Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 44171821 | . | C | A | CCDS33041.1:NM_001005376.2:c.78atG>atT_NP_001005376.1:p.26M>I | Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ywh | 1 | Q9UMV0 | 99.68 | 0.0 |
X-RAY |
2005-05-10 | MET | A:4 | A:4 | 42.0 | 0.227 | E | -82.7 | 145.4 | 5.0 | 0.027 | 0.2 |
H:None:0.157 G:Q9UMV0:0.103 |
HOH |
4.491 |
CE |
O |
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MET | C:4 | C:4 | 27.0 | 0.146 | E | -75.3 | 131.2 | 10.0 | 0.054 | 0.092 |
A:Q9UMV0:0.092 |
HOH |
3.395 |
CG |
O |
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MET | E:4 | E:4 | 35.0 | 0.189 | E | -73.6 | 137.1 | 4.0 | 0.022 | 0.167 |
C:Q9UMV0:0.038 D:None:0.146 |
HOH |
5.559 |
CB |
O |
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MET | G:4 | G:4 | 24.0 | 0.13 | E | -71.9 | 136.4 | 8.0 | 0.043 | 0.087 |
E:Q9UMV0:0.086 |
SO4 HOH |
9.818 3.447 |
CE CG |
O2 O |
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MET | I:4 | I:4 | 23.0 | 0.124 | E | -72.8 | 132.3 | 8.0 | 0.043 | 0.081 |
O:Q9UMV0:0.081 |
SO4 HOH |
9.670 3.508 |
CE CG |
O4 O |
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MET | K:4 | K:4 | 38.0 | 0.205 | E | -71.3 | 135.9 | 5.0 | 0.027 | 0.178 |
J:None:0.141 I:Q9UMV0:0.103 |
HOH |
3.343 |
CE |
O |
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MET | M:4 | M:4 | 15.0 | 0.081 | E | -75.6 | 144.7 | 7.0 | 0.038 | 0.043 |
K:Q9UMV0:0.043 |
HOH |
5.161 |
CB |
O |
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MET | O:4 | O:4 | 38.0 | 0.205 | E | -74.2 | 131.0 | 3.0 | 0.016 | 0.189 |
M:Q9UMV0:0.086 N:None:0.146 |
HOH |
3.883 |
CG |
O |
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4qti | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2015-02-25 | MET | C:4 | U:4 | 41.0 | 0.222 | E | -55.4 | 140.0 | 41.0 | 0.222 | 0.0 | ||||||
3bt1 | 3 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | MET | C:6 | U:4 | 45.0 | 0.243 | E | -83.5 | 125.8 | 45.0 | 0.243 | 0.0 | ||||||
3bt2 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2008-03-25 | MET | E:6 | U:4 | 17.0 | 0.092 | E | -62.0 | 140.8 | 17.0 | 0.092 | 0.0 | ||||||
4k24 | 5 | Q03405 | 100.0 | 0.0 |
X-RAY |
2014-02-26 | MET | E:6 | U:4 | 30.0 | 0.162 | E | -123.9 | 154.6 | 30.0 | 0.162 | 0.0 | ||||||
3u73 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | MET | A:4 | U:4 | 20.0 | 0.108 | E | -90.2 | 115.0 | 20.0 | 0.108 | 0.0 | ||||||
3u74 | 1 | Q03405 | 99.29 | 0.0 |
X-RAY |
2012-04-18 | MET | A:4 | U:4 | 39.0 | 0.211 | E | -68.5 | 138.0 | 39.0 | 0.211 | 0.0 |
HOH |
3.546 |
CG |
O |
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7e17 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | MET | A:6 | A:4 | 84.0 | 0.454 | E | -80.2 | 128.4 | 30.0 | 0.162 | 0.292 |
B:Q03405:0.292 |
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MET | B:6 | B:4 | 80.0 | 0.432 | E | -75.3 | 129.2 | 31.0 | 0.168 | 0.264 |
A:Q03405:0.265 |
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7v63 | 1 | Q03405 | 100.0 | 0.0 |
X-RAY |
2021-12-22 | MET | A:6 | A:4 | 92.0 | 0.497 | E | -65.9 | 123.3 | 92.0 | 0.497 | 0.0 | ||||||
MET | B:6 | B:4 | 98.0 | 0.53 | E | -66.2 | 125.7 | 98.0 | 0.53 | 0.0 | |||||||||||||
2fd6 | 4 | Q03405 | 100.0 | 0.0 |
X-RAY |
2006-02-21 | MET | D:5 | U:4 | 16.0 | 0.086 | E | -75.2 | 135.7 | 16.0 | 0.086 | 0.0 |
HOH |
5.976 |
CG |
O |
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2i9b | 2 | Q03405 | 98.56 | 0.0 |
X-RAY |
2007-01-02 | MET | E:6 | E:4 | 23.0 | 0.124 | E | -116.5 | 129.9 | 23.0 | 0.124 | 0.0 | ||||||
MET | F:6 | F:4 | 24.0 | 0.13 | E | -114.4 | 128.7 | NA | NA | NA | |||||||||||||
MET | G:6 | G:4 | 56.0 | 0.303 | E | -97.9 | 142.3 | NA | NA | NA | |||||||||||||
MET | H:6 | H:4 | 57.0 | 0.308 | E | -99.0 | 140.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q03405-f1 | 1 | Q03405 | 100.0 | 0.0 | MET | A:26 | A:26 | 24.0 | 0.13 | E | -73.3 | 127.6 |