Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 2417177 | . | A | C | CCDS7734.1:NM_004356.3:c.538Aac>Cac_NP_004347.1:p.180N>H | Homo sapiens CD81 molecule (CD81), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
7jic | 2 | P60033 | 99.15 | 6e-172 |
EM |
2021-01-20 | ASN | B:191 | B:180 | 80.0 | 0.5 | S | -158.0 | -142.9 | 18.0 | 0.113 | 0.387 |
A:P15391:0.388 |
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5tcx | 1 | P60033 | 98.3 | 7e-170 |
X-RAY |
2016-11-09 | ASN | A:180 | A:180 | 85.0 | 0.531 | -75.3 | -174.9 | 85.0 | 0.531 | 0.0 | |||||||
6ejg | 1 | P60033 | 98.91 | 1e-61 |
X-RAY |
2018-05-30 | ASN | A:71 | A:180 | 63.0 | 0.394 | -79.0 | 114.3 | 52.0 | 0.325 | 0.069 |
C:None:0.069 |
HOH |
4.903 |
ND2 |
O |
||
ASN | B:71 | B:180 | 72.0 | 0.45 | 62.4 | 7.3 | 62.0 | 0.388 | 0.062 |
D:None:0.062 |
HOH |
4.513 |
ND2 |
O |
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6ejm | 1 | P60033 | 98.91 | 1e-61 |
X-RAY |
2018-05-30 | ASN | A:71 | A:180 | 72.0 | 0.45 | -51.2 | 115.2 | 34.0 | 0.212 | 0.238 |
D:None:0.237 |
HOH |
3.129 |
OD1 |
O |
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ASN | B:71 | B:180 | 52.0 | 0.325 | -84.9 | 98.1 | 25.0 | 0.156 | 0.169 |
C:None:0.169 |
HOH |
3.491 |
CA |
O |
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5dfv | 1 | P60033 | 97.83 | 7e-61 |
X-RAY |
2015-12-16 | ASN | A:71 | A:180 | 62.0 | 0.388 | 360.0 | 148.5 | 62.0 | 0.388 | 0.0 | |||||||
ASN | B:71 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
5dfw | 1 | P60033 | 97.83 | 9e-61 |
X-RAY |
2015-12-16 | ASN | A:71 | A:180 | 89.0 | 0.556 | -73.8 | 177.8 | 89.0 | 0.556 | 0.0 |
HOH |
2.698 |
ND2 |
O |
|||
6ek2 | 1 | P60033 | 97.83 | 9e-61 |
X-RAY |
2018-05-30 | ASN | A:71 | A:180 | 8.0 | 0.05 | -116.1 | -12.6 | 8.0 | 0.05 | 0.0 |
HOH |
6.408 |
OD1 |
O |
|||
ASN | B:71 | B:180 | 13.0 | 0.081 | -113.4 | -17.2 | 13.0 | 0.081 | 0.0 |
HOH |
5.488 |
N |
O |
||||||||||
5m2c | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASN | A:71 | A:180 | 97.0 | 0.606 | -102.7 | 172.9 | 97.0 | 0.606 | 0.0 |
HOH |
6.573 |
N |
O |
|||
ASN | B:71 | B:180 | 98.0 | 0.613 | -104.8 | 171.5 | 98.0 | 0.613 | 0.0 |
HOH |
4.577 |
H |
O |
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5m33 | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASN | A:71 | A:180 | 69.0 | 0.431 | -156.4 | 172.8 | 69.0 | 0.431 | 0.0 |
EDO HOH |
6.008 2.355 |
HD21 HD22 |
HO1 O |
|||
ASN | B:71 | B:180 | 95.0 | 0.594 | H | -65.1 | -43.2 | 95.0 | 0.594 | 0.0 |
HOH |
4.002 |
O |
O |
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5m3d | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASN | A:71 | A:180 | 85.0 | 0.531 | -124.8 | 150.3 | 85.0 | 0.531 | 0.0 |
EDO |
5.101 |
HA |
H21 |
|||
ASN | B:71 | B:180 | 94.0 | 0.588 | -119.8 | 159.9 | NA | NA | NA | ||||||||||||||
ASN | C:71 | C:180 | 96.0 | 0.6 | -62.8 | 165.3 | NA | NA | NA | ||||||||||||||
ASN | D:71 | D:180 | 101.0 | 0.631 | -94.0 | -170.0 | 101.0 | 0.631 | 0.0 |
EDO HOH |
4.059 3.073 |
HA HD21 |
H22 O |
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5m3t | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASN | A:71 | A:180 | 98.0 | 0.613 | 60.9 | 84.1 | 98.0 | 0.613 | 0.0 |
EDO EDO HOH |
9.692 6.520 8.145 |
HD22 HD22 O |
HO2 H21 O |
|||
ASN | B:71 | B:180 | 89.0 | 0.556 | -73.9 | 171.8 | 89.0 | 0.556 | 0.0 |
EDO HOH |
4.485 8.602 |
N O |
HO1 O |
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5m4r | 1 | P60033 | 100.0 | 2e-60 |
X-RAY |
2016-12-14 | ASN | A:71 | A:180 | 123.0 | 0.769 | -72.8 | 134.0 | 123.0 | 0.769 | 0.0 | |||||||
ASN | B:71 | B:180 | 101.0 | 0.631 | -129.6 | -21.7 | NA | NA | NA | ||||||||||||||
ASN | C:71 | C:180 | 84.0 | 0.525 | -141.6 | 104.1 | NA | NA | NA | ||||||||||||||
ASN | D:71 | D:180 | 110.0 | 0.688 | -79.3 | 167.7 | 110.0 | 0.688 | 0.0 | ||||||||||||||
ASN | E:71 | E:180 | 104.0 | 0.65 | -58.2 | 149.5 | NA | NA | NA | ||||||||||||||
3x0e | 1 | P60033 | 100.0 | 3e-60 |
X-RAY |
2015-07-01 | ASN | A:71 | A:180 | 74.0 | 0.463 | -152.7 | 173.3 | 74.0 | 0.463 | 0.0 |
HOH |
2.871 |
H |
O |
|||
ASN | B:71 | B:180 | 148.0 | 0.925 | 360.0 | -173.8 | 148.0 | 0.925 | 0.0 |
HOH |
5.386 |
O |
O |
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6u9s | 3 | P60033 | 96.74 | 4e-60 |
X-RAY |
2020-05-13 | ASN | C:71 | C:180 | 159.0 | 0.994 | S | -72.2 | -39.1 | 6.0 | 0.037 | 0.957 |
A:None:0.956 |
HOH |
3.190 |
N |
O |
|
ASN | F:71 | F:180 | 159.0 | 0.994 | S | -72.5 | -39.5 | NA | NA | NA | |||||||||||||
1g8q | 1 | P60033 | 100.0 | 2e-59 |
X-RAY |
2001-02-21 | ASN | A:68 | A:180 | 71.0 | 0.444 | -163.7 | 164.5 | 71.0 | 0.444 | 0.0 |
HOH |
3.186 |
ND2 |
O |
|||
ASN | B:68 | B:280 | 86.0 | 0.537 | H | -75.9 | -32.8 | 86.0 | 0.537 | 0.0 |
HOH |
2.860 |
ND2 |
O |
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1iv5 | 1 | P60033 | 100.0 | 2e-59 |
X-RAY |
2003-01-28 | ASN | A:68 | A:180 | 67.0 | 0.419 | -125.8 | -148.7 | 67.0 | 0.419 | 0.0 |
HOH |
2.351 |
OD1 |
O |
|||
ASN | B:68 | B:280 | 94.0 | 0.588 | S | 177.4 | -77.9 | 94.0 | 0.588 | 0.0 | |||||||||||||
7mws | 1 | Q9N0J9 | 92.55 | 4e-59 |
X-RAY |
2021-09-15 | SER | A:75 | A:180 | 62.0 | 0.539 | -88.4 | 166.6 | 62.0 | 0.539 | 0.0 |
HOH |
2.881 |
N |
O |
|||
SER | B:75 | B:180 | 53.0 | 0.461 | S | -88.1 | 135.2 | NA | NA | NA | |||||||||||||
7mwx | 4 | Q9N0J9 | 93.41 | 3e-57 |
X-RAY |
2021-09-15 | SER | E:71 | D:77 | 89.0 | 0.774 | -93.2 | 16.2 | 69.0 | 0.6 | 0.174 |
A:A0A2I6PIY1:0.174 |
||||||
SER | H:71 | H:77 | 80.0 | 0.696 | S | -94.7 | 165.8 | NA | NA | NA | |||||||||||||
3x0g | 1 | ? | 94.44 | 1e-56 |
X-RAY |
2015-07-01 | ASN | A:71 | A:180 | 69.0 | 0.431 | -139.1 | 172.8 | 69.0 | 0.431 | 0.0 |
HOH |
2.685 |
HB2 |
O |
|||
3x0f | 1 | P35762 | 81.11 | 4e-45 |
X-RAY |
2015-07-01 | ASN | A:71 | A:180 | 78.0 | 0.487 | -151.8 | -171.2 | 78.0 | 0.487 | 0.0 |
HOH |
1.491 |
HD21 |
O |
|||
ASN | B:71 | B:180 | 146.0 | 0.912 | S | -70.4 | -26.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p60033-f1 | 1 | P60033 | 100.0 | 8e-175 | ASN | A:180 | A:180 | 94.0 | 0.588 | -102.4 | 167.3 |