Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44156470 . C A CCDS33041.1:NM_001005376.2:c.661Ggg>Tgg_NP_001005376.1:p.221G>W Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 GLY A:199 A:199 0.0 0.0 E 141.0 -152.8 0.0 0.0 0.0 HOH
 7.929
 C
 O
GLY C:199 C:199 0.0 0.0 E 108.2 -148.5 0.0 0.0 0.0 FUC
SO4
HOH
 9.227
7.588
8.516
 O
N
CA
 C6
O3
O
GLY E:199 E:199 7.0 0.093 E 142.3 -155.7 7.0 0.093 0.0 SO4
HOH
 7.783
3.690
 N
CA
 O1
O
GLY G:199 G:199 4.0 0.053 E 142.4 -160.1 4.0 0.053 0.0 NAG
SO4
HOH
 9.219
7.495
6.471
 N
N
CA
 C8
O2
O
GLY I:199 I:199 0.0 0.0 E 129.9 -166.6 0.0 0.0 0.0 FUC
SO4
HOH
 9.466
7.512
5.262
 O
N
CA
 C6
O2
O
GLY K:199 K:199 5.0 0.067 E 129.7 -146.2 5.0 0.067 0.0 HOH
 4.347
 CA
 O
GLY M:199 M:199 8.0 0.107 E 141.9 -157.6 8.0 0.107 0.0 SO4
HOH
 7.870
3.816
 N
CA
 O4
O
GLY O:199 O:199 0.0 0.0 E 144.2 -161.3 0.0 0.0 0.0 HOH
 9.275
 N
 O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 GLY C:199 U:199 11.0 0.147 E 142.5 -153.4 11.0 0.147 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 GLY C:201 U:199 6.0 0.08 S 78.3 -168.7 6.0 0.08 0.0 NAG
 6.245
 C
 O5
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 GLY E:201 U:199 14.0 0.187 E 132.1 -121.9 14.0 0.187 0.0 NAG
NAG
 5.841
9.999
 C
C
 O5
C8
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 GLY E:201 U:199 17.0 0.227 E 111.6 -178.6 17.0 0.227 0.0 NAG
 6.152
 C
 O5
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 GLY A:199 U:199 10.0 0.133 E 161.3 -130.8 10.0 0.133 0.0 NAG
NAG
NAG
 9.697
6.012
8.642
 N
C
CA
 C8
O5
C8
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 GLY A:199 U:199 12.0 0.16 E 138.5 -135.0 12.0 0.16 0.0 NAG
HOH
 5.617
6.289
 C
N
 O5
O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 GLY A:201 A:199 6.0 0.08 E 144.6 -168.3 6.0 0.08 0.0 NAG
 4.932
 CA
 C8
GLY B:201 B:199 9.0 0.12 S 126.3 -168.2 9.0 0.12 0.0 NAG
 5.809
 C
 O6
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 GLY A:201 A:199 16.0 0.213 E 112.0 -168.7 16.0 0.213 0.0
GLY B:201 B:199 19.0 0.253 S 114.3 -57.5 19.0 0.253 0.0 NAG
 6.141
 O
 O6
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 GLY D:200 U:199 12.0 0.16 E 127.2 -127.4 12.0 0.16 0.0 NDG
HOH
 6.525
7.050
 C
N
 O1
O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 GLY E:201 E:199 22.0 0.293 S 59.2 -165.7 22.0 0.293 0.0
GLY F:201 F:199 23.0 0.307 S 59.1 -164.7 NA NA NA
GLY G:201 G:199 9.0 0.12 S 130.1 -164.2 NA NA NA
GLY H:201 H:199 8.0 0.107 S 131.6 -163.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 GLY A:221 A:221 17.0 0.227 E 136.3 -136.5