Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44169540 . G A CCDS33041.1:NM_001005376.2:c.238Cgg>Tgg_NP_001005376.1:p.80R>W Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 ARG A:58 A:58 71.0 0.316 E -67.4 141.6 47.0 0.209 0.107 I:Q9UMV0:0.107
 SO4
HOH
 2.894
4.358
 NH1
NE
 O3
O
ARG C:58 C:58 74.0 0.329 E -73.6 137.6 50.0 0.222 0.107 O:Q9UMV0:0.107
 SO4
HOH
 2.737
4.359
 NH2
CD
 O3
O
ARG E:58 E:58 84.0 0.373 E -45.9 140.1 48.0 0.213 0.16 M:Q9UMV0:0.16
 SO4
HOH
 2.780
3.963
 NH2
NE
 O2
O
ARG G:58 G:58 63.0 0.28 E -90.2 148.6 41.0 0.182 0.098 K:Q9UMV0:0.098
 SO4
HOH
 2.489
3.513
 NH2
NH2
 O2
O
ARG I:58 I:58 73.0 0.324 E -55.0 129.8 49.0 0.218 0.106 A:Q9UMV0:0.107
 SO4
HOH
 2.625
3.953
 NH1
CD
 O1
O
ARG K:58 K:58 65.0 0.289 E -56.9 143.4 36.0 0.16 0.129 G:Q9UMV0:0.129
 SO4
HOH
 2.731
3.223
 NH2
CD
 O2
O
ARG M:58 M:58 74.0 0.329 E -68.1 137.8 44.0 0.196 0.133 E:Q9UMV0:0.133
 SO4
HOH
 2.459
3.749
 NH1
NE
 O2
O
ARG O:58 O:58 72.0 0.32 E -55.9 145.4 32.0 0.142 0.178 C:Q9UMV0:0.178
 SO4
HOH
 2.533
3.003
 NH2
NH2
 O1
O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 ARG C:58 U:58 59.0 0.262 E -101.0 118.0 43.0 0.191 0.071 A:None:0.071
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 ARG C:60 U:58 62.0 0.276 E -96.2 131.9 32.0 0.142 0.134 B:P04004:0.133
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 ARG E:60 U:58 73.0 0.324 E -98.1 146.6 41.0 0.182 0.142 B:P04004:0.142
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 ARG E:60 U:58 56.0 0.249 E -120.3 112.9 56.0 0.249 0.0
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 ARG A:58 U:58 97.0 0.431 E -73.2 129.0 97.0 0.431 0.0
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 ARG A:58 U:58 46.0 0.204 E -95.0 137.8 46.0 0.204 0.0 HOH
 2.519
 NH1
 O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 ARG A:60 A:58 233.0 1.0 -80.5 97.3 122.0 0.542 0.458 B:Q03405:0.493
 NAG
 9.543
 O
 O7
ARG B:60 B:58 233.0 1.0 -84.9 108.3 127.0 0.564 0.436 A:Q03405:0.471
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 ARG A:60 NA:NA DO NA DO DO DO NA NA NA
ARG B:60 B:58 213.0 0.947 -133.6 164.9 213.0 0.947 0.0 NAG
 6.874
 C
 C8
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 ARG D:59 U:58 71.0 0.316 E -104.2 138.2 71.0 0.316 0.0 HOH
 2.888
 CB
 O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 ARG E:60 E:58 78.0 0.347 E -103.9 123.3 78.0 0.347 0.0
ARG F:60 F:58 78.0 0.347 E -103.2 121.1 NA NA NA
ARG G:60 G:58 76.0 0.338 E -76.6 125.2 NA NA NA
ARG H:60 H:58 79.0 0.351 E -77.1 125.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 ARG A:80 A:80 61.0 0.271 E -119.5 133.4