Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783278 . G A CCDS12886.1:NM_005874.3:c.580Cac>Tac_NP_005865.2:p.194H>Y Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
2019-07-31 HIS A:171 A:172 6.0 0.031 E -138.9 155.0 6.0 0.031 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
2020-07-22 TYR B:203 B:172 11.0 0.048 E -138.0 142.3 11.0 0.048 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
2019-07-31 TYR G:171 G:172 32.0 0.139 E -105.0 152.9 32.0 0.139 0.0
TYR H:171 H:172 13.0 0.057 E -142.9 149.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
2018-09-05 HIS A:172 A:172 3.0 0.015 E -117.2 149.2 3.0 0.015 0.0 BEN
HOH
9.968
5.520
C
O
C5
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
2006-06-20 HIS A:171 A:172 9.0 0.046 E -136.7 150.7 9.0 0.046 0.0 HOH
2.820
NE2
O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
2006-11-07 HIS D:171 D:171 5.0 0.026 E -140.1 154.4 5.0 0.026 0.0 HOH
6.984
N
O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
2004-08-10 TYR A:172 A:172 11.0 0.048 E -136.7 160.3 11.0 0.048 0.0 HOH
2.680
OH
O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
2008-07-08 TYR C:172 D:172 13.0 0.057 E -138.8 158.7 13.0 0.057 0.0 HOH
5.043
CE2
O
TYR F:172 H:172 10.0 0.043 E -140.6 159.6 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
2019-11-27 TYR D:173 D:172 124.0 0.539 360.0 132.7 124.0 0.539 0.0
TYR H:173 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
2001-01-17 TYR A:171 A:172 9.0 0.039 E -136.7 155.6 9.0 0.039 0.0 HOH
2.833
OH
O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
2003-10-14 TYR D:171 D:172 8.0 0.035 E -131.5 179.2 8.0 0.035 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
2004-08-10 TYR A:171 A:172 11.0 0.048 E -127.8 159.3 11.0 0.048 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
2014-11-19 TYR D:169 D:172 10.0 0.043 E -130.9 163.3 10.0 0.043 0.0 HOH
7.186
CE1
O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 TYR D:169 D:172 6.0 0.026 E -136.4 153.0 6.0 0.026 0.0 HOH
6.863
O
O
TYR H:169 H:172 8.0 0.035 E -138.0 146.0 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
2018-11-07 TYR D:169 D:172 2.0 0.009 E -143.2 152.7 2.0 0.009 0.0
TYR H:169 H:172 4.0 0.017 E -143.3 152.3 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 TYR D:169 D:172 10.0 0.043 E -133.7 150.7 10.0 0.043 0.0 HOH
2.616
OH
O
TYR H:169 H:172 5.0 0.022 E -139.5 148.9 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
2005-08-02 TYR A:172 A:172 14.0 0.061 E -128.1 164.5 14.0 0.061 0.0 HOH
3.127
OH
O
TYR B:172 B:172 13.0 0.057 E -138.1 149.5 13.0 0.057 0.0 HOH
7.362
C
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 HIS A:194 A:194 4.0 0.021 E -133.5 145.8
af-o75019-f1 1 O75019 84.62 0.0 TYR A:195 A:195 12.0 0.052 E -132.2 143.4
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 TYR A:195 A:195 11.0 0.048 E -134.0 144.8