Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44156472 . T A CCDS33041.1:NM_001005376.2:c.659aAg>aTg_NP_001005376.1:p.220K>M Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 LYS A:198 A:198 89.0 0.445 E -159.4 126.6 89.0 0.445 0.0 NAG
HOH
 6.863
6.713
 CE
CD
 O7
O
LYS C:198 C:198 85.0 0.425 E -142.2 126.9 85.0 0.425 0.0 NAG
SO4
HOH
 9.789
4.807
3.372
 N
CD
NZ
 C1
O1
O
LYS E:198 E:198 62.0 0.31 E -152.3 124.2 62.0 0.31 0.0 SO4
HOH
 4.601
4.244
 CD
NZ
 O3
O
LYS G:198 G:198 56.0 0.28 E -157.6 120.1 56.0 0.28 0.0 NAG
SO4
HOH
 6.623
2.048
3.377
 N
NZ
CD
 C8
O2
O
LYS I:198 I:198 58.0 0.29 E -149.6 130.9 58.0 0.29 0.0 SO4
HOH
 3.564
3.810
 CE
CD
 O2
O
LYS K:198 K:198 79.0 0.395 E -153.7 113.4 79.0 0.395 0.0 NAG
HOH
 9.425
4.738
 N
O
 C8
O
LYS M:198 M:198 96.0 0.48 E -139.1 139.1 96.0 0.48 0.0 NAG
SO4
HOH
 9.507
5.326
3.044
 N
CB
NZ
 C8
O4
O
LYS O:198 O:198 88.0 0.44 E -154.4 112.1 88.0 0.44 0.0 NAG
HOH
 8.413
7.423
 N
CG
 O7
O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 LYS C:198 U:198 46.0 0.23 E -156.4 140.5 46.0 0.23 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 LYS C:200 U:198 73.0 0.365 -121.6 -172.1 73.0 0.365 0.0 NAG
 7.651
 NZ
 C6
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 LYS E:200 U:198 85.0 0.425 E -157.2 149.6 85.0 0.425 0.0 NAG
 7.756
 O
 O6
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 LYS E:200 U:198 69.0 0.345 E -141.5 150.5 69.0 0.345 0.0 NAG
 8.542
 O
 O5
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 LYS A:198 U:198 52.0 0.26 E -178.9 107.7 52.0 0.26 0.0 NAG
NAG
NAG
 6.676
7.428
9.863
 NZ
O
O
 O7
O6
C8
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 LYS A:198 U:198 44.0 0.22 E -159.2 144.6 44.0 0.22 0.0 NAG
HOH
 8.191
3.173
 O
CG
 O5
O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 LYS A:200 A:198 81.0 0.405 E -165.2 126.8 81.0 0.405 0.0 NAG
 6.135
 O
 C8
LYS B:200 B:198 67.0 0.335 E -170.7 141.9 67.0 0.335 0.0 NAG
 7.502
 O
 O6
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 LYS A:200 A:198 102.0 0.51 E -145.7 145.9 102.0 0.51 0.0
LYS B:200 B:198 64.0 0.32 E -153.3 151.7 64.0 0.32 0.0 NAG
 7.729
 O
 O6
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 LYS D:199 U:198 89.0 0.445 E -162.5 143.3 89.0 0.445 0.0 NDG
HOH
 8.830
3.084
 O
CD
 O6
O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 LYS E:200 E:198 47.0 0.235 -157.5 -167.7 47.0 0.235 0.0
LYS F:200 F:198 46.0 0.23 -157.9 -168.1 NA NA NA
LYS G:200 G:198 37.0 0.185 E -170.2 119.2 NA NA NA
LYS H:200 H:198 39.0 0.195 E -171.4 117.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 LYS A:220 A:220 43.0 0.215 E -147.0 144.9