Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 54783278 | . | G | A | CCDS12886.1:NM_005874.3:c.580Cac>Tac_NP_005865.2:p.194H>Y | Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6aed | 1 | Q8N423 | 99.24 | 0.0 |
X-RAY |
2019-07-31 | HIS | A:171 | A:172 | 6.0 | 0.031 | E | -138.9 | 155.0 | 6.0 | 0.031 | 0.0 | ||||||
6zdx | 2 | A0A0G2JQ46 | 80.15 | 0.0 |
X-RAY |
2020-07-22 | TYR | B:203 | B:172 | 11.0 | 0.048 | E | -138.0 | 142.3 | 11.0 | 0.048 | 0.0 | ||||||
6aee | 4 | A0A0G2JQ44 | 80.61 | 0.0 |
X-RAY |
2019-07-31 | TYR | G:171 | G:172 | 32.0 | 0.139 | E | -105.0 | 152.9 | 32.0 | 0.139 | 0.0 | ||||||
TYR | H:171 | H:172 | 13.0 | 0.057 | E | -142.9 | 149.0 | NA | NA | NA | |||||||||||||
6bcs | 1 | A0A0G2JNQ7 | 99.49 | 3e-141 |
X-RAY |
2018-09-05 | HIS | A:172 | A:172 | 3.0 | 0.015 | E | -117.2 | 149.2 | 3.0 | 0.015 | 0.0 |
BEN HOH |
9.968 5.520 |
C O |
C5 O |
||
2gw5 | 1 | Q8N423 | 99.49 | 5e-141 |
X-RAY |
2006-06-20 | HIS | A:171 | A:172 | 9.0 | 0.046 | E | -136.7 | 150.7 | 9.0 | 0.046 | 0.0 |
HOH |
2.820 |
NE2 |
O |
||
2dyp | 4 | Q8N423 | 98.98 | 3e-139 |
X-RAY |
2006-11-07 | HIS | D:171 | D:171 | 5.0 | 0.026 | E | -140.1 | 154.4 | 5.0 | 0.026 | 0.0 |
HOH |
6.984 |
N |
O |
||
1ugn | 1 | Q8NHL6 | 81.31 | 7e-105 |
X-RAY |
2004-08-10 | TYR | A:172 | A:172 | 11.0 | 0.048 | E | -136.7 | 160.3 | 11.0 | 0.048 | 0.0 |
HOH |
2.680 |
OH |
O |
||
3d2u | 3 | Q8NHL6 | 80.81 | 3e-104 |
X-RAY |
2008-07-08 | TYR | C:172 | D:172 | 13.0 | 0.057 | E | -138.8 | 158.7 | 13.0 | 0.057 | 0.0 |
HOH |
5.043 |
CE2 |
O |
||
TYR | F:172 | H:172 | 10.0 | 0.043 | E | -140.6 | 159.6 | NA | NA | NA | |||||||||||||
6k60 | 4 | A0A0G2JQ44 | 81.12 | 6e-104 |
X-RAY |
2019-11-27 | TYR | D:173 | D:172 | 124.0 | 0.539 | 360.0 | 132.7 | 124.0 | 0.539 | 0.0 | |||||||
TYR | H:173 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
1g0x | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2001-01-17 | TYR | A:171 | A:172 | 9.0 | 0.039 | E | -136.7 | 155.6 | 9.0 | 0.039 | 0.0 |
HOH |
2.833 |
OH |
O |
||
1p7q | 4 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2003-10-14 | TYR | D:171 | D:172 | 8.0 | 0.035 | E | -131.5 | 179.2 | 8.0 | 0.035 | 0.0 | ||||||
1ufu | 1 | Q8NHL6 | 81.12 | 1e-103 |
X-RAY |
2004-08-10 | TYR | A:171 | A:172 | 11.0 | 0.048 | E | -127.8 | 159.3 | 11.0 | 0.048 | 0.0 | ||||||
4no0 | 4 | Q8NHL6 | 81.54 | 2e-103 |
X-RAY |
2014-11-19 | TYR | D:169 | D:172 | 10.0 | 0.043 | E | -130.9 | 163.3 | 10.0 | 0.043 | 0.0 |
HOH |
7.186 |
CE1 |
O |
||
6ewa | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | TYR | D:169 | D:172 | 6.0 | 0.026 | E | -136.4 | 153.0 | 6.0 | 0.026 | 0.0 |
HOH |
6.863 |
O |
O |
||
TYR | H:169 | H:172 | 8.0 | 0.035 | E | -138.0 | 146.0 | NA | NA | NA | |||||||||||||
6ewc | 4 | A0A0G2JQ44 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | TYR | D:169 | D:172 | 2.0 | 0.009 | E | -143.2 | 152.7 | 2.0 | 0.009 | 0.0 | ||||||
TYR | H:169 | H:172 | 4.0 | 0.017 | E | -143.3 | 152.3 | NA | NA | NA | |||||||||||||
6ewo | 4 | D9IDM8 | 81.54 | 2e-103 |
X-RAY |
2018-11-07 | TYR | D:169 | D:172 | 10.0 | 0.043 | E | -133.7 | 150.7 | 10.0 | 0.043 | 0.0 |
HOH |
2.616 |
OH |
O |
||
TYR | H:169 | H:172 | 5.0 | 0.022 | E | -139.5 | 148.9 | NA | NA | NA | |||||||||||||
1vdg | 1 | Q8NHL6 | 80.1 | 3e-102 |
X-RAY |
2005-08-02 | TYR | A:172 | A:172 | 14.0 | 0.061 | E | -128.1 | 164.5 | 14.0 | 0.061 | 0.0 |
HOH |
3.127 |
OH |
O |
||
TYR | B:172 | B:172 | 13.0 | 0.057 | E | -138.1 | 149.5 | 13.0 | 0.057 | 0.0 |
HOH |
7.362 |
C |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q8n423-f1 | 1 | Q8N423 | 100.0 | 0.0 | HIS | A:194 | A:194 | 4.0 | 0.021 | E | -133.5 | 145.8 | |
af-o75019-f1 | 1 | O75019 | 84.62 | 0.0 | TYR | A:195 | A:195 | 12.0 | 0.052 | E | -132.2 | 143.4 | |
af-q8n6c8-f1 | 1 | Q8N6C8 | 81.12 | 0.0 | TYR | A:195 | A:195 | 11.0 | 0.048 | E | -134.0 | 144.8 |