Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44153207 . G A CCDS12628.1:NM_002659.3:c.843aaC>aaT_NP_002650.1:p.281N>N Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
2005-05-10 ASN A:259 A:259 108.0 0.675 S -89.9 -26.5 51.0 0.319 0.356 B:None:0.306
C:Q9UMV0:0.131
HOH
4.347
O
O
ASN C:259 C:259 124.0 0.775 E -96.1 161.3 34.0 0.212 0.563 D:None:0.431
E:Q9UMV0:0.256
NAG
NAG
FUC
SO4
HOH
5.790
6.331
6.858
8.522
2.777
O
C
O
N
OD1
C6
O7
C6
O3
O
ASN E:259 E:259 97.0 0.606 S -70.5 -102.3 43.0 0.269 0.337 F:None:0.294
G:Q9UMV0:0.05
SO4
HOH
9.127
5.147
N
ND2
O1
O
ASN G:259 G:259 92.0 0.575 E -95.2 170.5 15.0 0.094 0.481 A:Q9UMV0:0.212
H:None:0.35
NAG
FUC
SO4
HOH
6.373
6.350
8.139
3.401
O
O
N
ND2
O5
O2
O1
O
ASN I:259 I:259 99.0 0.619 E -96.8 170.0 25.0 0.156 0.463 K:Q9UMV0:0.263
J:None:0.294
NAG
FUC
SO4
HOH
6.020
6.478
8.709
3.044
O
O
N
ND2
C6
C6
O4
O
ASN K:259 K:259 115.0 0.719 S -64.1 -58.4 42.0 0.263 0.456 M:Q9UMV0:0.1
L:None:0.425
NAG
HOH
7.302
6.692
CB
OD1
C8
O
ASN M:259 M:259 106.0 0.662 S -89.7 -48.9 19.0 0.119 0.543 O:Q9UMV0:0.219
N:None:0.4
NAG
SO4
HOH
7.092
8.579
5.300
C
N
O
O5
O2
O
ASN O:259 O:259 112.0 0.7 E -83.9 160.1 56.0 0.35 0.35 P:None:0.35
HOH
3.862
C
O
4qti 3 Q03405 100.0 0.0 X-RAY
2015-02-25 ASN C:259 U:259 7.0 0.044 -166.8 167.5 7.0 0.044 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
2008-03-25 ASN C:261 U:259 13.0 0.081 E -110.5 176.3 13.0 0.081 0.0
3bt2 5 Q03405 100.0 0.0 X-RAY
2008-03-25 ASN E:261 U:259 30.0 0.188 S -131.6 -86.7 30.0 0.188 0.0
4k24 5 Q03405 100.0 0.0 X-RAY
2014-02-26 ASN E:261 U:259 48.0 0.3 E -115.3 128.8 48.0 0.3 0.0
3u73 1 Q03405 99.29 0.0 X-RAY
2012-04-18 CYS A:259 U:259 6.0 0.044 E -126.7 134.3 6.0 0.044 0.0
3u74 1 Q03405 99.29 0.0 X-RAY
2012-04-18 CYS A:259 U:259 3.0 0.022 E -148.6 160.3 3.0 0.022 0.0 HOH
5.451
SG
O
7e17 1 Q03405 100.0 0.0 X-RAY
2021-12-22 ASN A:261 A:259 101.0 0.631 S -123.1 166.1 101.0 0.631 0.0
ASN B:261 B:259 97.0 0.606 -110.7 152.9 97.0 0.606 0.0
7v63 1 Q03405 100.0 0.0 X-RAY
2021-12-22 ASN A:261 NA:NA DO NA DO DO DO NA NA NA
ASN B:261 NA:NA DO NA DO DO DO NA NA NA
2fd6 4 Q03405 100.0 0.0 X-RAY
2006-02-21 ASN D:260 U:259 39.0 0.244 S -111.7 -97.9 39.0 0.244 0.0 HOH
2.931
O
O
2i9b 2 Q03405 98.56 0.0 X-RAY
2007-01-02 ASN E:261 E:259 17.0 0.106 B -123.2 -180.0 17.0 0.106 0.0 SO4
HOH
3.738
4.707
ND2
OD1
O1
O
ASN F:261 F:259 19.0 0.119 B -124.1 -178.1 NA NA NA
ASN G:261 G:259 40.0 0.25 B -121.0 176.5 NA NA NA
ASN H:261 H:259 41.0 0.256 B -120.7 176.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 ASN A:281 A:281 2.0 0.013 E -123.1 165.8