Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44153274 . A C CCDS12628.1:NM_002659.3:c.776aTg>aGg_NP_002650.1:p.259M>R Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
2005-05-10 MET A:237 A:237 7.0 0.038 E -134.0 142.7 7.0 0.038 0.0 HOH
5.869
SD
O
MET C:237 C:237 8.0 0.043 E -137.3 171.4 8.0 0.043 0.0 FUC
SO4
HOH
6.831
6.868
5.230
CB
O
SD
C6
O3
O
MET E:237 E:237 22.0 0.119 E -145.1 144.8 22.0 0.119 0.0 SO4
HOH
6.779
3.462
O
CE
O1
O
MET G:237 G:237 14.0 0.076 E -151.2 159.7 14.0 0.076 0.0 FUC
SO4
HOH
7.942
6.614
4.849
SD
O
SD
O3
O1
O
MET I:237 I:237 20.0 0.108 E -141.7 147.0 20.0 0.108 0.0 FUC
SO4
HOH
7.235
6.940
4.682
CG
O
CE
C6
O2
O
MET K:237 K:237 23.0 0.124 E -142.2 168.2 23.0 0.124 0.0 HOH
8.057
O
O
MET M:237 M:237 20.0 0.108 E -133.7 155.5 20.0 0.108 0.0 SO4
HOH
6.574
4.887
O
CE
O2
O
MET O:237 O:237 29.0 0.157 E -137.5 154.6 29.0 0.157 0.0 HOH
7.689
O
O
4qti 3 Q03405 100.0 0.0 X-RAY
2015-02-25 MET C:237 U:237 26.0 0.141 E -132.3 153.8 26.0 0.141 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
2008-03-25 MET C:239 U:237 22.0 0.119 E -121.6 151.0 22.0 0.119 0.0 NAG
8.833
N
C8
3bt2 5 Q03405 100.0 0.0 X-RAY
2008-03-25 MET E:239 U:237 22.0 0.119 E -154.0 143.1 22.0 0.119 0.0 NAG
8.876
N
C1
4k24 5 Q03405 100.0 0.0 X-RAY
2014-02-26 MET E:239 U:237 27.0 0.146 E -143.2 163.5 27.0 0.146 0.0 NAG
8.238
N
O7
3u73 1 Q03405 99.29 0.0 X-RAY
2012-04-18 MET A:237 U:237 20.0 0.108 E -133.3 150.2 20.0 0.108 0.0 NAG
8.820
N
O5
3u74 1 Q03405 99.29 0.0 X-RAY
2012-04-18 MET A:237 U:237 25.0 0.135 E -150.9 150.3 25.0 0.135 0.0 NAG
HOH
8.508
7.295
N
O
C1
O
7e17 1 Q03405 100.0 0.0 X-RAY
2021-12-22 MET A:239 A:237 31.0 0.168 E -155.6 143.6 31.0 0.168 0.0 NAG
8.471
N
C8
MET B:239 B:237 34.0 0.184 -149.7 143.5 34.0 0.184 0.0 NAG
9.118
N
O5
7v63 1 Q03405 100.0 0.0 X-RAY
2021-12-22 MET A:239 A:237 16.0 0.086 E -153.6 144.1 16.0 0.086 0.0
MET B:239 B:237 30.0 0.162 E -154.3 142.8 30.0 0.162 0.0 NAG
9.450
N
C1
2fd6 4 Q03405 100.0 0.0 X-RAY
2006-02-21 MET D:238 U:237 20.0 0.108 E -160.1 145.3 20.0 0.108 0.0 NDG
HOH
9.218
4.492
CE
CE
C8
O
2i9b 2 Q03405 98.56 0.0 X-RAY
2007-01-02 MET E:239 E:237 32.0 0.173 E -105.1 161.1 32.0 0.173 0.0
MET F:239 F:237 33.0 0.178 E -103.4 160.1 NA NA NA
MET G:239 G:237 36.0 0.195 -151.6 139.5 NA NA NA
MET H:239 H:237 35.0 0.189 -151.0 137.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 MET A:259 A:259 11.0 0.059 E -138.2 138.6