Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 44153274 | . | A | C | CCDS12628.1:NM_002659.3:c.776aTg>aGg_NP_002650.1:p.259M>R | Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ywh | 1 | Q9UMV0 | 99.68 | 0.0 |
X-RAY |
2005-05-10 | MET | A:237 | A:237 | 7.0 | 0.038 | E | -134.0 | 142.7 | 7.0 | 0.038 | 0.0 |
HOH |
5.869 |
SD |
O |
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MET | C:237 | C:237 | 8.0 | 0.043 | E | -137.3 | 171.4 | 8.0 | 0.043 | 0.0 |
FUC SO4 HOH |
6.831 6.868 5.230 |
CB O SD |
C6 O3 O |
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MET | E:237 | E:237 | 22.0 | 0.119 | E | -145.1 | 144.8 | 22.0 | 0.119 | 0.0 |
SO4 HOH |
6.779 3.462 |
O CE |
O1 O |
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MET | G:237 | G:237 | 14.0 | 0.076 | E | -151.2 | 159.7 | 14.0 | 0.076 | 0.0 |
FUC SO4 HOH |
7.942 6.614 4.849 |
SD O SD |
O3 O1 O |
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MET | I:237 | I:237 | 20.0 | 0.108 | E | -141.7 | 147.0 | 20.0 | 0.108 | 0.0 |
FUC SO4 HOH |
7.235 6.940 4.682 |
CG O CE |
C6 O2 O |
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MET | K:237 | K:237 | 23.0 | 0.124 | E | -142.2 | 168.2 | 23.0 | 0.124 | 0.0 |
HOH |
8.057 |
O |
O |
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MET | M:237 | M:237 | 20.0 | 0.108 | E | -133.7 | 155.5 | 20.0 | 0.108 | 0.0 |
SO4 HOH |
6.574 4.887 |
O CE |
O2 O |
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MET | O:237 | O:237 | 29.0 | 0.157 | E | -137.5 | 154.6 | 29.0 | 0.157 | 0.0 |
HOH |
7.689 |
O |
O |
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4qti | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2015-02-25 | MET | C:237 | U:237 | 26.0 | 0.141 | E | -132.3 | 153.8 | 26.0 | 0.141 | 0.0 | ||||||
3bt1 | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | MET | C:239 | U:237 | 22.0 | 0.119 | E | -121.6 | 151.0 | 22.0 | 0.119 | 0.0 |
NAG |
8.833 |
N |
C8 |
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3bt2 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | MET | E:239 | U:237 | 22.0 | 0.119 | E | -154.0 | 143.1 | 22.0 | 0.119 | 0.0 |
NAG |
8.876 |
N |
C1 |
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4k24 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2014-02-26 | MET | E:239 | U:237 | 27.0 | 0.146 | E | -143.2 | 163.5 | 27.0 | 0.146 | 0.0 |
NAG |
8.238 |
N |
O7 |
||
3u73 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | MET | A:237 | U:237 | 20.0 | 0.108 | E | -133.3 | 150.2 | 20.0 | 0.108 | 0.0 |
NAG |
8.820 |
N |
O5 |
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3u74 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | MET | A:237 | U:237 | 25.0 | 0.135 | E | -150.9 | 150.3 | 25.0 | 0.135 | 0.0 |
NAG HOH |
8.508 7.295 |
N O |
C1 O |
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7e17 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | MET | A:239 | A:237 | 31.0 | 0.168 | E | -155.6 | 143.6 | 31.0 | 0.168 | 0.0 |
NAG |
8.471 |
N |
C8 |
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MET | B:239 | B:237 | 34.0 | 0.184 | -149.7 | 143.5 | 34.0 | 0.184 | 0.0 |
NAG |
9.118 |
N |
O5 |
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7v63 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | MET | A:239 | A:237 | 16.0 | 0.086 | E | -153.6 | 144.1 | 16.0 | 0.086 | 0.0 | ||||||
MET | B:239 | B:237 | 30.0 | 0.162 | E | -154.3 | 142.8 | 30.0 | 0.162 | 0.0 |
NAG |
9.450 |
N |
C1 |
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2fd6 | 4 | Q03405 | 100.0 | 0.0 |
X-RAY |
2006-02-21 | MET | D:238 | U:237 | 20.0 | 0.108 | E | -160.1 | 145.3 | 20.0 | 0.108 | 0.0 |
NDG HOH |
9.218 4.492 |
CE CE |
C8 O |
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2i9b | 2 | Q03405 | 98.56 | 0.0 |
X-RAY |
2007-01-02 | MET | E:239 | E:237 | 32.0 | 0.173 | E | -105.1 | 161.1 | 32.0 | 0.173 | 0.0 | ||||||
MET | F:239 | F:237 | 33.0 | 0.178 | E | -103.4 | 160.1 | NA | NA | NA | |||||||||||||
MET | G:239 | G:237 | 36.0 | 0.195 | -151.6 | 139.5 | NA | NA | NA | ||||||||||||||
MET | H:239 | H:237 | 35.0 | 0.189 | -151.0 | 137.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03405-f1 | 1 | Q03405 | 100.0 | 0.0 | MET | A:259 | A:259 | 11.0 | 0.059 | E | -138.2 | 138.6 |