Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 44153268 | . | C | A | CCDS12628.1:NM_002659.3:c.782aGa>aTa_NP_002650.1:p.261R>I | Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ywh | 1 | Q9UMV0 | 99.68 | 0.0 |
X-RAY |
2005-05-10 | ARG | A:239 | A:239 | 5.0 | 0.022 | E | -129.3 | 154.7 | 5.0 | 0.022 | 0.0 |
HOH |
7.171 |
NH2 |
O |
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ARG | C:239 | C:239 | 24.0 | 0.107 | E | -132.4 | 137.6 | 24.0 | 0.107 | 0.0 |
SO4 HOH |
8.297 2.690 |
N NH2 |
O2 O |
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ARG | E:239 | E:239 | 4.0 | 0.018 | E | -128.6 | 136.1 | 4.0 | 0.018 | 0.0 |
SO4 HOH |
8.258 2.901 |
N NH1 |
O1 O |
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ARG | G:239 | G:239 | 14.0 | 0.062 | E | -133.5 | 142.7 | 14.0 | 0.062 | 0.0 |
NAG SO4 HOH |
9.156 8.118 2.690 |
O N NH2 |
C8 O3 O |
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ARG | I:239 | I:239 | 6.0 | 0.027 | E | -112.0 | 133.4 | 6.0 | 0.027 | 0.0 |
SO4 HOH |
8.023 3.847 |
N NH2 |
O2 O |
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ARG | K:239 | K:239 | 11.0 | 0.049 | E | -133.2 | 147.5 | 11.0 | 0.049 | 0.0 |
HOH |
9.873 |
NH2 |
O |
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ARG | M:239 | M:239 | 14.0 | 0.062 | E | -120.1 | 141.1 | 14.0 | 0.062 | 0.0 |
SO4 HOH |
7.701 2.802 |
N NH2 |
O4 O |
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ARG | O:239 | O:239 | 6.0 | 0.027 | E | -126.9 | 137.5 | 6.0 | 0.027 | 0.0 |
NAG HOH |
9.958 8.187 |
O N |
O7 O |
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4qti | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2015-02-25 | ARG | C:239 | U:239 | 3.0 | 0.013 | E | -138.3 | 152.9 | 3.0 | 0.013 | 0.0 | ||||||
3bt1 | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | ARG | C:241 | U:239 | 20.0 | 0.089 | E | -135.4 | 139.6 | 20.0 | 0.089 | 0.0 | ||||||
3bt2 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | ARG | E:241 | U:239 | 24.0 | 0.107 | E | -117.2 | 150.2 | 24.0 | 0.107 | 0.0 | ||||||
4k24 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2014-02-26 | ARG | E:241 | U:239 | 17.0 | 0.076 | E | -133.0 | 134.1 | 17.0 | 0.076 | 0.0 | ||||||
3u73 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | ARG | A:239 | U:239 | 8.0 | 0.036 | E | -121.2 | 143.1 | 8.0 | 0.036 | 0.0 |
NAG |
9.834 |
O |
O7 |
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3u74 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | ARG | A:239 | U:239 | 3.0 | 0.013 | E | -127.3 | 145.8 | 3.0 | 0.013 | 0.0 |
HOH |
3.671 |
NH1 |
O |
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7e17 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | ARG | A:241 | A:239 | 7.0 | 0.031 | E | -133.6 | 150.8 | 7.0 | 0.031 | 0.0 | ||||||
ARG | B:241 | B:239 | 3.0 | 0.013 | E | -125.7 | 147.6 | 3.0 | 0.013 | 0.0 | |||||||||||||
7v63 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | ARG | A:241 | A:239 | 2.0 | 0.009 | E | -134.9 | 149.1 | 2.0 | 0.009 | 0.0 | ||||||
ARG | B:241 | B:239 | 5.0 | 0.022 | E | -132.3 | 146.4 | 5.0 | 0.022 | 0.0 | |||||||||||||
2fd6 | 4 | Q03405 | 100.0 | 0.0 |
X-RAY |
2006-02-21 | ARG | D:240 | U:239 | 23.0 | 0.102 | E | -135.0 | 147.0 | 23.0 | 0.102 | 0.0 |
HOH |
2.471 |
NH2 |
O |
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2i9b | 2 | Q03405 | 98.56 | 0.0 |
X-RAY |
2007-01-02 | ARG | E:241 | E:239 | 2.0 | 0.009 | E | -127.3 | 141.1 | 2.0 | 0.009 | 0.0 |
HOH |
9.026 |
O |
O |
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ARG | F:241 | F:239 | 3.0 | 0.013 | E | -125.8 | 140.5 | NA | NA | NA | |||||||||||||
ARG | G:241 | G:239 | 4.0 | 0.018 | E | -140.1 | 142.5 | NA | NA | NA | |||||||||||||
ARG | H:241 | H:239 | 4.0 | 0.018 | E | -140.1 | 142.4 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03405-f1 | 1 | Q03405 | 100.0 | 0.0 | ARG | A:261 | A:261 | 2.0 | 0.009 | E | -126.5 | 145.8 |