Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783325 . C A CCDS12886.1:NM_005874.3:c.533cGc>cTc_NP_005865.2:p.178R>L Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
2019-07-31 ARG A:155 A:156 144.0 0.64 E -146.9 151.0 144.0 0.64 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
2020-07-22 ARG B:187 B:156 94.0 0.418 E -154.8 142.8 94.0 0.418 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
2019-07-31 ARG G:155 G:156 154.0 0.684 E -153.0 139.0 154.0 0.684 0.0
ARG H:155 H:156 148.0 0.658 E -146.9 141.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
2018-09-05 ARG A:156 A:156 42.0 NA E -153.7 138.0 42.0 NA NA CL
HOH
4.590
2.801
O
O
CL
O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
2006-06-20 ARG A:155 A:156 121.0 0.538 E -153.2 156.8 121.0 0.538 0.0 HOH
2.548
NE
O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
2006-11-07 ARG D:155 D:155 118.0 0.524 E -153.0 162.3 115.0 0.511 0.013 A:P17693:0.013
HOH
4.090
NH2
O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
2004-08-10 ARG A:156 A:156 131.0 0.582 E -162.5 145.9 131.0 0.582 0.0 HOH
4.866
O
O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
2008-07-08 ARG C:156 D:156 41.0 NA E -163.2 159.1 41.0 NA NA HOH
6.255
CB
O
ARG F:156 H:156 80.0 NA 360.0 153.7 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
2019-11-27 ARG D:157 D:156 126.0 0.56 -163.4 166.1 126.0 0.56 0.0
ARG H:157 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
2001-01-17 ARG A:155 A:156 110.0 0.489 E -164.3 150.3 110.0 0.489 0.0 HOH
3.028
NH1
O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
2003-10-14 ARG D:155 D:156 100.0 0.444 E -128.2 113.3 100.0 0.444 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
2004-08-10 ARG A:155 A:156 140.0 0.622 E -150.8 153.5 140.0 0.622 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
2014-11-19 ARG D:153 D:156 89.0 0.396 E -140.2 126.3 89.0 0.396 0.0 HOH
2.320
NH1
O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 ARG D:153 D:156 87.0 0.387 E -152.5 125.1 87.0 0.387 0.0 HOH
9.345
N
O
ARG H:153 H:156 99.0 0.44 E -151.6 151.0 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
2018-11-07 ARG D:153 D:156 100.0 0.444 E -155.4 134.0 100.0 0.444 0.0
ARG H:153 H:156 98.0 0.436 E -156.8 133.2 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
2018-11-07 ARG D:153 D:156 92.0 0.409 E -141.6 128.0 92.0 0.409 0.0 HOH
2.719
NH1
O
ARG H:153 H:156 91.0 0.404 E -145.3 149.5 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
2005-08-02 ARG A:156 A:156 51.0 0.227 E -150.8 138.5 51.0 0.227 0.0 HOH
3.694
O
O
ARG B:156 B:156 104.0 0.462 E -147.2 156.1 104.0 0.462 0.0 HOH
7.409
NH2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 ARG A:178 A:178 142.0 0.631 E -147.3 157.7
af-o75019-f1 1 O75019 84.62 0.0 ARG A:179 A:179 124.0 0.551 E -154.6 152.8
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 ARG A:179 A:179 124.0 0.551 E -152.3 143.4