Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 44153207 | . | G | A | CCDS12628.1:NM_002659.3:c.843aaC>aaT_NP_002650.1:p.281N>N | Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ywh | 1 | Q9UMV0 | 99.68 | 0.0 |
X-RAY |
2005-05-10 | ASN | A:259 | A:259 | 108.0 | 0.675 | S | -89.9 | -26.5 | 51.0 | 0.319 | 0.356 |
B:None:0.306 C:Q9UMV0:0.131 |
HOH |
4.347 |
O |
O |
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ASN | C:259 | C:259 | 124.0 | 0.775 | E | -96.1 | 161.3 | 34.0 | 0.212 | 0.563 |
D:None:0.431 E:Q9UMV0:0.256 |
NAG NAG FUC SO4 HOH |
5.790 6.331 6.858 8.522 2.777 |
O C O N OD1 |
C6 O7 C6 O3 O |
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ASN | E:259 | E:259 | 97.0 | 0.606 | S | -70.5 | -102.3 | 43.0 | 0.269 | 0.337 |
F:None:0.294 G:Q9UMV0:0.05 |
SO4 HOH |
9.127 5.147 |
N ND2 |
O1 O |
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ASN | G:259 | G:259 | 92.0 | 0.575 | E | -95.2 | 170.5 | 15.0 | 0.094 | 0.481 |
A:Q9UMV0:0.212 H:None:0.35 |
NAG FUC SO4 HOH |
6.373 6.350 8.139 3.401 |
O O N ND2 |
O5 O2 O1 O |
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ASN | I:259 | I:259 | 99.0 | 0.619 | E | -96.8 | 170.0 | 25.0 | 0.156 | 0.463 |
K:Q9UMV0:0.263 J:None:0.294 |
NAG FUC SO4 HOH |
6.020 6.478 8.709 3.044 |
O O N ND2 |
C6 C6 O4 O |
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ASN | K:259 | K:259 | 115.0 | 0.719 | S | -64.1 | -58.4 | 42.0 | 0.263 | 0.456 |
M:Q9UMV0:0.1 L:None:0.425 |
NAG HOH |
7.302 6.692 |
CB OD1 |
C8 O |
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ASN | M:259 | M:259 | 106.0 | 0.662 | S | -89.7 | -48.9 | 19.0 | 0.119 | 0.543 |
O:Q9UMV0:0.219 N:None:0.4 |
NAG SO4 HOH |
7.092 8.579 5.300 |
C N O |
O5 O2 O |
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ASN | O:259 | O:259 | 112.0 | 0.7 | E | -83.9 | 160.1 | 56.0 | 0.35 | 0.35 |
P:None:0.35 |
HOH |
3.862 |
C |
O |
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4qti | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2015-02-25 | ASN | C:259 | U:259 | 7.0 | 0.044 | -166.8 | 167.5 | 7.0 | 0.044 | 0.0 | |||||||
3bt1 | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | ASN | C:261 | U:259 | 13.0 | 0.081 | E | -110.5 | 176.3 | 13.0 | 0.081 | 0.0 | ||||||
3bt2 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | ASN | E:261 | U:259 | 30.0 | 0.188 | S | -131.6 | -86.7 | 30.0 | 0.188 | 0.0 | ||||||
4k24 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2014-02-26 | ASN | E:261 | U:259 | 48.0 | 0.3 | E | -115.3 | 128.8 | 48.0 | 0.3 | 0.0 | ||||||
3u73 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | CYS | A:259 | U:259 | 6.0 | 0.044 | E | -126.7 | 134.3 | 6.0 | 0.044 | 0.0 | ||||||
3u74 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | CYS | A:259 | U:259 | 3.0 | 0.022 | E | -148.6 | 160.3 | 3.0 | 0.022 | 0.0 |
HOH |
5.451 |
SG |
O |
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7e17 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | ASN | A:261 | A:259 | 101.0 | 0.631 | S | -123.1 | 166.1 | 101.0 | 0.631 | 0.0 | ||||||
ASN | B:261 | B:259 | 97.0 | 0.606 | -110.7 | 152.9 | 97.0 | 0.606 | 0.0 | ||||||||||||||
7v63 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | ASN | A:261 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
ASN | B:261 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
2fd6 | 4 | Q03405 | 100.0 | 0.0 |
X-RAY |
2006-02-21 | ASN | D:260 | U:259 | 39.0 | 0.244 | S | -111.7 | -97.9 | 39.0 | 0.244 | 0.0 |
HOH |
2.931 |
O |
O |
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2i9b | 2 | Q03405 | 98.56 | 0.0 |
X-RAY |
2007-01-02 | ASN | E:261 | E:259 | 17.0 | 0.106 | B | -123.2 | -180.0 | 17.0 | 0.106 | 0.0 |
SO4 HOH |
3.738 4.707 |
ND2 OD1 |
O1 O |
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ASN | F:261 | F:259 | 19.0 | 0.119 | B | -124.1 | -178.1 | NA | NA | NA | |||||||||||||
ASN | G:261 | G:259 | 40.0 | 0.25 | B | -121.0 | 176.5 | NA | NA | NA | |||||||||||||
ASN | H:261 | H:259 | 41.0 | 0.256 | B | -120.7 | 176.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03405-f1 | 1 | Q03405 | 100.0 | 0.0 | ASN | A:281 | A:281 | 2.0 | 0.013 | E | -123.1 | 165.8 |