Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 67473717 . C A CCDS10222.1:NM_005902.3:c.797tCg>tAg_NP_005893.1:p.266S>* Homo sapiens SMAD family member 3 (SMAD3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1khx 1 Q15796 92.51 1e-157 X-RAY
2002-02-06 SER A:68 A:308 67.0 0.583 T -61.6 -13.8 67.0 0.583 0.0 HOH
2.649
O
O
6zvq 1 Q15796 92.51 1e-157 X-RAY
2021-06-09 SER A:68 A:308 62.0 0.539 T -69.4 -7.0 62.0 0.539 0.0 GOL
GOL
TAR
HOH
7.245
3.203
4.717
2.734
N
OG
CA
O
O1
O3
HO2
O
1mk2 1 P84022 100.0 4e-154 X-RAY
2002-10-16 SER A:47 A:265 62.0 0.539 T -41.3 -35.8 62.0 0.539 0.0 ACY
3.465
N
CH3
6m64 1 Q15796 96.1 6e-149 X-RAY
2020-11-25 SER A:49 A:308 73.0 0.635 T -67.1 -9.7 73.0 0.635 0.0 HOH
2.704
O
O
SER C:49 C:308 82.0 0.713 T -69.1 -10.5 82.0 0.713 0.0 HOH
2.699
O
O
SER E:49 E:308 66.0 0.574 T -67.9 -12.4 66.0 0.574 0.0 HOH
2.559
O
O
7co1 1 Q15796 96.1 6e-149 X-RAY
2020-11-25 SER A:49 A:308 70.0 0.609 T -67.5 -4.9 70.0 0.609 0.0
SER C:49 C:308 68.0 0.591 T -66.5 -4.3 68.0 0.591 0.0
SER E:49 E:308 65.0 0.565 T -66.8 -4.7 65.0 0.565 0.0
1u7f 1 P84022 100.0 2e-147 X-RAY
2004-09-28 SER A:39 A:266 59.0 0.513 T -61.4 -8.6 59.0 0.513 0.0 HOH
3.063
OG
O
SER C:39 C:266 62.0 0.539 T -67.3 -4.4 60.0 0.522 0.017 B:Q13485:0.017
HOH
2.748
O
O
5xoc 1 P84022 100.0 2e-147 X-RAY
2018-03-28 SER A:49 A:266 63.0 0.548 T -71.3 -17.0 63.0 0.548 0.0 HOH
5.101
N
O
1mjs 1 P84022 100.0 9e-147 X-RAY
2002-10-16 SER A:38 A:265 55.0 0.478 T -60.7 -19.2 55.0 0.478 0.0 HOH
2.684
O
O
1u7v 1 Q15796 96.97 6e-145 X-RAY
2004-09-28 SER A:39 A:308 61.0 0.53 T -64.9 -3.2 61.0 0.53 0.0
SER B:39 C:308 63.0 0.548 T -55.5 -6.6 63.0 0.548 0.0
5xod 1 Q15796 97.46 3e-144 X-RAY
2018-03-28 SER A:49 A:308 60.0 0.522 T -63.9 -11.9 60.0 0.522 0.0 HOH
2.830
O
O
5zoj 1 Q15796 97.46 4e-144 X-RAY
2018-10-10 SER A:50 A:308 61.0 0.53 T -69.3 -5.2 61.0 0.53 0.0
SER B:50 B:308 61.0 0.53 T -69.2 -6.8 61.0 0.53 0.0
SER C:50 C:308 71.0 0.617 T -68.7 -5.1 71.0 0.617 0.0
1dev 1 Q15796 97.45 9e-144 X-RAY
2000-01-21 SER A:48 A:308 56.0 0.487 T -49.7 -28.6 56.0 0.487 0.0
SER C:48 C:308 58.0 0.504 T -58.6 -25.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p84022-f1 1 P84022 100.0 0.0 SER A:266 A:266 74.0 0.643 T -69.1 -6.1
af-q15796-f1 1 Q15796 83.73 0.0 SER A:308 A:308 69.0 0.6 T -67.5 -10.5