Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr11 | 61096914 | . | A | C | CCDS31576.1:NM_001923.4:c.470aTc>aGc_NP_001914.3:p.157I>S | Homo sapiens damage specific DNA binding protein 1 (DDB1), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3e0c | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2008-09-16 | ILE | A:157 | A:157 | 0.0 | 0.0 | E | -107.6 | 135.5 | 0.0 | 0.0 | 0.0 |
HOH |
3.587 |
CG2 |
O |
||
| 5hxb | 2 | Q16531 | 100.0 | 0.0 |
X-RAY |
2016-06-29 | ILE | B:157 | Y:157 | 6.0 | 0.034 | E | -119.0 | 132.5 | 6.0 | 0.034 | 0.0 | ||||||
| ILE | D:157 | B:157 | 6.0 | 0.034 | E | -118.9 | 133.3 | NA | NA | NA | |||||||||||||
| 5jk7 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2016-10-05 | ILE | A:157 | A:157 | 0.0 | 0.0 | E | -117.4 | 126.0 | 0.0 | 0.0 | 0.0 | ||||||
| ILE | B:157 | B:157 | 0.0 | 0.0 | E | -117.2 | 126.2 | NA | NA | NA | |||||||||||||
| 5v3o | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2017-05-03 | ILE | A:157 | A:157 | 4.0 | 0.023 | -134.9 | 129.6 | 4.0 | 0.023 | 0.0 | |||||||
| 6dsz | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-12-12 | ILE | A:157 | A:157 | 12.0 | 0.069 | -94.9 | 171.6 | 12.0 | 0.069 | 0.0 | |||||||
| ILE | B:157 | B:157 | 12.0 | 0.069 | -94.9 | 171.2 | NA | NA | NA | ||||||||||||||
| 6pai | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-09-18 | ILE | A:157 | A:157 | 2.0 | 0.011 | E | -116.6 | 126.0 | 0.0 | 0.0 | 0.011 |
D:Q9BW61:0.011 |
|||||
| 6sj7 | 2 | Q16531 | 100.0 | 0.0 |
EM |
2019-12-18 | ILE | B:157 | B:157 | 8.0 | 0.046 | E | -130.6 | 125.0 | 4.0 | 0.023 | 0.023 |
D:Q9BW61:0.023 |
|||||
| 6uml | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2020-04-15 | ILE | A:157 | A:157 | 9.0 | 0.051 | E | -130.1 | 143.7 | 9.0 | 0.051 | 0.0 | ||||||
| 6xk9 | 2 | Q16531 | 100.0 | 0.0 |
X-RAY |
2020-12-02 | ILE | B:157 | Y:157 | 10.0 | 0.057 | -135.8 | 118.9 | 10.0 | 0.057 | 0.0 | |||||||
| ILE | E:157 | B:157 | 9.0 | 0.051 | -136.4 | 118.0 | NA | NA | NA | ||||||||||||||
| 7lps | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2021-06-02 | ILE | A:157 | A:157 | 0.0 | 0.0 | E | -124.2 | 133.1 | 0.0 | 0.0 | 0.0 | ||||||
| ILE | D:157 | D:157 | 1.0 | 0.006 | E | -124.5 | 133.7 | NA | NA | NA | |||||||||||||
| ILE | G:157 | G:157 | 1.0 | 0.006 | E | -124.5 | 133.0 | NA | NA | NA | |||||||||||||
| ILE | J:157 | J:157 | 1.0 | 0.006 | E | -124.6 | 133.6 | NA | NA | NA | |||||||||||||
| 7oop | 26 | Q16531 | 100.0 | 0.0 |
EM |
2021-10-06 | ILE | Z:157 | d:157 | 2.0 | 0.011 | E | -112.1 | 124.7 | 2.0 | 0.011 | 0.0 | ||||||
| 6zue | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2021-07-28 | ILE | A:159 | A:157 | 12.0 | 0.069 | -137.4 | 129.6 | 12.0 | 0.069 | 0.0 | |||||||
| 6zx9 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2021-07-21 | ILE | A:159 | A:157 | 8.0 | 0.046 | E | -122.5 | 127.1 | 8.0 | 0.046 | 0.0 |
HOH |
6.243 |
CG2 |
O |
||
| 7oo3 | 20 | Q16531 | 100.0 | 0.0 |
EM |
2021-10-06 | ILE | T:160 | d:157 | 7.0 | 0.04 | E | -111.1 | 127.6 | 7.0 | 0.04 | 0.0 | ||||||
| 7oob | 14 | Q16531 | 100.0 | 0.0 |
EM |
2021-10-13 | ILE | N:160 | d:157 | 3.0 | 0.017 | E | -109.3 | 130.8 | 3.0 | 0.017 | 0.0 | ||||||
| 7opc | 26 | Q16531 | 100.0 | 0.0 |
EM |
2021-10-13 | ILE | Z:160 | d:157 | 0.0 | 0.0 | E | -109.8 | 130.3 | 0.0 | 0.0 | 0.0 | ||||||
| 7opd | 26 | Q16531 | 100.0 | 0.0 |
EM |
2021-10-06 | ILE | Z:160 | d:157 | 0.0 | 0.0 | E | -109.9 | 130.3 | 0.0 | 0.0 | 0.0 | ||||||
| 4a0l | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2011-12-14 | ILE | A:161 | A:157 | 2.0 | 0.011 | E | -116.7 | 133.9 | 2.0 | 0.011 | 0.0 | ||||||
| ILE | C:161 | C:157 | 3.0 | 0.017 | E | -116.8 | 133.9 | NA | NA | NA | |||||||||||||
| 6r8y | 8 | Q16531 | 100.0 | 0.0 |
EM |
2019-06-12 | ILE | K:161 | K:157 | 12.0 | 0.069 | E | -124.2 | 140.3 | 12.0 | 0.069 | 0.0 | ||||||
| 6r8z | 7 | Q16531 | 100.0 | 0.0 |
EM |
2019-06-12 | ILE | K:180 | K:157 | 4.0 | 0.023 | E | -117.8 | 134.5 | 4.0 | 0.023 | 0.0 | ||||||
| 6r90 | 7 | Q16531 | 100.0 | 0.0 |
EM |
2019-06-12 | ILE | K:180 | K:157 | 1.0 | 0.006 | E | -116.1 | 132.9 | 1.0 | 0.006 | 0.0 | ||||||
| 6r91 | 7 | Q16531 | 100.0 | 0.0 |
EM |
2019-06-12 | ILE | K:180 | K:157 | 2.0 | 0.011 | E | -115.4 | 130.6 | 2.0 | 0.011 | 0.0 | ||||||
| 6r92 | 8 | Q16531 | 100.0 | 0.0 |
EM |
2019-06-12 | ILE | L:180 | K:157 | 2.0 | 0.011 | E | -116.2 | 131.3 | 2.0 | 0.011 | 0.0 | ||||||
| 4a0k | 3 | Q16531 | 100.0 | 0.0 |
X-RAY |
2011-12-14 | ILE | C:176 | C:157 | 3.0 | 0.017 | E | -116.6 | 133.6 | 3.0 | 0.017 | 0.0 | ||||||
| 4a11 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2011-12-07 | ILE | A:176 | A:157 | 2.0 | 0.011 | E | -128.2 | 136.8 | 2.0 | 0.011 | 0.0 | ||||||
| 7okq | 1 | Q16531 | 100.0 | 0.0 |
EM |
2021-10-13 | ILE | A:176 | A:157 | 21.0 | NA | E | -100.8 | 126.6 | 21.0 | NA | NA | ||||||
| ILE | E:176 | E:157 | 20.0 | NA | E | -100.7 | 126.7 | NA | NA | NA | |||||||||||||
| ILE | I:176 | I:157 | 20.0 | NA | E | -100.8 | 126.6 | NA | NA | NA | |||||||||||||
| ILE | M:176 | M:157 | 21.0 | NA | E | -100.8 | 126.6 | NA | NA | NA | |||||||||||||
| 3ei1 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2009-01-20 | ILE | A:175 | A:157 | 3.0 | 0.017 | E | -104.8 | 138.9 | 3.0 | 0.017 | 0.0 |
HOH |
3.951 |
CA |
O |
||
| 3ei2 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2009-01-20 | ILE | A:175 | A:157 | 2.0 | 0.011 | E | -116.6 | 133.9 | 2.0 | 0.011 | 0.0 |
HOH |
3.416 |
CG2 |
O |
||
| 3ei3 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2009-01-20 | ILE | A:175 | A:157 | 4.0 | 0.023 | E | -118.0 | 134.6 | 4.0 | 0.023 | 0.0 |
HOH |
3.385 |
CG2 |
O |
||
| 4ci1 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2014-07-16 | ILE | A:175 | A:157 | 2.0 | 0.011 | -130.2 | 125.8 | 2.0 | 0.011 | 0.0 | |||||||
| 4ci2 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2014-07-16 | ILE | A:175 | A:157 | 3.0 | 0.017 | -129.8 | 118.0 | 3.0 | 0.017 | 0.0 | |||||||
| 4ci3 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2014-07-16 | ILE | A:175 | A:157 | 3.0 | 0.017 | -137.4 | 125.6 | 3.0 | 0.017 | 0.0 | |||||||
| 6fcv | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-01-30 | ILE | A:175 | A:157 | 5.0 | 0.029 | E | -137.0 | 130.1 | 5.0 | 0.029 | 0.0 | ||||||
| 4tz4 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2014-08-06 | ILE | A:156 | A:157 | 1.0 | 0.006 | E | -118.8 | 134.7 | 1.0 | 0.006 | 0.0 | ||||||
| 3i7h | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 11.0 | 0.063 | E | -128.5 | 127.9 | 11.0 | 0.063 | 0.0 | ||||||
| 3i7k | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 14.0 | 0.08 | E | -131.5 | 133.8 | 14.0 | 0.08 | 0.0 | ||||||
| 3i7l | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 9.0 | 0.051 | -132.5 | 95.9 | 9.0 | 0.051 | 0.0 | |||||||
| 3i7n | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 11.0 | 0.063 | E | -116.2 | 145.3 | 11.0 | 0.063 | 0.0 | ||||||
| 3i7o | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 12.0 | 0.069 | E | -130.8 | 144.0 | 12.0 | 0.069 | 0.0 | ||||||
| 3i7p | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 10.0 | 0.057 | E | -131.9 | 132.5 | 10.0 | 0.057 | 0.0 | ||||||
| 3i89 | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 14.0 | 0.08 | E | -100.1 | 165.7 | 14.0 | 0.08 | 0.0 | ||||||
| 3i8c | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 13.0 | 0.074 | -139.0 | 150.2 | 13.0 | 0.074 | 0.0 | |||||||
| 3i8e | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-12-08 | ILE | A:160 | A:157 | 14.0 | 0.08 | E | -123.9 | 142.4 | 14.0 | 0.08 | 0.0 | ||||||
| ILE | B:160 | B:157 | 19.0 | 0.109 | E | -142.7 | 135.4 | NA | NA | NA | |||||||||||||
| 2b5l | 1 | 13435359 | 99.74 | 0.0 |
X-RAY |
2006-02-28 | ILE | A:157 | A:157 | 13.0 | 0.074 | E | -84.3 | 129.9 | 13.0 | 0.074 | 0.0 | ||||||
| ILE | B:157 | B:157 | 17.0 | 0.097 | -142.8 | 128.9 | NA | NA | NA | ||||||||||||||
| 2b5m | 1 | 13435359 | 99.74 | 0.0 |
X-RAY |
2006-02-28 | ILE | A:157 | A:157 | 12.0 | 0.069 | E | -117.3 | 138.5 | 12.0 | 0.069 | 0.0 | ||||||
| 2hye | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2006-10-03 | ILE | A:157 | A:157 | 13.0 | 0.074 | E | -96.3 | 162.7 | 13.0 | 0.074 | 0.0 | ||||||
| 4a0b | 1 | Q16531 | 99.91 | 0.0 |
X-RAY |
2011-11-30 | ILE | A:176 | A:157 | 8.0 | 0.046 | E | -117.2 | 129.9 | 8.0 | 0.046 | 0.0 | ||||||
| ILE | C:176 | C:157 | 10.0 | 0.057 | E | -142.9 | 115.2 | NA | NA | NA | |||||||||||||
| 4a0a | 1 | Q16531 | 99.91 | 0.0 |
X-RAY |
2011-11-30 | ILE | A:176 | A:157 | 10.0 | 0.057 | E | -122.1 | 137.5 | 10.0 | 0.057 | 0.0 | ||||||
| 4a08 | 1 | Q16531 | 99.91 | 0.0 |
X-RAY |
2011-11-30 | ILE | A:176 | A:157 | 0.0 | 0.0 | E | -122.7 | 132.9 | 0.0 | 0.0 | 0.0 |
HOH |
9.973 |
CG2 |
O |
||
| 4a09 | 1 | Q16531 | 99.91 | 0.0 |
X-RAY |
2011-11-30 | ILE | A:176 | A:157 | 8.0 | 0.046 | E | -110.3 | 132.6 | 8.0 | 0.046 | 0.0 |
HOH |
9.318 |
CG1 |
O |
||
| 4e54 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2012-08-08 | ILE | A:167 | A:157 | 5.0 | 0.029 | E | -115.7 | 157.1 | 5.0 | 0.029 | 0.0 | ||||||
| 4e5z | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2012-08-22 | ILE | A:167 | A:157 | 15.0 | 0.086 | -143.8 | 150.5 | 15.0 | 0.086 | 0.0 | |||||||
| 3ei4 | 1 | Q16531 | 99.74 | 0.0 |
X-RAY |
2009-01-20 | ILE | A:175 | A:157 | 9.0 | 0.051 | E | -116.3 | 135.9 | 9.0 | 0.051 | 0.0 | ||||||
| ILE | C:175 | C:157 | 8.0 | 0.046 | E | -117.1 | 134.5 | NA | NA | NA | |||||||||||||
| ILE | E:175 | E:157 | 8.0 | 0.046 | E | -116.8 | 135.4 | NA | NA | NA | |||||||||||||
| 6ud7 | 2 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-12-18 | ILE | B:157 | B:157 | 10.0 | 0.057 | E | -114.8 | 128.2 | 7.0 | 0.04 | 0.017 |
D:Q9BW61:0.017 |
HOH |
3.483 |
CA |
O |
|
| 6ue5 | 2 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-12-18 | ILE | B:157 | B:157 | 11.0 | 0.063 | E | -121.7 | 127.4 | 7.0 | 0.04 | 0.023 |
D:Q9BW61:0.023 |
HOH |
5.755 |
N |
O |
|
| 6td3 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2020-06-17 | ILE | A:161 | A:157 | 10.0 | 0.057 | E | -100.3 | 136.1 | 10.0 | 0.057 | 0.0 | ||||||
| ILE | D:161 | D:157 | 8.0 | 0.046 | E | -100.9 | 130.4 | NA | NA | NA | |||||||||||||
| ILE | G:161 | G:157 | 8.0 | 0.046 | E | -96.7 | 134.3 | NA | NA | NA | |||||||||||||
| 5fqd | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2016-02-24 | ILE | A:177 | A:157 | 1.0 | 0.006 | E | -105.7 | 134.2 | 1.0 | 0.006 | 0.0 | ||||||
| ILE | D:177 | D:157 | 11.0 | 0.063 | E | -106.3 | 134.5 | NA | NA | NA | |||||||||||||
| 6h0f | 1 | ? | 100.0 | 0.0 |
X-RAY |
2018-11-07 | ILE | A:177 | A:157 | 0.0 | 0.0 | E | -120.4 | 132.1 | 0.0 | 0.0 | 0.0 | ||||||
| ILE | D:177 | D:157 | 0.0 | 0.0 | E | -121.9 | 130.7 | NA | NA | NA | |||||||||||||
| ILE | G:177 | G:157 | 0.0 | 0.0 | E | -124.7 | 131.7 | NA | NA | NA | |||||||||||||
| ILE | J:177 | J:157 | 0.0 | 0.0 | E | -119.4 | 134.5 | NA | NA | NA | |||||||||||||
| 6h0g | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-11-07 | ILE | A:177 | A:157 | 3.0 | 0.017 | E | -123.5 | 129.2 | 3.0 | 0.017 | 0.0 | ||||||
| ILE | D:177 | D:157 | 2.0 | 0.011 | E | -123.3 | 138.8 | NA | NA | NA | |||||||||||||
| 6bn7 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-05-30 | ILE | A:185 | A:157 | 2.0 | 0.011 | E | -114.7 | 139.7 | 2.0 | 0.011 | 0.0 | ||||||
| 6bn8 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-06-06 | ILE | A:185 | A:157 | 4.0 | 0.023 | E | -125.1 | 142.8 | 4.0 | 0.023 | 0.0 | ||||||
| 6bn9 | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-05-30 | ILE | A:185 | A:157 | 4.0 | 0.023 | E | -122.3 | 143.5 | 4.0 | 0.023 | 0.0 | ||||||
| 6bnb | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-05-30 | ILE | A:185 | A:157 | 4.0 | 0.023 | E | -103.7 | 130.6 | 4.0 | 0.023 | 0.0 | ||||||
| 6boy | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2018-05-30 | ILE | A:185 | A:157 | 2.0 | 0.011 | E | -120.9 | 135.4 | 2.0 | 0.011 | 0.0 | ||||||
| 6q0r | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-11-13 | ILE | A:185 | A:157 | 10.0 | 0.057 | E | -115.9 | 134.6 | 7.0 | 0.04 | 0.017 |
E:Q9BW61:0.017 |
|||||
| 6q0v | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-11-13 | ILE | A:185 | A:157 | 11.0 | 0.063 | E | -115.6 | 136.9 | 7.0 | 0.04 | 0.023 |
E:Q9BW61:0.023 |
HOH |
6.649 |
O |
O |
|
| 6q0w | 1 | Q16531 | 100.0 | 0.0 |
X-RAY |
2019-11-13 | ILE | A:185 | A:157 | 11.0 | 0.063 | E | -116.4 | 130.1 | 9.0 | 0.051 | 0.012 |
E:Q9BW61:0.011 |
HOH |
6.658 |
N |
O |
|
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q16531-f1 | 1 | Q16531 | 100.0 | 0.0 | ILE | A:157 | A:157 | 4.0 | 0.023 | E | -109.1 | 135.1 | |