Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44169522 . T A CCDS33041.1:NM_001005376.2:c.256Acc>Tcc_NP_001005376.1:p.86T>S Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
2005-05-10 THR A:64 A:64 15.0 0.107 E -85.2 135.6 7.0 0.05 0.057 B:None:0.057
HOH
4.634
C
O
THR C:64 C:64 9.0 0.064 E -85.0 134.9 9.0 0.064 0.0 HOH
4.837
OG1
O
THR E:64 E:64 16.0 0.114 E -100.9 116.6 10.0 0.071 0.043 F:None:0.043
HOH
2.512
OG1
O
THR G:64 G:64 8.0 0.057 E -82.4 137.1 6.0 0.043 0.014 H:None:0.014
HOH
7.762
N
O
THR I:64 I:64 11.0 0.079 E -85.0 130.0 3.0 0.021 0.058 K:Q9UMV0:0.029
J:None:0.036
HOH
7.390
N
O
THR K:64 K:64 11.0 0.079 E -100.9 119.0 6.0 0.043 0.036 L:None:0.036
HOH
2.599
OG1
O
THR M:64 M:64 9.0 0.064 E -79.7 131.5 2.0 0.014 0.05 O:Q9UMV0:0.036
N:None:0.021
HOH
2.668
OG1
O
THR O:64 O:64 13.0 0.093 E -115.9 116.4 4.0 0.029 0.064 P:None:0.064
HOH
2.526
OG1
O
4qti 3 Q03405 100.0 0.0 X-RAY
2015-02-25 THR C:64 U:64 7.0 0.05 E -100.6 135.6 7.0 0.05 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
2008-03-25 THR C:66 U:64 24.0 0.171 E -114.8 146.2 13.0 0.093 0.078 A:P00749:0.079
3bt2 5 Q03405 100.0 0.0 X-RAY
2008-03-25 THR E:66 U:64 11.0 0.079 E -128.3 134.6 3.0 0.021 0.058 A:P00749:0.057
4k24 5 Q03405 100.0 0.0 X-RAY
2014-02-26 THR E:66 U:64 13.0 0.093 E -120.6 116.9 4.0 0.029 0.064 A:P00749:0.064
3u73 1 Q03405 99.29 0.0 X-RAY
2012-04-18 THR A:64 U:64 12.0 0.086 E -91.3 141.0 2.0 0.014 0.072 B:P00749:0.071
3u74 1 Q03405 99.29 0.0 X-RAY
2012-04-18 THR A:64 U:64 9.0 0.064 E -115.8 133.2 9.0 0.064 0.0 HOH
2.695
OG1
O
7e17 1 Q03405 100.0 0.0 X-RAY
2021-12-22 THR A:66 A:64 43.0 0.307 E -112.5 123.7 21.0 0.15 0.157 B:Q03405:0.157
THR B:66 B:64 37.0 0.264 E -98.1 145.4 14.0 0.1 0.164 A:Q03405:0.164
7v63 1 Q03405 100.0 0.0 X-RAY
2021-12-22 THR A:66 A:64 59.0 0.421 E -127.2 143.5 59.0 0.421 0.0
THR B:66 B:64 55.0 0.393 E -124.0 146.6 55.0 0.393 0.0
2fd6 4 Q03405 100.0 0.0 X-RAY
2006-02-21 THR D:65 U:64 12.0 0.086 E -104.0 129.4 3.0 0.021 0.065 A:P00749:0.064
HOH
3.012
OG1
O
2i9b 2 Q03405 98.56 0.0 X-RAY
2007-01-02 THR E:66 E:64 3.0 0.021 E -110.0 130.6 0.0 0.0 0.021 A:P00749:0.021
THR F:66 F:64 3.0 0.021 E -108.9 128.3 NA NA NA
THR G:66 G:64 11.0 0.079 E -111.5 111.7 NA NA NA
THR H:66 H:64 12.0 0.086 E -112.2 108.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 THR A:86 A:86 7.0 0.05 E -99.1 128.0