Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 67479847 . G A CCDS10222.1:NM_005902.3:c.1154aGg>aAg_NP_005893.1:p.385R>K Homo sapiens SMAD family member 3 (SMAD3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1khx 1 Q15796 92.51 1e-157 X-RAY
2002-02-06 ARG A:187 A:427 197.0 0.876 S -66.8 -47.7 169.0 0.751 0.125 A:Q15796:0.124
HOH
2.551
NE
O
6zvq 1 Q15796 92.51 1e-157 X-RAY
2021-06-09 ARG A:187 A:427 102.0 NA S -75.9 -38.6 83.0 NA NA A:Q15796:NA
HOH
2.955
N
O
1mk2 1 P84022 100.0 4e-154 X-RAY
2002-10-16 ARG A:166 A:384 204.0 0.907 S -74.4 -52.3 204.0 0.907 0.0 ACY
2.905
NH2
O
6m64 1 Q15796 96.1 6e-149 X-RAY
2020-11-25 ARG A:168 A:427 192.0 0.853 S -68.6 -40.4 192.0 0.853 0.0 HOH
2.677
O
O
ARG C:168 C:427 185.0 0.822 S -62.7 -38.9 185.0 0.822 0.0 HOH
3.318
CD
O
ARG E:168 E:427 197.0 0.876 S -61.6 -42.5 141.0 0.627 0.249 A:Q15796:0.249
HOH
2.630
O
O
7co1 1 Q15796 96.1 6e-149 X-RAY
2020-11-25 ARG A:168 A:427 214.0 0.951 S -82.8 -34.3 214.0 0.951 0.0
ARG C:168 C:427 213.0 0.947 S -80.3 -33.4 213.0 0.947 0.0
ARG E:168 E:427 201.0 0.893 S -79.5 -33.8 201.0 0.893 0.0
1u7f 1 P84022 100.0 2e-147 X-RAY
2004-09-28 ARG A:158 A:385 207.0 0.92 S -86.1 -35.1 170.0 0.756 0.164 C:P84022:0.164
HOH
2.296
N
O
ARG C:158 C:385 231.0 1.0 S -89.4 30.5 231.0 1.0 0.0 HOH
3.931
NH2
O
5xoc 1 P84022 100.0 2e-147 X-RAY
2018-03-28 ARG A:168 A:385 193.0 0.858 S -61.3 -35.1 193.0 0.858 0.0 HOH
2.717
NH1
O
1mjs 1 P84022 100.0 9e-147 X-RAY
2002-10-16 ARG A:157 NA:NA DO NA DO DO DO NA NA NA
1u7v 1 Q15796 96.97 6e-145 X-RAY
2004-09-28 ARG A:158 A:427 207.0 0.92 S -83.9 -37.2 158.0 0.702 0.218 B:Q15796:0.218
ARG B:158 C:427 230.0 1.0 S -61.3 27.0 230.0 1.0 0.0
5xod 1 Q15796 97.46 3e-144 X-RAY
2018-03-28 ARG A:168 A:427 231.0 1.0 S -66.4 -37.4 231.0 1.0 0.0 HOH
4.431
N
O
5zoj 1 Q15796 97.46 4e-144 X-RAY
2018-10-10 ARG A:169 A:427 209.0 0.929 S -69.0 -34.9 209.0 0.929 0.0
ARG B:169 B:427 225.0 1.0 S -68.2 -40.3 225.0 1.0 0.0
ARG C:169 C:427 222.0 0.987 S -67.2 -31.8 222.0 0.987 0.0
1dev 1 Q15796 97.45 9e-144 X-RAY
2000-01-21 ARG A:167 A:427 192.0 0.853 S -57.4 -49.1 192.0 0.853 0.0
ARG C:167 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p84022-f1 1 P84022 100.0 0.0 ARG A:385 A:385 166.0 0.738 S -56.5 -22.1
af-q15796-f1 1 Q15796 83.73 0.0 ARG A:427 A:427 246.0 1.0 S -56.7 -33.3