Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44153248 . T A CCDS12628.1:NM_002659.3:c.802Atg>Ttg_NP_002650.1:p.268M>L Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 MET A:246 A:246 4.0 0.022 G -57.7 -14.6 1.0 0.005 0.017 B:None:0.016
 SO4
HOH
 8.537
7.443
 O
N
 O4
O
MET C:246 C:246 5.0 0.027 G -47.3 -29.2 2.0 0.011 0.016 D:None:0.016
 SO4
SO4
HOH
 8.354
8.193
5.296
 O
CE
N
 O3
O2
O
MET E:246 E:246 4.0 0.022 G -58.4 -21.3 3.0 0.016 0.006 F:None:0.005
 SO4
SO4
HOH
 8.431
7.727
5.096
 O
CE
O
 O4
O4
O
MET G:246 G:246 6.0 0.032 G -53.5 -27.5 1.0 0.005 0.027 H:None:0.027
 SO4
SO4
HOH
 8.520
9.356
7.036
 O
SD
CE
 O4
O3
O
MET I:246 I:246 5.0 0.027 G -53.4 -31.4 2.0 0.011 0.016 J:None:0.016
 SO4
SO4
HOH
 8.496
9.031
8.766
 O
SD
N
 O2
O1
O
MET K:246 K:246 5.0 0.027 G -51.3 -24.9 1.0 0.005 0.022 L:None:0.022
 SO4
HOH
 8.567
7.213
 O
O
 O1
O
MET M:246 M:246 4.0 0.022 G -53.7 -22.0 0.0 0.0 0.022 N:None:0.022
 SO4
SO4
HOH
 8.801
9.328
6.621
 O
SD
O
 O2
O3
O
MET O:246 O:246 3.0 0.016 G -54.0 -26.8 0.0 0.0 0.016 P:None:0.016
 SO4
HOH
 8.517
7.678
 O
N
 O4
O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 MET C:246 U:246 2.0 0.011 T -61.0 -37.0 2.0 0.011 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 MET C:248 U:246 7.0 0.038 T -68.3 -35.5 7.0 0.038 0.0
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 MET E:248 U:246 27.0 0.146 G -79.9 -26.9 27.0 0.146 0.0 HOH
 5.190
 N
 O
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 MET E:248 U:246 9.0 0.049 H -67.3 -17.5 1.0 0.005 0.044 A:P00749:0.043
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 MET A:246 U:246 10.0 0.054 G -52.1 -17.8 5.0 0.027 0.027 B:P00749:0.027
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 MET A:246 U:246 1.0 0.005 G -75.4 -11.3 1.0 0.005 0.0 HOH
 4.916
 N
 O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 MET A:248 A:246 4.0 0.022 H -56.0 -37.0 4.0 0.022 0.0
MET B:248 B:246 19.0 0.103 H -41.0 -34.8 19.0 0.103 0.0
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 MET A:248 A:246 57.0 0.308 G -84.4 -1.2 57.0 0.308 0.0
MET B:248 B:246 55.0 0.297 G -82.7 -7.6 55.0 0.297 0.0
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 MET D:247 U:246 12.0 0.065 G -83.6 -9.6 12.0 0.065 0.0 PG4
HOH
 6.814
5.040
 N
N
 O3
O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 MET E:248 NA:NA DO NA DO DO DO NA NA NA
MET F:248 NA:NA DO NA DO DO DO NA NA NA
MET G:248 NA:NA DO NA DO DO DO NA NA NA
MET H:248 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 MET A:268 A:268 2.0 0.011 G -65.9 -18.7