Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44171821 . C A CCDS33041.1:NM_001005376.2:c.78atG>atT_NP_001005376.1:p.26M>I Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
2005-05-10 MET A:4 A:4 42.0 0.227 E -82.7 145.4 5.0 0.027 0.2 H:None:0.157
G:Q9UMV0:0.103
HOH
4.491
CE
O
MET C:4 C:4 27.0 0.146 E -75.3 131.2 10.0 0.054 0.092 A:Q9UMV0:0.092
HOH
3.395
CG
O
MET E:4 E:4 35.0 0.189 E -73.6 137.1 4.0 0.022 0.167 C:Q9UMV0:0.038
D:None:0.146
HOH
5.559
CB
O
MET G:4 G:4 24.0 0.13 E -71.9 136.4 8.0 0.043 0.087 E:Q9UMV0:0.086
SO4
HOH
9.818
3.447
CE
CG
O2
O
MET I:4 I:4 23.0 0.124 E -72.8 132.3 8.0 0.043 0.081 O:Q9UMV0:0.081
SO4
HOH
9.670
3.508
CE
CG
O4
O
MET K:4 K:4 38.0 0.205 E -71.3 135.9 5.0 0.027 0.178 J:None:0.141
I:Q9UMV0:0.103
HOH
3.343
CE
O
MET M:4 M:4 15.0 0.081 E -75.6 144.7 7.0 0.038 0.043 K:Q9UMV0:0.043
HOH
5.161
CB
O
MET O:4 O:4 38.0 0.205 E -74.2 131.0 3.0 0.016 0.189 M:Q9UMV0:0.086
N:None:0.146
HOH
3.883
CG
O
4qti 3 Q03405 100.0 0.0 X-RAY
2015-02-25 MET C:4 U:4 41.0 0.222 E -55.4 140.0 41.0 0.222 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
2008-03-25 MET C:6 U:4 45.0 0.243 E -83.5 125.8 45.0 0.243 0.0
3bt2 5 Q03405 100.0 0.0 X-RAY
2008-03-25 MET E:6 U:4 17.0 0.092 E -62.0 140.8 17.0 0.092 0.0
4k24 5 Q03405 100.0 0.0 X-RAY
2014-02-26 MET E:6 U:4 30.0 0.162 E -123.9 154.6 30.0 0.162 0.0
3u73 1 Q03405 99.29 0.0 X-RAY
2012-04-18 MET A:4 U:4 20.0 0.108 E -90.2 115.0 20.0 0.108 0.0
3u74 1 Q03405 99.29 0.0 X-RAY
2012-04-18 MET A:4 U:4 39.0 0.211 E -68.5 138.0 39.0 0.211 0.0 HOH
3.546
CG
O
7e17 1 Q03405 100.0 0.0 X-RAY
2021-12-22 MET A:6 A:4 84.0 0.454 E -80.2 128.4 30.0 0.162 0.292 B:Q03405:0.292
MET B:6 B:4 80.0 0.432 E -75.3 129.2 31.0 0.168 0.264 A:Q03405:0.265
7v63 1 Q03405 100.0 0.0 X-RAY
2021-12-22 MET A:6 A:4 92.0 0.497 E -65.9 123.3 92.0 0.497 0.0
MET B:6 B:4 98.0 0.53 E -66.2 125.7 98.0 0.53 0.0
2fd6 4 Q03405 100.0 0.0 X-RAY
2006-02-21 MET D:5 U:4 16.0 0.086 E -75.2 135.7 16.0 0.086 0.0 HOH
5.976
CG
O
2i9b 2 Q03405 98.56 0.0 X-RAY
2007-01-02 MET E:6 E:4 23.0 0.124 E -116.5 129.9 23.0 0.124 0.0
MET F:6 F:4 24.0 0.13 E -114.4 128.7 NA NA NA
MET G:6 G:4 56.0 0.303 E -97.9 142.3 NA NA NA
MET H:6 H:4 57.0 0.308 E -99.0 140.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 MET A:26 A:26 24.0 0.13 E -73.3 127.6