA NA
ASN D:32 D:141 131.0 0.819 360.0 -17.8 131.0 0.819 0.0
ASN E:32 NA:NA DO NA DO DO DO NA NA NA
3x0e 1 P60033 100.0 3e-60 X-RAY
 2015-07-01 ASN A:32 A:141 122.0 0.762 H -64.2 -39.5 122.0 0.762 0.0 MG
MG
HOH
 3.908
6.925
2.468
 N
C
H
 MG
MG
O
ASN B:32 B:141 155.0 0.969 H -67.8 -45.9 155.0 0.969 0.0 MG
HOH
 4.645
2.367
 H
H
 MG
O
6u9s 3 P60033 96.74 4e-60 X-RAY
 2020-05-13 ASN C:32 C:141 109.0 0.681 H -91.6 -27.4 109.0 0.681 0.0 HOH
 3.005
 O
 O
ASN F:32 F:141 50.0 0.312 -100.5 -179.2 NA NA NA
1g8q 1 P60033 100.0 2e-59 X-RAY
 2001-02-21 ASN A:29 A:141 115.0 0.719 H -71.7 -33.0 115.0 0.719 0.0 HOH
 2.530
 ND2
 O
ASN B:29 NA:NA DO NA DO DO DO NA NA NA
1iv5 1 P60033 100.0 2e-59 X-RAY
 2003-01-28 ASN A:29 A:141 106.0 0.662 S 68.2 -33.4 106.0 0.662 0.0 HOH
 3.371
 CB
 O
ASN B:29 B:241 67.0 0.419 T 39.6 47.2 67.0 0.419 0.0 HOH
 3.898
 C
 O
7mws 1 Q9N0J9 92.55 4e-59 X-RAY
 2021-09-15 ASN A:36 A:141 60.0 0.375 S -71.7 130.8 60.0 0.375 0.0 PG4
HOH
 6.763
3.034
 O
O
 C2
O
ASN B:36 B:141 115.0 0.719 65.6 -46.2 NA NA NA
7mwx 4 Q9N0J9 93.41 3e-57 X-RAY
 2021-09-15 ASN E:32 D:38 91.0 0.569 T -72.6 127.9 91.0 0.569 0.0
ASN H:32 H:38 7.0 NA -76.7 131.2 NA NA NA
3x0g 1 ? 94.44 1e-56 X-RAY
 2015-07-01 ASN A:32 A:141 101.0 0.631 H -85.0 -22.0 101.0 0.631 0.0 HOH
 2.988
 H
 O
3x0f 1 P35762 81.11 4e-45 X-RAY
 2015-07-01 ASN A:32 A:141 129.0 0.806 H -57.7 -48.7 129.0 0.806 0.0 HOH
 3.208
 H
 O
ASN B:32 B:141 106.0 0.662 H -68.8 -34.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p60033-f1 1 P60033 100.0 8e-175 ASN A:141 A:141 105.0 0.656 H -56.8 -31.3